RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 IMUPQ9GZP8 106 aa7.81□□□□□ -1.16
SYNE2-211ENST00000553801 NAA38Q9BRA0 125 aaKnown RBP7.8□□□□□ -1.16
SYNE2-211ENST00000553801 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
SYNE2-211ENST00000553801 LCA10Q71F78 164 aa7.79□□□□□ -1.16
SYNE2-211ENST00000553801 C1orf64Q8NEQ6 169 aa7.77□□□□□ -1.17
SYNE2-211ENST00000553801 Q8N9L7 120 aa7.72□□□□□ -1.17
SYNE2-211ENST00000553801 CRIPTQ9P021 101 aa7.71□□□□□ -1.18
SYNE2-211ENST00000553801 PRO0461Q9UI25 63 aa7.68□□□□□ -1.18
SYNE2-211ENST00000553801 SPRR2FQ96RM1 72 aa7.66□□□□□ -1.18
SYNE2-211ENST00000553801 H3BT86 120 aa7.65□□□□□ -1.18
SYNE2-211ENST00000553801 SPRR2EP22531 72 aa7.65□□□□□ -1.18
SYNE2-211ENST00000553801 SPRR2BP35325 72 aa7.65□□□□□ -1.18
SYNE2-211ENST00000553801 SPRR2AP35326 72 aa7.65□□□□□ -1.18
SYNE2-211ENST00000553801 ETDBQ3ZM63 59 aa7.65□□□□□ -1.18
SYNE2-211ENST00000553801 FAM240AA0A1B0GVK7 77 aa7.58□□□□□ -1.2
SYNE2-211ENST00000553801 ANAPC13Q9BS18 74 aa7.56□□□□□ -1.2
SYNE2-211ENST00000553801 KRTAP2-2Q9BYT5 123 aa7.56□□□□□ -1.2
SYNE2-211ENST00000553801 KRTAP2-1Q9BYU5 128 aa7.56□□□□□ -1.2
SYNE2-211ENST00000553801 PRO2289Q9P1D8 64 aa7.55□□□□□ -1.2
SYNE2-211ENST00000553801 ACYP1P07311 99 aa7.54□□□□□ -1.2
SYNE2-211ENST00000553801 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
SYNE2-211ENST00000553801 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
SYNE2-211ENST00000553801 UBL5Q9BZL1 73 aa7.5□□□□□ -1.21
SYNE2-211ENST00000553801 MT-ATP8P03928 68 aa7.48□□□□□ -1.21
SYNE2-211ENST00000553801 LCE1AQ5T7P2 110 aa7.47□□□□□ -1.21
SYNE2-211ENST00000553801 A0A087WVE0 104 aa7.45□□□□□ -1.22
SYNE2-211ENST00000553801 H0YAA0 97 aa7.44□□□□□ -1.22
SYNE2-211ENST00000553801 CYP4F30PQ9H0H9 118 aa7.44□□□□□ -1.22
SYNE2-211ENST00000553801 MT1XP80297 61 aa7.43□□□□□ -1.22
SYNE2-211ENST00000553801 A8MUN3 132 aa7.42□□□□□ -1.22
SYNE2-211ENST00000553801 NDUFC1O43677 76 aa7.41□□□□□ -1.22
SYNE2-211ENST00000553801 SPRR2DP22532 72 aa7.41□□□□□ -1.22
SYNE2-211ENST00000553801 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
SYNE2-211ENST00000553801 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
SYNE2-211ENST00000553801 LINC00643Q86TS7 51 aa7.37□□□□□ -1.23
SYNE2-211ENST00000553801 LOC101927531A0A1B0GV80 90 aa7.34□□□□□ -1.23
SYNE2-211ENST00000553801 UQCRQO14949 82 aa7.34□□□□□ -1.23
SYNE2-211ENST00000553801 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.23
SYNE2-211ENST00000553801 RPS28P62857 69 aaKnown RBP7.31□□□□□ -1.24
SYNE2-211ENST00000553801 TRAV22A0A0B4J277 110 aa7.3□□□□□ -1.24
SYNE2-211ENST00000553801 ATOX1O00244 68 aa7.3□□□□□ -1.24
SYNE2-211ENST00000553801 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
SYNE2-211ENST00000553801 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
SYNE2-211ENST00000553801 COX7CP15954 63 aa7.24□□□□□ -1.25
SYNE2-211ENST00000553801 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
SYNE2-211ENST00000553801 ATP5EP2Q5VTU8 51 aa7.24□□□□□ -1.25
SYNE2-211ENST00000553801 SMIM20Q8N5G0 67 aa7.24□□□□□ -1.25
SYNE2-211ENST00000553801 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
SYNE2-211ENST00000553801 TMEM258P61165 79 aa7.22□□□□□ -1.25
SYNE2-211ENST00000553801 HIST1H4AP62805 103 aaKnown RBP7.22□□□□□ -1.25
SYNE2-211ENST00000553801 R4GN34 69 aa7.22□□□□□ -1.25
SYNE2-211ENST00000553801 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
SYNE2-211ENST00000553801 KRTAP4-6Q9BYQ5 205 aa7.16□□□□□ -1.26
SYNE2-211ENST00000553801 C20orf197Q8N268 126 aa7.15□□□□□ -1.26
SYNE2-211ENST00000553801 SERP2Q8N6R1 65 aa7.15□□□□□ -1.26
SYNE2-211ENST00000553801 H0Y9P7 68 aa7.12□□□□□ -1.27
SYNE2-211ENST00000553801 M0QZ58 72 aa7.12□□□□□ -1.27
SYNE2-211ENST00000553801 P0C880 135 aa7.08□□□□□ -1.28
SYNE2-211ENST00000553801 KRTAP10-7P60409 375 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-211ENST00000553801 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
SYNE2-211ENST00000553801 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-211ENST00000553801 LINC01554Q52M75 96 aa7.05□□□□□ -1.28
SYNE2-211ENST00000553801 GPR98Q8WXG9 6306 aa7.04□□□□□ -1.28
SYNE2-211ENST00000553801 TRAV7A0A075B6U4 112 aa6.97□□□□□ -1.29
SYNE2-211ENST00000553801 LINC00208Q96KT6 92 aa6.97□□□□□ -1.29
SYNE2-211ENST00000553801 SERP1Q9Y6X1 66 aa6.97□□□□□ -1.29
SYNE2-211ENST00000553801 SMIM26A0A096LP01 95 aa6.9□□□□□ -1.3
SYNE2-211ENST00000553801 MP68P56378 58 aa6.89□□□□□ -1.31
SYNE2-211ENST00000553801 DSTQ03001 7570 aaKnown RBP6.87□□□□□ -1.31
SYNE2-211ENST00000553801 PRO0628Q9UI54 55 aa6.87□□□□□ -1.31
SYNE2-211ENST00000553801 H7BZZ5 65 aa6.84□□□□□ -1.31
SYNE2-211ENST00000553801 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
SYNE2-211ENST00000553801 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
SYNE2-211ENST00000553801 CYSTM1Q9H1C7 97 aa6.77□□□□□ -1.33
SYNE2-211ENST00000553801 OCR1Q9BZK8 76 aa6.76□□□□□ -1.33
SYNE2-211ENST00000553801 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
SYNE2-211ENST00000553801 H3BPC8 53 aa6.72□□□□□ -1.33
SYNE2-211ENST00000553801 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
SYNE2-211ENST00000553801 V9GYY9 64 aa6.67□□□□□ -1.34
SYNE2-211ENST00000553801 KRTAP19-7Q3SYF9 63 aa6.64□□□□□ -1.35
SYNE2-211ENST00000553801 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
SYNE2-211ENST00000553801 MT1EP04732 61 aa6.62□□□□□ -1.35
SYNE2-211ENST00000553801 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
SYNE2-211ENST00000553801 SNURFQ9Y675 71 aa6.61□□□□□ -1.35
SYNE2-211ENST00000553801 ACYP2P14621 99 aa6.6□□□□□ -1.35
SYNE2-211ENST00000553801 Q1T7F1 81 aa6.6□□□□□ -1.35
SYNE2-211ENST00000553801 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
SYNE2-211ENST00000553801 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
SYNE2-211ENST00000553801 BRK1Q8WUW1 75 aa6.54□□□□□ -1.36
SYNE2-211ENST00000553801 SPANXA2-OT1Q8N9U9 137 aa6.52□□□□□ -1.37
SYNE2-211ENST00000553801 HMCN1Q96RW7 5635 aa6.5□□□□□ -1.37
SYNE2-211ENST00000553801 MT4P47944 62 aa6.5□□□□□ -1.37
SYNE2-211ENST00000553801 MT1GP13640 62 aa6.48□□□□□ -1.37
SYNE2-211ENST00000553801 CHKB-CPT1BH3BT56 60 aa6.47□□□□□ -1.37
SYNE2-211ENST00000553801 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
SYNE2-211ENST00000553801 AHNAK2Q8IVF2 5795 aa6.45□□□□□ -1.38
SYNE2-211ENST00000553801 PMAIP1Q13794 54 aa6.43□□□□□ -1.38
SYNE2-211ENST00000553801 SEC61GP60059 68 aa6.42□□□□□ -1.38
SYNE2-211ENST00000553801 KRTAP13-4Q3LI77 160 aa6.42□□□□□ -1.38
SYNE2-211ENST00000553801 A0A0D9SG42 100 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms