RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 CLASP1Q7Z460 1538 aa-0.02□□□□□ -2.41
PCNX4-206ENST00000553513 CRYBG3Q68DQ2 2970 aa-0.02□□□□□ -2.41
PCNX4-206ENST00000553513 SMIM31A0A1B0GVY4 71 aa-0.02□□□□□ -2.41
PCNX4-206ENST00000553513 LINC01549A6NIU2 74 aa-0.02□□□□□ -2.41
PCNX4-206ENST00000553513 DEFB106AQ8N104 65 aa-0.02□□□□□ -2.41
PCNX4-206ENST00000553513 TMEM167BQ9NRX6 74 aa-0.02□□□□□ -2.41
PCNX4-206ENST00000553513 S4R3F8 94 aa-0.02□□□□□ -2.41
PCNX4-206ENST00000553513 MYO15AQ9UKN7 3530 aa-0.02□□□□□ -2.41
PCNX4-206ENST00000553513 DMXL2Q8TDJ6 3036 aa-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 MMP24-AS1A0A0U1RRL7 71 aa-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 MT1AP04731 61 aa-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 FCER1GP30273 86 aa-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 ABRACLQ9P1F3 81 aa-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 STARD9Q9P2P6 4700 aa-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 ERICH3Q5RHP9 1530 aa-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 MGAQ8IWI9 3026 aa-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 MUC3AQ02505 3323 aa-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 SPENQ96T58 3664 aaKnown RBP-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 SPTBN5Q9NRC6 3674 aaKnown RBP-0.03□□□□□ -2.41
PCNX4-206ENST00000553513 FREM2Q5SZK8 3169 aa-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 APOBP04114 4563 aaKnown RBP-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 PKHD1L1Q86WI1 4243 aa-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 DNAH6Q9C0G6 4158 aa-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 H0YGX0 51 aa-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 RPS27P42677 84 aaKnown RBP-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 KRTAP20-2Q3LI61 65 aa-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 RPS27LQ71UM5 84 aaKnown RBP-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 UGGT1Q9NYU2 1555 aa-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 MAST1Q9Y2H9 1570 aa-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 VPS13DQ5THJ4 4388 aa-0.04□□□□□ -2.42
PCNX4-206ENST00000553513 ADGRG4Q8IZF6 3080 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 FAM208AQ9UK61 1670 aaKnown RBP-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 CENPEQ02224 2701 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 BRCA2P51587 3418 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 IGLV5-48A0A075B6I7 105 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 M0R1W7 72 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 KRTAP6-2Q3LI66 62 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 KRTAP19-7Q3SYF9 63 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 FAT1Q14517 4588 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 EEA1Q15075 1411 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 FRYLO94915 3013 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 ABCA5Q8WWZ7 1642 aa-0.05□□□□□ -2.42
PCNX4-206ENST00000553513 CSMD2Q7Z408 3487 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 ASPMQ8IZT6 3477 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 SACSQ9NZJ4 4579 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 GLI2P10070 1586 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 DYNC1H1Q14204 4646 aaKnown RBP-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 DNAH1Q9P2D7 4330 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 DDX60Q8IY21 1712 aaKnown RBP-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 LOC400499M0QZD8 3231 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 A8MTW9 85 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 TNP1P09430 55 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 DEFB110Q30KQ9 67 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 SPRR2FQ96RM1 72 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 CFAP54Q96N23 3096 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 PREX2Q70Z35 1606 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 ADCY10Q96PN6 1610 aa-0.06□□□□□ -2.42
PCNX4-206ENST00000553513 SMIM27A0A1W2PRY6 76 aa-0.07□□□□□ -2.42
PCNX4-206ENST00000553513 M0QZ58 72 aa-0.07□□□□□ -2.42
PCNX4-206ENST00000553513 SFTA3P0C7M3 94 aa-0.07□□□□□ -2.42
PCNX4-206ENST00000553513 FRYQ5TBA9 3013 aa-0.07□□□□□ -2.42
PCNX4-206ENST00000553513 CPS1P31327 1500 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 DNAH11Q96DT5 4516 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 LMO7Q8WWI1 1683 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 PRXQ9BXM0 1461 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 CENPFP49454 3210 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 IGIPA6NJ69 53 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 M0QY20 66 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 SMR3BP02814 79 aaPredicted RBP-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 CLPSL2Q6UWE3 100 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 LINC00308Q8TCZ7 52 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 DNAH14Q0VDD8 3507 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 USP34Q70CQ2 3546 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 WDFY3Q8IZQ1 3526 aa-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 ANK3Q12955 4377 aaKnown RBP-0.08□□□□□ -2.42
PCNX4-206ENST00000553513 CHD7Q9P2D1 2997 aa-0.09□□□□□ -2.42
PCNX4-206ENST00000553513 TRIOO75962 3097 aa-0.09□□□□□ -2.42
PCNX4-206ENST00000553513 VPS13CQ709C8 3753 aa-0.09□□□□□ -2.42
PCNX4-206ENST00000553513 PLNP26678 52 aa-0.09□□□□□ -2.42
PCNX4-206ENST00000553513 MROH2AA6NES4 1674 aa-0.09□□□□□ -2.42
PCNX4-206ENST00000553513 SYCP2Q9BX26 1530 aa-0.09□□□□□ -2.42
PCNX4-206ENST00000553513 KIF21BO75037 1637 aa-0.09□□□□□ -2.42
PCNX4-206ENST00000553513 CMYA5Q8N3K9 4069 aa-0.1□□□□□ -2.42
PCNX4-206ENST00000553513 DNAH2Q9P225 4427 aa-0.1□□□□□ -2.43
PCNX4-206ENST00000553513 DNAH7Q8WXX0 4024 aa-0.1□□□□□ -2.43
PCNX4-206ENST00000553513 ATMQ13315 3056 aa-0.1□□□□□ -2.43
PCNX4-206ENST00000553513 DEFB131AP59861 70 aa-0.1□□□□□ -2.43
PCNX4-206ENST00000553513 KRTAP19-8Q3LI54 63 aa-0.1□□□□□ -2.43
PCNX4-206ENST00000553513 AGLP35573 1532 aa-0.1□□□□□ -2.43
PCNX4-206ENST00000553513 UTRNP46939 3433 aa-0.1□□□□□ -2.43
PCNX4-206ENST00000553513 ABCC8Q09428 1581 aa-0.11□□□□□ -2.43
PCNX4-206ENST00000553513 DNAH8Q96JB1 4490 aa-0.11□□□□□ -2.43
PCNX4-206ENST00000553513 PRUNE2Q8WUY3 3088 aa-0.11□□□□□ -2.43
PCNX4-206ENST00000553513 VPS13AQ96RL7 3174 aa-0.11□□□□□ -2.43
PCNX4-206ENST00000553513 EFCAB6Q5THR3 1501 aa-0.11□□□□□ -2.43
PCNX4-206ENST00000553513 CDH23Q9H251 3354 aa-0.11□□□□□ -2.43
PCNX4-206ENST00000553513 NRXN3Q9Y4C0 1643 aa-0.11□□□□□ -2.43
PCNX4-206ENST00000553513 CMC2Q9NRP2 79 aa-0.11□□□□□ -2.43
PCNX4-206ENST00000553513 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.11□□□□□ -2.43
PCNX4-206ENST00000553513 DNAH5Q8TE73 4624 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms