RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 TRBV7-6A0A0J9YX20 115 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 K7ERS5 55 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 TRGC2P03986 189 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 FABP4P15090 132 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BOP23527 126 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BBP33778 126 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BDP58876 126 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BCP62807 126 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 HIST2H2BEQ16778 126 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.52□□□□□ -2.17
ATXN3-217ENST00000553287 Q6JHZ5 121 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 PRR15Q8IV56 129 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BHQ93079 126 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BNQ99877 126 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BMQ99879 126 aa1.52□□□□□ -2.17
ATXN3-217ENST00000553287 TRAV13-2A0A0B4J235 113 aa1.51□□□□□ -2.17
ATXN3-217ENST00000553287 A6NED7 52 aa1.51□□□□□ -2.17
ATXN3-217ENST00000553287 IGKCP01834 107 aa1.51□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H4AP62805 103 aaKnown RBP1.51□□□□□ -2.17
ATXN3-217ENST00000553287 LINC00575Q6W349 94 aa1.51□□□□□ -2.17
ATXN3-217ENST00000553287 TAX1BP3O14907 124 aa1.5□□□□□ -2.17
ATXN3-217ENST00000553287 FABP2P12104 132 aa1.5□□□□□ -2.17
ATXN3-217ENST00000553287 RBM3P98179 157 aaKnown RBP1.5□□□□□ -2.17
ATXN3-217ENST00000553287 H1FX-AS1Q4G0G2 97 aa1.5□□□□□ -2.17
ATXN3-217ENST00000553287 LCA10Q71F78 164 aa1.5□□□□□ -2.17
ATXN3-217ENST00000553287 MUSTN1Q8IVN3 82 aa1.5□□□□□ -2.17
ATXN3-217ENST00000553287 ATOH7Q8N100 152 aa1.5□□□□□ -2.17
ATXN3-217ENST00000553287 SNHG12Q9BXW3 62 aa1.5□□□□□ -2.17
ATXN3-217ENST00000553287 SPRR2GQ9BYE4 73 aa1.5□□□□□ -2.17
ATXN3-217ENST00000553287 NHP2Q9NX24 153 aaKnown RBP1.5□□□□□ -2.17
ATXN3-217ENST00000553287 hADV29S1A0JD25 119 aa1.49□□□□□ -2.17
ATXN3-217ENST00000553287 ZNF815PA8K554 130 aa1.49□□□□□ -2.17
ATXN3-217ENST00000553287 PLNP26678 52 aa1.49□□□□□ -2.17
ATXN3-217ENST00000553287 TMEM258P61165 79 aa1.49□□□□□ -2.17
ATXN3-217ENST00000553287 BRK1Q8WUW1 75 aa1.49□□□□□ -2.17
ATXN3-217ENST00000553287 A0A0B4J2C4 111 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 H3BQ85 93 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BKO60814 126 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 TIMM17BO60830 172 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 LEPROTL1O95214 131 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BJP06899 126 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 HSD52Q0P140 79 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 LINC01545Q5VT33 79 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 TEN1Q86WV5 123 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 SVBPQ8N300 66 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 RAB37Q96AX2 223 aa1.48□□□□□ -2.17
ATXN3-217ENST00000553287 CHCHD1Q96BP2 118 aaKnown RBP1.48□□□□□ -2.17
ATXN3-217ENST00000553287 H3BMG7 143 aa1.47□□□□□ -2.17
ATXN3-217ENST00000553287 C3orf79P0CE67 100 aa1.47□□□□□ -2.17
ATXN3-217ENST00000553287 MT4P47944 62 aa1.47□□□□□ -2.17
ATXN3-217ENST00000553287 KRTAP25-1Q3LHN0 102 aa1.47□□□□□ -2.17
ATXN3-217ENST00000553287 HIST3H2BBQ8N257 126 aa1.47□□□□□ -2.17
ATXN3-217ENST00000553287 HIST1H2BLQ99880 126 aa1.47□□□□□ -2.17
ATXN3-217ENST00000553287 TMEM256-PLSCR3K7ERE1 68 aa1.46□□□□□ -2.18
ATXN3-217ENST00000553287 UQCRQO14949 82 aa1.46□□□□□ -2.18
ATXN3-217ENST00000553287 IFITM1P13164 125 aa1.46□□□□□ -2.18
ATXN3-217ENST00000553287 MT1XP80297 61 aa1.46□□□□□ -2.18
ATXN3-217ENST00000553287 LINC01554Q52M75 96 aa1.46□□□□□ -2.18
ATXN3-217ENST00000553287 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.46□□□□□ -2.18
ATXN3-217ENST00000553287 C7orf65Q6ZTY9 151 aa1.45□□□□□ -2.18
ATXN3-217ENST00000553287 LINC00472Q9H8W2 130 aa1.45□□□□□ -2.18
ATXN3-217ENST00000553287 PYY3Q5JQD4 70 aa1.44□□□□□ -2.18
ATXN3-217ENST00000553287 VAMP8Q9BV40 100 aa1.44□□□□□ -2.18
ATXN3-217ENST00000553287 A0A1B0GU33 70 aa1.43□□□□□ -2.18
ATXN3-217ENST00000553287 SYS1-DBNDD2H3BUS1 97 aa1.43□□□□□ -2.18
ATXN3-217ENST00000553287 KLKP1Q107X0 134 aa1.43□□□□□ -2.18
ATXN3-217ENST00000553287 C2orf91Q6ZV80 131 aa1.43□□□□□ -2.18
ATXN3-217ENST00000553287 SERP1Q9Y6X1 66 aa1.43□□□□□ -2.18
ATXN3-217ENST00000553287 IGKV3D-7A0A0C4DH55 119 aa1.42□□□□□ -2.18
ATXN3-217ENST00000553287 H3BT86 120 aa1.42□□□□□ -2.18
ATXN3-217ENST00000553287 CCDC179H3BU77 68 aa1.42□□□□□ -2.18
ATXN3-217ENST00000553287 TRACP01848 142 aa1.42□□□□□ -2.18
ATXN3-217ENST00000553287 ATP5EP56381 51 aaPredicted RBP1.42□□□□□ -2.18
ATXN3-217ENST00000553287 CLLU1Q5K131 121 aa1.42□□□□□ -2.18
ATXN3-217ENST00000553287 NAA38Q9BRA0 125 aaKnown RBP1.42□□□□□ -2.18
ATXN3-217ENST00000553287 K7ERJ3 54 aa1.41□□□□□ -2.18
ATXN3-217ENST00000553287 SNCGO76070 127 aa1.41□□□□□ -2.18
ATXN3-217ENST00000553287 APOC3P02656 99 aa1.41□□□□□ -2.18
ATXN3-217ENST00000553287 PPDPFLQ8WWR9 84 aa1.41□□□□□ -2.18
ATXN3-217ENST00000553287 S4R3F8 94 aa1.41□□□□□ -2.18
ATXN3-217ENST00000553287 TRBV7-4A0A0J9YYF1 115 aa1.4□□□□□ -2.19
ATXN3-217ENST00000553287 CCKP06307 115 aa1.4□□□□□ -2.19
ATXN3-217ENST00000553287 A0A087WVE0 104 aa1.39□□□□□ -2.19
ATXN3-217ENST00000553287 H3BPC8 53 aa1.39□□□□□ -2.19
ATXN3-217ENST00000553287 FXYD2P54710 66 aa1.39□□□□□ -2.19
ATXN3-217ENST00000553287 KRTDAPP60985 99 aa1.39□□□□□ -2.19
ATXN3-217ENST00000553287 BVES-AS1Q5T3Y7 98 aa1.39□□□□□ -2.19
ATXN3-217ENST00000553287 CSAG1Q6PB30 78 aa1.39□□□□□ -2.19
ATXN3-217ENST00000553287 PRO2289Q9P1D8 64 aa1.39□□□□□ -2.19
ATXN3-217ENST00000553287 TRAV7A0A075B6U4 112 aa1.38□□□□□ -2.19
ATXN3-217ENST00000553287 F8W1H4 67 aa1.38□□□□□ -2.19
ATXN3-217ENST00000553287 K7EP34 96 aa1.38□□□□□ -2.19
ATXN3-217ENST00000553287 COX7CP15954 63 aa1.38□□□□□ -2.19
ATXN3-217ENST00000553287 DSCR8Q96T75 97 aa1.38□□□□□ -2.19
ATXN3-217ENST00000553287 C14orf132Q9NPU4 83 aa1.38□□□□□ -2.19
ATXN3-217ENST00000553287 UQCR10Q9UDW1 63 aa1.38□□□□□ -2.19
ATXN3-217ENST00000553287 hDV103S1A0JD37 113 aa1.37□□□□□ -2.19
ATXN3-217ENST00000553287 K7EQZ3 153 aa1.37□□□□□ -2.19
ATXN3-217ENST00000553287 MMP24-AS1A0A0U1RRL7 71 aa1.36□□□□□ -2.19
ATXN3-217ENST00000553287 ATOX1O00244 68 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms