RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 LRP2P98164 4655 aa2.49□□□□□ -2.01
ATXN3-220ENST00000553491 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
ATXN3-220ENST00000553491 ATP5EP56381 51 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-220ENST00000553491 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
ATXN3-220ENST00000553491 NDUFB1O75438 58 aa2.48□□□□□ -2.01
ATXN3-220ENST00000553491 RPL37P61927 97 aaKnown RBP2.48□□□□□ -2.01
ATXN3-220ENST00000553491 NREPQ16612 68 aa2.48□□□□□ -2.01
ATXN3-220ENST00000553491 KRTAP4-1Q9BYQ7 146 aa2.48□□□□□ -2.01
ATXN3-220ENST00000553491 KLKP1Q107X0 134 aa2.47□□□□□ -2.01
ATXN3-220ENST00000553491 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
ATXN3-220ENST00000553491 LINC00472Q9H8W2 130 aa2.47□□□□□ -2.01
ATXN3-220ENST00000553491 HMCN2Q8NDA2 5059 aa2.47□□□□□ -2.01
ATXN3-220ENST00000553491 A0A1B0GVX0 72 aa2.46□□□□□ -2.02
ATXN3-220ENST00000553491 C5orf47Q569G3 176 aa2.46□□□□□ -2.02
ATXN3-220ENST00000553491 A0A087WVE0 104 aa2.45□□□□□ -2.02
ATXN3-220ENST00000553491 SERP1Q9Y6X1 66 aa2.45□□□□□ -2.02
ATXN3-220ENST00000553491 FAM236DA0A1B0GTK5 79 aa2.44□□□□□ -2.02
ATXN3-220ENST00000553491 NDUFS5O43920 106 aa2.44□□□□□ -2.02
ATXN3-220ENST00000553491 FAM236CP0DP71 79 aa2.44□□□□□ -2.02
ATXN3-220ENST00000553491 A8MUU9 505 aa2.43□□□□□ -2.02
ATXN3-220ENST00000553491 C8orf87E5RJ46 101 aa2.43□□□□□ -2.02
ATXN3-220ENST00000553491 H7BZZ5 65 aa2.43□□□□□ -2.02
ATXN3-220ENST00000553491 M0R2T5 61 aa2.43□□□□□ -2.02
ATXN3-220ENST00000553491 BPY2O14599 106 aa2.43□□□□□ -2.02
ATXN3-220ENST00000553491 C20orf197Q8N268 126 aa2.43□□□□□ -2.02
ATXN3-220ENST00000553491 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
ATXN3-220ENST00000553491 A8MWP4 228 aa2.42□□□□□ -2.02
ATXN3-220ENST00000553491 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
ATXN3-220ENST00000553491 C8orf17Q9NRJ1 99 aa2.42□□□□□ -2.02
ATXN3-220ENST00000553491 WFDC13Q8IUB5 93 aa2.41□□□□□ -2.02
ATXN3-220ENST00000553491 TMEM254Q8TBM7 123 aa2.41□□□□□ -2.02
ATXN3-220ENST00000553491 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
ATXN3-220ENST00000553491 PRR15Q8IV56 129 aa2.4□□□□□ -2.03
ATXN3-220ENST00000553491 CYSTM1Q9H1C7 97 aa2.4□□□□□ -2.03
ATXN3-220ENST00000553491 RNF213Q63HN8 5207 aa2.39□□□□□ -2.03
ATXN3-220ENST00000553491 hDV103S1A0JD37 113 aa2.39□□□□□ -2.03
ATXN3-220ENST00000553491 K7EQZ3 153 aa2.39□□□□□ -2.03
ATXN3-220ENST00000553491 ZCCHC13Q8WW36 166 aaKnown RBP2.39□□□□□ -2.03
ATXN3-220ENST00000553491 MRPL34Q9BQ48 92 aaKnown RBP2.39□□□□□ -2.03
ATXN3-220ENST00000553491 RBM12B-AS1Q9P1G2 102 aa2.39□□□□□ -2.03
ATXN3-220ENST00000553491 H3BPC8 53 aa2.38□□□□□ -2.03
ATXN3-220ENST00000553491 Q5W150 140 aa2.38□□□□□ -2.03
ATXN3-220ENST00000553491 CASC2Q6XLA1 102 aa2.38□□□□□ -2.03
ATXN3-220ENST00000553491 MMP24-AS1A0A0U1RRL7 71 aa2.37□□□□□ -2.03
ATXN3-220ENST00000553491 HCG22E2RYF7 251 aa2.37□□□□□ -2.03
ATXN3-220ENST00000553491 SPINK7P58062 85 aa2.37□□□□□ -2.03
ATXN3-220ENST00000553491 MT1HP80294 61 aa2.36□□□□□ -2.03
ATXN3-220ENST00000553491 CYP4F30PQ9H0H9 118 aa2.36□□□□□ -2.03
ATXN3-220ENST00000553491 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
ATXN3-220ENST00000553491 SNURFQ9Y675 71 aa2.36□□□□□ -2.03
ATXN3-220ENST00000553491 V9GYY9 64 aa2.36□□□□□ -2.03
ATXN3-220ENST00000553491 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
ATXN3-220ENST00000553491 C4orf26Q17RF5 130 aa2.35□□□□□ -2.03
ATXN3-220ENST00000553491 MP68P56378 58 aa2.34□□□□□ -2.03
ATXN3-220ENST00000553491 KRTAP19-2Q3LHN2 52 aa2.34□□□□□ -2.03
ATXN3-220ENST00000553491 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
ATXN3-220ENST00000553491 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
ATXN3-220ENST00000553491 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
ATXN3-220ENST00000553491 MUC2Q02817 5179 aa2.34□□□□□ -2.04
ATXN3-220ENST00000553491 HRES1P13985 223 aa2.33□□□□□ -2.04
ATXN3-220ENST00000553491 Q1T7F1 81 aa2.33□□□□□ -2.04
ATXN3-220ENST00000553491 TP53AIP1Q9HCN2 124 aa2.32□□□□□ -2.04
ATXN3-220ENST00000553491 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
ATXN3-220ENST00000553491 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
ATXN3-220ENST00000553491 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
ATXN3-220ENST00000553491 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
ATXN3-220ENST00000553491 FAT4Q6V0I7 4981 aa2.29□□□□□ -2.04
ATXN3-220ENST00000553491 H1FX-AS1Q4G0G2 97 aa2.28□□□□□ -2.04
ATXN3-220ENST00000553491 H0Y9P7 68 aa2.27□□□□□ -2.05
ATXN3-220ENST00000553491 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
ATXN3-220ENST00000553491 KRTAP10-10P60014 251 aa2.26□□□□□ -2.05
ATXN3-220ENST00000553491 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
ATXN3-220ENST00000553491 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
ATXN3-220ENST00000553491 SPRR5A0A1B0GTR4 108 aa2.24□□□□□ -2.05
ATXN3-220ENST00000553491 S4R3F8 94 aa2.23□□□□□ -2.05
ATXN3-220ENST00000553491 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
ATXN3-220ENST00000553491 MT2AP02795 61 aa2.21□□□□□ -2.06
ATXN3-220ENST00000553491 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
ATXN3-220ENST00000553491 Q5VV11 94 aa2.21□□□□□ -2.06
ATXN3-220ENST00000553491 CSAG1Q6PB30 78 aa2.21□□□□□ -2.06
ATXN3-220ENST00000553491 COA5Q86WW8 74 aa2.21□□□□□ -2.06
ATXN3-220ENST00000553491 FLGP20930 4061 aaPredicted RBP2.21□□□□□ -2.06
ATXN3-220ENST00000553491 A8MUN3 132 aa2.2□□□□□ -2.06
ATXN3-220ENST00000553491 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
ATXN3-220ENST00000553491 CRCT1Q9UGL9 99 aa2.2□□□□□ -2.06
ATXN3-220ENST00000553491 CHKB-CPT1BH3BT56 60 aa2.19□□□□□ -2.06
ATXN3-220ENST00000553491 PSPHP1O15172 72 aa2.19□□□□□ -2.06
ATXN3-220ENST00000553491 MT1FP04733 61 aa2.19□□□□□ -2.06
ATXN3-220ENST00000553491 ACYP2P14621 99 aa2.19□□□□□ -2.06
ATXN3-220ENST00000553491 LCA10Q71F78 164 aa2.19□□□□□ -2.06
ATXN3-220ENST00000553491 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
ATXN3-220ENST00000553491 PRR15LQ9BU68 103 aa2.18□□□□□ -2.06
ATXN3-220ENST00000553491 A6NED7 52 aa2.17□□□□□ -2.06
ATXN3-220ENST00000553491 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
ATXN3-220ENST00000553491 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
ATXN3-220ENST00000553491 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
ATXN3-220ENST00000553491 A6NN06 94 aa2.13□□□□□ -2.07
ATXN3-220ENST00000553491 ADM2Q7Z4H4 148 aa2.12□□□□□ -2.07
ATXN3-220ENST00000553491 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
ATXN3-220ENST00000553491 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms