RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 NBPF19A0A087WUL8 3843 aa0.96□□□□□ -2.26
TDP1-207ENST00000553617 LAMA1P25391 3075 aa0.96□□□□□ -2.26
TDP1-207ENST00000553617 LOC400499M0QZD8 3231 aa0.96□□□□□ -2.26
TDP1-207ENST00000553617 BRCA2P51587 3418 aa0.96□□□□□ -2.26
TDP1-207ENST00000553617 TNP1P09430 55 aa0.96□□□□□ -2.26
TDP1-207ENST00000553617 LAMA5O15230 3695 aa0.96□□□□□ -2.26
TDP1-207ENST00000553617 DMXL2Q8TDJ6 3036 aa0.96□□□□□ -2.26
TDP1-207ENST00000553617 ANKHD1Q8IWZ3 2542 aaKnown RBP0.95□□□□□ -2.26
TDP1-207ENST00000553617 LRBAP50851 2863 aa0.95□□□□□ -2.26
TDP1-207ENST00000553617 VPS13BQ7Z7G8 4022 aa0.95□□□□□ -2.26
TDP1-207ENST00000553617 ATMQ13315 3056 aa0.95□□□□□ -2.26
TDP1-207ENST00000553617 DNAH8Q96JB1 4490 aa0.95□□□□□ -2.26
TDP1-207ENST00000553617 C9orf92A6NGG3 77 aa0.94□□□□□ -2.26
TDP1-207ENST00000553617 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
TDP1-207ENST00000553617 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
TDP1-207ENST00000553617 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
TDP1-207ENST00000553617 KMT2AQ03164 3969 aa0.94□□□□□ -2.26
TDP1-207ENST00000553617 MTORP42345 2549 aa0.94□□□□□ -2.26
TDP1-207ENST00000553617 ZNF469Q96JG9 3925 aaPredicted RBP0.94□□□□□ -2.26
TDP1-207ENST00000553617 PTPN13Q12923 2485 aa0.94□□□□□ -2.26
TDP1-207ENST00000553617 SPTAN1Q13813 2472 aaKnown RBP0.94□□□□□ -2.26
TDP1-207ENST00000553617 SPG11Q96JI7 2443 aa0.94□□□□□ -2.26
TDP1-207ENST00000553617 HIVEP1P15822 2718 aa0.94□□□□□ -2.26
TDP1-207ENST00000553617 FCGBPQ9Y6R7 5405 aaPredicted RBP0.94□□□□□ -2.26
TDP1-207ENST00000553617 DEFB4AO15263 64 aa0.93□□□□□ -2.26
TDP1-207ENST00000553617 SMG1Q96Q15 3661 aaKnown RBP0.93□□□□□ -2.26
TDP1-207ENST00000553617 MAP1AP78559 2803 aaPredicted RBP0.93□□□□□ -2.26
TDP1-207ENST00000553617 CDH23Q9H251 3354 aa0.93□□□□□ -2.26
TDP1-207ENST00000553617 ZFYVE26Q68DK2 2539 aa0.92□□□□□ -2.26
TDP1-207ENST00000553617 ITPR1Q14643 2758 aa0.92□□□□□ -2.26
TDP1-207ENST00000553617 TNXBP22105 4242 aa0.92□□□□□ -2.26
TDP1-207ENST00000553617 NSD1Q96L73 2696 aaPredicted RBP0.92□□□□□ -2.26
TDP1-207ENST00000553617 NCOR2Q9Y618 2525 aa0.92□□□□□ -2.26
TDP1-207ENST00000553617 DYNC2H1Q8NCM8 4307 aaKnown RBP0.91□□□□□ -2.26
TDP1-207ENST00000553617 ASPMQ8IZT6 3477 aa0.91□□□□□ -2.26
TDP1-207ENST00000553617 ANKRD11Q6UB99 2663 aaPredicted RBP0.91□□□□□ -2.26
TDP1-207ENST00000553617 SONP18583 2426 aaKnown RBP0.91□□□□□ -2.26
TDP1-207ENST00000553617 FRAS1Q86XX4 4008 aa0.91□□□□□ -2.26
TDP1-207ENST00000553617 TLN1Q9Y490 2541 aaKnown RBP0.91□□□□□ -2.26
TDP1-207ENST00000553617 ZANQ9Y493 2812 aa0.9□□□□□ -2.26
TDP1-207ENST00000553617 COL7A1Q02388 2944 aa0.9□□□□□ -2.26
TDP1-207ENST00000553617 ACANP16112 2415 aa0.9□□□□□ -2.27
TDP1-207ENST00000553617 DNAH2Q9P225 4427 aa0.9□□□□□ -2.27
TDP1-207ENST00000553617 HRNRQ86YZ3 2850 aaPredicted RBP0.9□□□□□ -2.27
TDP1-207ENST00000553617 MYO15AQ9UKN7 3530 aa0.89□□□□□ -2.27
TDP1-207ENST00000553617 FLNBO75369 2602 aaKnown RBP0.89□□□□□ -2.27
TDP1-207ENST00000553617 TLN2Q9Y4G6 2542 aa0.89□□□□□ -2.27
TDP1-207ENST00000553617 MXRA5Q9NR99 2828 aa0.88□□□□□ -2.27
TDP1-207ENST00000553617 DNAH3Q8TD57 4116 aa0.88□□□□□ -2.27
TDP1-207ENST00000553617 DNAH1Q9P2D7 4330 aa0.88□□□□□ -2.27
TDP1-207ENST00000553617 HUWE1Q7Z6Z7 4374 aaKnown RBP0.88□□□□□ -2.27
TDP1-207ENST00000553617 RPS29P62273 56 aaKnown RBP0.88□□□□□ -2.27
TDP1-207ENST00000553617 PKD1P98161 4303 aa0.88□□□□□ -2.27
TDP1-207ENST00000553617 HECTD4Q9Y4D8 3996 aa0.87□□□□□ -2.27
TDP1-207ENST00000553617 NOTCH1P46531 2555 aa0.87□□□□□ -2.27
TDP1-207ENST00000553617 MUC3AQ02505 3323 aa0.87□□□□□ -2.27
TDP1-207ENST00000553617 PRM1P04553 51 aa0.87□□□□□ -2.27
TDP1-207ENST00000553617 TRRAPQ9Y4A5 3859 aa0.87□□□□□ -2.27
TDP1-207ENST00000553617 MYO9AB2RTY4 2548 aa0.86□□□□□ -2.27
TDP1-207ENST00000553617 ANK3Q12955 4377 aaKnown RBP0.86□□□□□ -2.27
TDP1-207ENST00000553617 ADGRG4Q8IZF6 3080 aa0.86□□□□□ -2.27
TDP1-207ENST00000553617 USP9XQ93008 2570 aaPredicted RBP0.86□□□□□ -2.27
TDP1-207ENST00000553617 STAB1Q9NY15 2570 aa0.86□□□□□ -2.27
TDP1-207ENST00000553617 PKHD1L1Q86WI1 4243 aa0.85□□□□□ -2.27
TDP1-207ENST00000553617 CACNA1AO00555 2505 aa0.85□□□□□ -2.27
TDP1-207ENST00000553617 CUBNO60494 3623 aa0.85□□□□□ -2.27
TDP1-207ENST00000553617 DNAH7Q8WXX0 4024 aa0.85□□□□□ -2.27
TDP1-207ENST00000553617 DOPEY1Q5JWR5 2465 aa0.84□□□□□ -2.27
TDP1-207ENST00000553617 NIPBLQ6KC79 2804 aaeCLIP0.84□□□□□ -2.27
TDP1-207ENST00000553617 TEP1Q99973 2627 aaKnown RBP0.84□□□□□ -2.27
TDP1-207ENST00000553617 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
TDP1-207ENST00000553617 MYO18BQ8IUG5 2567 aa0.84□□□□□ -2.28
TDP1-207ENST00000553617 CSMD2Q7Z408 3487 aa0.84□□□□□ -2.28
TDP1-207ENST00000553617 ACACBO00763 2458 aa0.83□□□□□ -2.28
TDP1-207ENST00000553617 SVEP1Q4LDE5 3571 aa0.83□□□□□ -2.28
TDP1-207ENST00000553617 HSPG2P98160 4391 aa0.83□□□□□ -2.28
TDP1-207ENST00000553617 FASNP49327 2511 aaKnown RBP0.83□□□□□ -2.28
TDP1-207ENST00000553617 FLGP20930 4061 aaPredicted RBP0.83□□□□□ -2.28
TDP1-207ENST00000553617 CFAP46Q8IYW2 2715 aa0.82□□□□□ -2.28
TDP1-207ENST00000553617 EYSQ5T1H1 3165 aa0.82□□□□□ -2.28
TDP1-207ENST00000553617 ITPR2Q14571 2701 aa0.81□□□□□ -2.28
TDP1-207ENST00000553617 DNAH9Q9NYC9 4486 aa0.81□□□□□ -2.28
TDP1-207ENST00000553617 TEX15Q9BXT5 2789 aa0.81□□□□□ -2.28
TDP1-207ENST00000553617 DNAH17Q9UFH2 4485 aa0.81□□□□□ -2.28
TDP1-207ENST00000553617 FAT3Q8TDW7 4589 aa0.8□□□□□ -2.28
TDP1-207ENST00000553617 VPS13CQ709C8 3753 aa0.8□□□□□ -2.28
TDP1-207ENST00000553617 CENPEQ02224 2701 aa0.8□□□□□ -2.28
TDP1-207ENST00000553617 STAB2Q8WWQ8 2551 aa0.8□□□□□ -2.28
TDP1-207ENST00000553617 MAST4O15021 2626 aa0.8□□□□□ -2.28
TDP1-207ENST00000553617 TGP01266 2768 aa0.79□□□□□ -2.28
TDP1-207ENST00000553617 TENM3Q9P273 2699 aa0.79□□□□□ -2.28
TDP1-207ENST00000553617 DNAH10Q8IVF4 4471 aa0.78□□□□□ -2.28
TDP1-207ENST00000553617 KRTAP8-1Q8IUC2 63 aa0.78□□□□□ -2.28
TDP1-207ENST00000553617 DNAH6Q9C0G6 4158 aa0.78□□□□□ -2.28
TDP1-207ENST00000553617 APOBP04114 4563 aaKnown RBP0.77□□□□□ -2.29
TDP1-207ENST00000553617 CMYA5Q8N3K9 4069 aa0.76□□□□□ -2.29
TDP1-207ENST00000553617 NBEAL1Q6ZS30 2694 aa0.75□□□□□ -2.29
TDP1-207ENST00000553617 FLNAP21333 2647 aaKnown RBP0.75□□□□□ -2.29
TDP1-207ENST00000553617 LRP1Q07954 4544 aaKnown RBP0.75□□□□□ -2.29
TDP1-207ENST00000553617 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms