RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 KLKP1Q107X0 134 aa9.33□□□□□ -0.92
XRCC3-205ENST00000553807 KRTAP19-6Q3LI70 58 aa9.31□□□□□ -0.92
XRCC3-205ENST00000553807 SCGB1A1P11684 91 aa9.29□□□□□ -0.92
XRCC3-205ENST00000553807 A8MUN3 132 aa9.26□□□□□ -0.93
XRCC3-205ENST00000553807 NDUFC1O43677 76 aa9.24□□□□□ -0.93
XRCC3-205ENST00000553807 H3BPC8 53 aa9.21□□□□□ -0.94
XRCC3-205ENST00000553807 K7ERU9 68 aa9.2□□□□□ -0.94
XRCC3-205ENST00000553807 MT-ATP8P03928 68 aa9.19□□□□□ -0.94
XRCC3-205ENST00000553807 SPRR2GQ9BYE4 73 aa9.18□□□□□ -0.94
XRCC3-205ENST00000553807 KRTAP9-7A8MTY7 169 aa9.17□□□□□ -0.94
XRCC3-205ENST00000553807 IMUPQ9GZP8 106 aa9.17□□□□□ -0.94
XRCC3-205ENST00000553807 Q5VV11 94 aa9.14□□□□□ -0.95
XRCC3-205ENST00000553807 MT1BP07438 61 aa9.11□□□□□ -0.95
XRCC3-205ENST00000553807 KRTAP19-8Q3LI54 63 aa9.1□□□□□ -0.95
XRCC3-205ENST00000553807 MACF1Q9UPN3 7388 aaKnown RBP9.09□□□□□ -0.95
XRCC3-205ENST00000553807 H0YAA0 97 aa9.08□□□□□ -0.96
XRCC3-205ENST00000553807 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
XRCC3-205ENST00000553807 DMAC1Q96GE9 116 aa9.06□□□□□ -0.96
XRCC3-205ENST00000553807 ADM2Q7Z4H4 148 aa9.05□□□□□ -0.96
XRCC3-205ENST00000553807 TRAV7A0A075B6U4 112 aa9.02□□□□□ -0.97
XRCC3-205ENST00000553807 SMIM20Q8N5G0 67 aa9.02□□□□□ -0.97
XRCC3-205ENST00000553807 A6NN06 94 aa8.98□□□□□ -0.97
XRCC3-205ENST00000553807 SYNE2Q8WXH0 6885 aaKnown RBP8.97□□□□□ -0.97
XRCC3-205ENST00000553807 KRTAP10-5P60370 271 aa8.87□□□□□ -0.99
XRCC3-205ENST00000553807 SNURFQ9Y675 71 aa8.87□□□□□ -0.99
XRCC3-205ENST00000553807 P0C880 135 aa8.85□□□□□ -0.99
XRCC3-205ENST00000553807 ACYP2P14621 99 aa8.85□□□□□ -0.99
XRCC3-205ENST00000553807 C20orf197Q8N268 126 aa8.84□□□□□ -0.99
XRCC3-205ENST00000553807 R4GN34 69 aa8.8□□□□□ -1
XRCC3-205ENST00000553807 SERP2Q8N6R1 65 aa8.77□□□□□ -1.01
XRCC3-205ENST00000553807 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
XRCC3-205ENST00000553807 M0QZ58 72 aa8.76□□□□□ -1.01
XRCC3-205ENST00000553807 CHKB-CPT1BH3BT56 60 aa8.75□□□□□ -1.01
XRCC3-205ENST00000553807 KRTAP6-3Q3LI67 103 aa8.75□□□□□ -1.01
XRCC3-205ENST00000553807 SPTSSBQ8NFR3 76 aa8.74□□□□□ -1.01
XRCC3-205ENST00000553807 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
XRCC3-205ENST00000553807 SPANXA2-OT1Q8N9U9 137 aa8.67□□□□□ -1.02
XRCC3-205ENST00000553807 LINC01554Q52M75 96 aa8.65□□□□□ -1.02
XRCC3-205ENST00000553807 PRO2289Q9P1D8 64 aa8.61□□□□□ -1.03
XRCC3-205ENST00000553807 MT1XP80297 61 aa8.58□□□□□ -1.04
XRCC3-205ENST00000553807 COX7CP15954 63 aa8.53□□□□□ -1.04
XRCC3-205ENST00000553807 COA5Q86WW8 74 aa8.47□□□□□ -1.05
XRCC3-205ENST00000553807 NEBP20929 6669 aa8.46□□□□□ -1.06
XRCC3-205ENST00000553807 MUC12Q9UKN1 5478 aa8.45□□□□□ -1.06
XRCC3-205ENST00000553807 CYSTM1Q9H1C7 97 aa8.41□□□□□ -1.06
XRCC3-205ENST00000553807 KRTAP5-9P26371 169 aa8.4□□□□□ -1.06
XRCC3-205ENST00000553807 KMT2DO14686 5537 aa8.38□□□□□ -1.07
XRCC3-205ENST00000553807 H7BZZ5 65 aa8.37□□□□□ -1.07
XRCC3-205ENST00000553807 ANAPC13Q9BS18 74 aa8.33□□□□□ -1.08
XRCC3-205ENST00000553807 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
XRCC3-205ENST00000553807 KRTAP13-4Q3LI77 160 aa8.32□□□□□ -1.08
XRCC3-205ENST00000553807 SEC61GP60059 68 aa8.27□□□□□ -1.09
XRCC3-205ENST00000553807 MDN1Q9NU22 5596 aa8.27□□□□□ -1.09
XRCC3-205ENST00000553807 KRTAP8-1Q8IUC2 63 aa8.26□□□□□ -1.09
XRCC3-205ENST00000553807 SPRR2FQ96RM1 72 aa8.25□□□□□ -1.09
XRCC3-205ENST00000553807 SERP1Q9Y6X1 66 aa8.25□□□□□ -1.09
XRCC3-205ENST00000553807 KRTAP10-7P60409 375 aaPredicted RBP8.2□□□□□ -1.1
XRCC3-205ENST00000553807 KRTAP4-8A0A0G2JLE6 195 aa8.17□□□□□ -1.1
XRCC3-205ENST00000553807 KRTAP4-8Q9BYQ9 185 aa8.17□□□□□ -1.1
XRCC3-205ENST00000553807 CCDC179H3BU77 68 aa8.16□□□□□ -1.1
XRCC3-205ENST00000553807 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
XRCC3-205ENST00000553807 A0A0D9SG42 100 aa8.13□□□□□ -1.11
XRCC3-205ENST00000553807 KRTAP10-12P60413 245 aa8.13□□□□□ -1.11
XRCC3-205ENST00000553807 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
XRCC3-205ENST00000553807 A0A1B0GU33 70 aa8.1□□□□□ -1.11
XRCC3-205ENST00000553807 SPRR2EP22531 72 aa8.09□□□□□ -1.11
XRCC3-205ENST00000553807 SPRR2BP35325 72 aa8.09□□□□□ -1.11
XRCC3-205ENST00000553807 SPRR2AP35326 72 aa8.09□□□□□ -1.11
XRCC3-205ENST00000553807 KRTAP20-1Q3LI63 56 aa8.08□□□□□ -1.12
XRCC3-205ENST00000553807 A0A1B0GU69 56 aa8.04□□□□□ -1.12
XRCC3-205ENST00000553807 ATP5EP56381 51 aaPredicted RBP8□□□□□ -1.13
XRCC3-205ENST00000553807 SPINT4Q6UDR6 99 aa7.99□□□□□ -1.13
XRCC3-205ENST00000553807 LCE1AQ5T7P2 110 aa7.97□□□□□ -1.13
XRCC3-205ENST00000553807 KRTAP12-1P59990 96 aa7.92□□□□□ -1.14
XRCC3-205ENST00000553807 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
XRCC3-205ENST00000553807 KRTAP2-3P0C7H8 128 aa7.86□□□□□ -1.15
XRCC3-205ENST00000553807 KRTAP2-4Q9BYR9 128 aa7.86□□□□□ -1.15
XRCC3-205ENST00000553807 A8MU10 97 aa7.85□□□□□ -1.15
XRCC3-205ENST00000553807 TMEM258P61165 79 aa7.84□□□□□ -1.15
XRCC3-205ENST00000553807 PRR15LQ9BU68 103 aa7.84□□□□□ -1.15
XRCC3-205ENST00000553807 SPRR2DP22532 72 aa7.83□□□□□ -1.16
XRCC3-205ENST00000553807 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
XRCC3-205ENST00000553807 KRTAP19-7Q3SYF9 63 aa7.66□□□□□ -1.18
XRCC3-205ENST00000553807 KRTAP2-2Q9BYT5 123 aa7.62□□□□□ -1.19
XRCC3-205ENST00000553807 KRTAP2-1Q9BYU5 128 aa7.62□□□□□ -1.19
XRCC3-205ENST00000553807 MT1EP04732 61 aa7.6□□□□□ -1.19
XRCC3-205ENST00000553807 LCE3BQ5TA77 95 aa7.58□□□□□ -1.2
XRCC3-205ENST00000553807 UQCR11O14957 56 aa7.56□□□□□ -1.2
XRCC3-205ENST00000553807 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
XRCC3-205ENST00000553807 KRTAP19-5Q3LI72 72 aa7.53□□□□□ -1.2
XRCC3-205ENST00000553807 TNP1P09430 55 aa7.51□□□□□ -1.21
XRCC3-205ENST00000553807 KRTAP19-3Q7Z4W3 81 aa7.5□□□□□ -1.21
XRCC3-205ENST00000553807 LCE5AQ5TCM9 118 aa7.48□□□□□ -1.21
XRCC3-205ENST00000553807 LCE3AQ5TA76 89 aa7.44□□□□□ -1.22
XRCC3-205ENST00000553807 MIR22HGQ0VDD5 57 aa7.42□□□□□ -1.22
XRCC3-205ENST00000553807 PSPHP1O15172 72 aa7.38□□□□□ -1.23
XRCC3-205ENST00000553807 V9GYY9 64 aa7.38□□□□□ -1.23
XRCC3-205ENST00000553807 Q1T7F1 81 aa7.32□□□□□ -1.24
XRCC3-205ENST00000553807 MT1GP13640 62 aa7.31□□□□□ -1.24
XRCC3-205ENST00000553807 PP632Q6XCG6 107 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms