RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 KLKP1Q107X0 134 aa9.25□□□□□ -0.93
HIF1A-206ENST00000553999 Q5VV11 94 aa9.25□□□□□ -0.93
HIF1A-206ENST00000553999 SYNE2Q8WXH0 6885 aaKnown RBP9.24□□□□□ -0.93
HIF1A-206ENST00000553999 LINC00208Q96KT6 92 aa9.22□□□□□ -0.93
HIF1A-206ENST00000553999 SPRR2GQ9BYE4 73 aa9.22□□□□□ -0.93
HIF1A-206ENST00000553999 A6NN06 94 aa9.18□□□□□ -0.94
HIF1A-206ENST00000553999 KRTAP19-8Q3LI54 63 aa9.17□□□□□ -0.94
HIF1A-206ENST00000553999 NDUFC1O43677 76 aa9.16□□□□□ -0.94
HIF1A-206ENST00000553999 OCR1Q9BZK8 76 aa9.13□□□□□ -0.95
HIF1A-206ENST00000553999 MP68P56378 58 aa9.12□□□□□ -0.95
HIF1A-206ENST00000553999 IMUPQ9GZP8 106 aa9.1□□□□□ -0.95
HIF1A-206ENST00000553999 A8MUN3 132 aa9.05□□□□□ -0.96
HIF1A-206ENST00000553999 KRTAP6-3Q3LI67 103 aa9.05□□□□□ -0.96
HIF1A-206ENST00000553999 ADM2Q7Z4H4 148 aa9.05□□□□□ -0.96
HIF1A-206ENST00000553999 J3QR89 54 aa9.03□□□□□ -0.96
HIF1A-206ENST00000553999 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
HIF1A-206ENST00000553999 KRTAP10-5P60370 271 aa9.01□□□□□ -0.97
HIF1A-206ENST00000553999 SCGB1A1P11684 91 aa9□□□□□ -0.97
HIF1A-206ENST00000553999 H0YAA0 97 aa8.96□□□□□ -0.98
HIF1A-206ENST00000553999 H3BPC8 53 aa8.89□□□□□ -0.99
HIF1A-206ENST00000553999 DMAC1Q96GE9 116 aa8.86□□□□□ -0.99
HIF1A-206ENST00000553999 MT-ATP8P03928 68 aa8.84□□□□□ -0.99
HIF1A-206ENST00000553999 P0C880 135 aa8.84□□□□□ -0.99
HIF1A-206ENST00000553999 R4GN34 69 aa8.78□□□□□ -1
HIF1A-206ENST00000553999 M0QZ58 72 aa8.76□□□□□ -1.01
HIF1A-206ENST00000553999 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
HIF1A-206ENST00000553999 LINC01554Q52M75 96 aa8.71□□□□□ -1.02
HIF1A-206ENST00000553999 C20orf197Q8N268 126 aa8.71□□□□□ -1.02
HIF1A-206ENST00000553999 K7ERU9 68 aa8.7□□□□□ -1.02
HIF1A-206ENST00000553999 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
HIF1A-206ENST00000553999 NEBP20929 6669 aa8.7□□□□□ -1.02
HIF1A-206ENST00000553999 TRAV7A0A075B6U4 112 aa8.68□□□□□ -1.02
HIF1A-206ENST00000553999 MT1XP80297 61 aa8.68□□□□□ -1.02
HIF1A-206ENST00000553999 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
HIF1A-206ENST00000553999 SNURFQ9Y675 71 aa8.64□□□□□ -1.03
HIF1A-206ENST00000553999 ACYP2P14621 99 aa8.63□□□□□ -1.03
HIF1A-206ENST00000553999 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
HIF1A-206ENST00000553999 KRTAP5-9P26371 169 aa8.6□□□□□ -1.03
HIF1A-206ENST00000553999 MUC12Q9UKN1 5478 aa8.59□□□□□ -1.03
HIF1A-206ENST00000553999 CHKB-CPT1BH3BT56 60 aa8.58□□□□□ -1.04
HIF1A-206ENST00000553999 SPTSSBQ8NFR3 76 aa8.52□□□□□ -1.05
HIF1A-206ENST00000553999 SPRR2FQ96RM1 72 aa8.49□□□□□ -1.05
HIF1A-206ENST00000553999 KMT2DO14686 5537 aa8.48□□□□□ -1.05
HIF1A-206ENST00000553999 KRTAP20-1Q3LI63 56 aa8.45□□□□□ -1.06
HIF1A-206ENST00000553999 KRTAP8-1Q8IUC2 63 aa8.44□□□□□ -1.06
HIF1A-206ENST00000553999 SERP2Q8N6R1 65 aa8.39□□□□□ -1.07
HIF1A-206ENST00000553999 MDN1Q9NU22 5596 aa8.37□□□□□ -1.07
HIF1A-206ENST00000553999 KRTAP4-8A0A0G2JLE6 195 aa8.37□□□□□ -1.07
HIF1A-206ENST00000553999 SPRR2EP22531 72 aa8.37□□□□□ -1.07
HIF1A-206ENST00000553999 SPRR2BP35325 72 aa8.37□□□□□ -1.07
HIF1A-206ENST00000553999 SPRR2AP35326 72 aa8.37□□□□□ -1.07
HIF1A-206ENST00000553999 KRTAP4-8Q9BYQ9 185 aa8.37□□□□□ -1.07
HIF1A-206ENST00000553999 KRTAP12-2P59991 146 aa8.36□□□□□ -1.07
HIF1A-206ENST00000553999 SPANXA2-OT1Q8N9U9 137 aa8.34□□□□□ -1.07
HIF1A-206ENST00000553999 KRTAP10-7P60409 375 aaPredicted RBP8.33□□□□□ -1.08
HIF1A-206ENST00000553999 KRTAP13-4Q3LI77 160 aa8.27□□□□□ -1.09
HIF1A-206ENST00000553999 COA5Q86WW8 74 aa8.24□□□□□ -1.09
HIF1A-206ENST00000553999 LCE1AQ5T7P2 110 aa8.19□□□□□ -1.1
HIF1A-206ENST00000553999 KRTAP10-12P60413 245 aa8.18□□□□□ -1.1
HIF1A-206ENST00000553999 KRTAP2-3P0C7H8 128 aa8.17□□□□□ -1.1
HIF1A-206ENST00000553999 KRTAP2-4Q9BYR9 128 aa8.17□□□□□ -1.1
HIF1A-206ENST00000553999 COX7CP15954 63 aa8.12□□□□□ -1.11
HIF1A-206ENST00000553999 CAMK2N1Q7Z7J9 78 aa8.12□□□□□ -1.11
HIF1A-206ENST00000553999 CYSTM1Q9H1C7 97 aa8.12□□□□□ -1.11
HIF1A-206ENST00000553999 A0A0D9SG42 100 aa8.1□□□□□ -1.11
HIF1A-206ENST00000553999 SPRR2DP22532 72 aa8.09□□□□□ -1.11
HIF1A-206ENST00000553999 SEC61GP60059 68 aa8.05□□□□□ -1.12
HIF1A-206ENST00000553999 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
HIF1A-206ENST00000553999 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
HIF1A-206ENST00000553999 H7BZZ5 65 aa8.01□□□□□ -1.13
HIF1A-206ENST00000553999 SPINT4Q6UDR6 99 aa7.94□□□□□ -1.14
HIF1A-206ENST00000553999 A0A1B0GU33 70 aa7.92□□□□□ -1.14
HIF1A-206ENST00000553999 KRTAP2-2Q9BYT5 123 aa7.9□□□□□ -1.14
HIF1A-206ENST00000553999 KRTAP2-1Q9BYU5 128 aa7.9□□□□□ -1.14
HIF1A-206ENST00000553999 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
HIF1A-206ENST00000553999 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
HIF1A-206ENST00000553999 KRTAP12-1P59990 96 aa7.81□□□□□ -1.16
HIF1A-206ENST00000553999 A0A1B0GU69 56 aa7.8□□□□□ -1.16
HIF1A-206ENST00000553999 CCDC179H3BU77 68 aa7.77□□□□□ -1.17
HIF1A-206ENST00000553999 A8MU10 97 aa7.75□□□□□ -1.17
HIF1A-206ENST00000553999 KRTAP19-7Q3SYF9 63 aa7.74□□□□□ -1.17
HIF1A-206ENST00000553999 MT1EP04732 61 aa7.69□□□□□ -1.18
HIF1A-206ENST00000553999 SMIM26A0A096LP01 95 aa7.67□□□□□ -1.18
HIF1A-206ENST00000553999 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
HIF1A-206ENST00000553999 KRTAP19-3Q7Z4W3 81 aa7.6□□□□□ -1.19
HIF1A-206ENST00000553999 LCE5AQ5TCM9 118 aa7.59□□□□□ -1.19
HIF1A-206ENST00000553999 ATP5EP56381 51 aaPredicted RBP7.53□□□□□ -1.2
HIF1A-206ENST00000553999 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
HIF1A-206ENST00000553999 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
HIF1A-206ENST00000553999 LCE3AQ5TA76 89 aa7.45□□□□□ -1.22
HIF1A-206ENST00000553999 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
HIF1A-206ENST00000553999 TNP1P09430 55 aa7.41□□□□□ -1.22
HIF1A-206ENST00000553999 DSTQ03001 7570 aaKnown RBP7.41□□□□□ -1.22
HIF1A-206ENST00000553999 MT1GP13640 62 aa7.37□□□□□ -1.23
HIF1A-206ENST00000553999 KRTAP4-9Q9BYQ8 210 aa7.37□□□□□ -1.23
HIF1A-206ENST00000553999 TMEM258P61165 79 aa7.36□□□□□ -1.23
HIF1A-206ENST00000553999 MT1LQ93083 61 aa7.35□□□□□ -1.23
HIF1A-206ENST00000553999 PP632Q6XCG6 107 aa7.33□□□□□ -1.24
HIF1A-206ENST00000553999 MT1MQ8N339 61 aa7.33□□□□□ -1.24
HIF1A-206ENST00000553999 KRTAP4-3Q9BYR4 195 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms