RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CXCL6P80162 114 aa4.99□□□□□ -1.61
PTCD2P1-201ENST00000554393 F8W1H4 67 aa4.97□□□□□ -1.61
PTCD2P1-201ENST00000554393 A0A1B0GV90 55 aa4.94□□□□□ -1.62
PTCD2P1-201ENST00000554393 C4orf26Q17RF5 130 aa4.91□□□□□ -1.62
PTCD2P1-201ENST00000554393 TP53AIP1Q9HCN2 124 aa4.9□□□□□ -1.63
PTCD2P1-201ENST00000554393 ETDBQ3ZM63 59 aa4.89□□□□□ -1.63
PTCD2P1-201ENST00000554393 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
PTCD2P1-201ENST00000554393 J3QR89 54 aa4.86□□□□□ -1.63
PTCD2P1-201ENST00000554393 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
PTCD2P1-201ENST00000554393 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
PTCD2P1-201ENST00000554393 ACYP1P07311 99 aa4.83□□□□□ -1.64
PTCD2P1-201ENST00000554393 C1orf64Q8NEQ6 169 aa4.83□□□□□ -1.64
PTCD2P1-201ENST00000554393 FAM240AA0A1B0GVK7 77 aa4.81□□□□□ -1.64
PTCD2P1-201ENST00000554393 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
PTCD2P1-201ENST00000554393 S4R3F8 94 aa4.81□□□□□ -1.64
PTCD2P1-201ENST00000554393 K7ERU9 68 aa4.8□□□□□ -1.64
PTCD2P1-201ENST00000554393 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
PTCD2P1-201ENST00000554393 ATP5EP2Q5VTU8 51 aa4.8□□□□□ -1.64
PTCD2P1-201ENST00000554393 CSAG1Q6PB30 78 aa4.79□□□□□ -1.64
PTCD2P1-201ENST00000554393 TRAV22A0A0B4J277 110 aa4.78□□□□□ -1.64
PTCD2P1-201ENST00000554393 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
PTCD2P1-201ENST00000554393 KMT2DO14686 5537 aa4.78□□□□□ -1.64
PTCD2P1-201ENST00000554393 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
PTCD2P1-201ENST00000554393 LOC101927531A0A1B0GV80 90 aa4.77□□□□□ -1.65
PTCD2P1-201ENST00000554393 LCA10Q71F78 164 aa4.77□□□□□ -1.65
PTCD2P1-201ENST00000554393 FAM236AA0A1B0GUQ0 79 aa4.75□□□□□ -1.65
PTCD2P1-201ENST00000554393 FAM236BA0A1B0GV22 79 aa4.75□□□□□ -1.65
PTCD2P1-201ENST00000554393 ATOX1O00244 68 aa4.72□□□□□ -1.65
PTCD2P1-201ENST00000554393 UQCRQO14949 82 aa4.72□□□□□ -1.65
PTCD2P1-201ENST00000554393 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
PTCD2P1-201ENST00000554393 HIST1H4AP62805 103 aaKnown RBP4.72□□□□□ -1.65
PTCD2P1-201ENST00000554393 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
PTCD2P1-201ENST00000554393 SPRR2GQ9BYE4 73 aa4.71□□□□□ -1.66
PTCD2P1-201ENST00000554393 LINC00643Q86TS7 51 aa4.7□□□□□ -1.66
PTCD2P1-201ENST00000554393 H0Y9P7 68 aa4.69□□□□□ -1.66
PTCD2P1-201ENST00000554393 KLKP1Q107X0 134 aa4.69□□□□□ -1.66
PTCD2P1-201ENST00000554393 KRTAP19-8Q3LI54 63 aa4.68□□□□□ -1.66
PTCD2P1-201ENST00000554393 Q5VV11 94 aa4.67□□□□□ -1.66
PTCD2P1-201ENST00000554393 MT1BP07438 61 aa4.66□□□□□ -1.66
PTCD2P1-201ENST00000554393 A0A087WVE0 104 aa4.65□□□□□ -1.67
PTCD2P1-201ENST00000554393 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
PTCD2P1-201ENST00000554393 A8MUN3 132 aa4.64□□□□□ -1.67
PTCD2P1-201ENST00000554393 H0YAA0 97 aa4.63□□□□□ -1.67
PTCD2P1-201ENST00000554393 IMUPQ9GZP8 106 aa4.63□□□□□ -1.67
PTCD2P1-201ENST00000554393 A6NN06 94 aa4.62□□□□□ -1.67
PTCD2P1-201ENST00000554393 NDUFC1O43677 76 aa4.62□□□□□ -1.67
PTCD2P1-201ENST00000554393 LINC00208Q96KT6 92 aa4.61□□□□□ -1.67
PTCD2P1-201ENST00000554393 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
PTCD2P1-201ENST00000554393 MP68P56378 58 aa4.6□□□□□ -1.67
PTCD2P1-201ENST00000554393 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
PTCD2P1-201ENST00000554393 H3BPC8 53 aa4.56□□□□□ -1.68
PTCD2P1-201ENST00000554393 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
PTCD2P1-201ENST00000554393 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
PTCD2P1-201ENST00000554393 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
PTCD2P1-201ENST00000554393 MT-ATP8P03928 68 aa4.51□□□□□ -1.69
PTCD2P1-201ENST00000554393 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
PTCD2P1-201ENST00000554393 SCGB1A1P11684 91 aa4.49□□□□□ -1.69
PTCD2P1-201ENST00000554393 SMIM20Q8N5G0 67 aa4.49□□□□□ -1.69
PTCD2P1-201ENST00000554393 DMAC1Q96GE9 116 aa4.49□□□□□ -1.69
PTCD2P1-201ENST00000554393 C20orf197Q8N268 126 aa4.46□□□□□ -1.7
PTCD2P1-201ENST00000554393 MT3P25713 68 aa4.42□□□□□ -1.7
PTCD2P1-201ENST00000554393 PRO2289Q9P1D8 64 aa4.42□□□□□ -1.7
PTCD2P1-201ENST00000554393 R4GN34 69 aa4.42□□□□□ -1.7
PTCD2P1-201ENST00000554393 TRAV7A0A075B6U4 112 aa4.41□□□□□ -1.7
PTCD2P1-201ENST00000554393 P0C880 135 aa4.41□□□□□ -1.7
PTCD2P1-201ENST00000554393 PLAC4Q8WY50 150 aa4.39□□□□□ -1.71
PTCD2P1-201ENST00000554393 M0QZ58 72 aa4.37□□□□□ -1.71
PTCD2P1-201ENST00000554393 ACYP2P14621 99 aa4.37□□□□□ -1.71
PTCD2P1-201ENST00000554393 MT1XP80297 61 aa4.37□□□□□ -1.71
PTCD2P1-201ENST00000554393 SERP2Q8N6R1 65 aa4.36□□□□□ -1.71
PTCD2P1-201ENST00000554393 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
PTCD2P1-201ENST00000554393 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
PTCD2P1-201ENST00000554393 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
PTCD2P1-201ENST00000554393 SPRR2EP22531 72 aa4.33□□□□□ -1.72
PTCD2P1-201ENST00000554393 SPRR2BP35325 72 aa4.33□□□□□ -1.72
PTCD2P1-201ENST00000554393 SPRR2AP35326 72 aa4.33□□□□□ -1.72
PTCD2P1-201ENST00000554393 COX7CP15954 63 aa4.32□□□□□ -1.72
PTCD2P1-201ENST00000554393 KRTAP12-2P59991 146 aa4.31□□□□□ -1.72
PTCD2P1-201ENST00000554393 LINC01554Q52M75 96 aa4.29□□□□□ -1.72
PTCD2P1-201ENST00000554393 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
PTCD2P1-201ENST00000554393 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
PTCD2P1-201ENST00000554393 SNURFQ9Y675 71 aa4.26□□□□□ -1.73
PTCD2P1-201ENST00000554393 SPRR2FQ96RM1 72 aa4.25□□□□□ -1.73
PTCD2P1-201ENST00000554393 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
PTCD2P1-201ENST00000554393 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
PTCD2P1-201ENST00000554393 SPRR2DP22532 72 aa4.2□□□□□ -1.74
PTCD2P1-201ENST00000554393 ATP5EP56381 51 aaPredicted RBP4.19□□□□□ -1.74
PTCD2P1-201ENST00000554393 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
PTCD2P1-201ENST00000554393 CCDC179H3BU77 68 aa4.17□□□□□ -1.74
PTCD2P1-201ENST00000554393 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
PTCD2P1-201ENST00000554393 TMEM258P61165 79 aa4.16□□□□□ -1.74
PTCD2P1-201ENST00000554393 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
PTCD2P1-201ENST00000554393 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
PTCD2P1-201ENST00000554393 H7BZZ5 65 aa4.15□□□□□ -1.75
PTCD2P1-201ENST00000554393 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
PTCD2P1-201ENST00000554393 COA5Q86WW8 74 aa4.11□□□□□ -1.75
PTCD2P1-201ENST00000554393 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
PTCD2P1-201ENST00000554393 SEC61GP60059 68 aa4.06□□□□□ -1.76
PTCD2P1-201ENST00000554393 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
PTCD2P1-201ENST00000554393 CYSTM1Q9H1C7 97 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms