RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
DDX54-210ENST00000552375 FAM236AA0A1B0GUQ0 79 aa6.48□□□□□ -1.37
DDX54-210ENST00000552375 FAM236BA0A1B0GV22 79 aa6.48□□□□□ -1.37
DDX54-210ENST00000552375 KLKP1Q107X0 134 aa6.48□□□□□ -1.37
DDX54-210ENST00000552375 MP68P56378 58 aa6.47□□□□□ -1.37
DDX54-210ENST00000552375 MT-ATP8P03928 68 aa6.46□□□□□ -1.38
DDX54-210ENST00000552375 SCGB1A1P11684 91 aa6.46□□□□□ -1.38
DDX54-210ENST00000552375 CSAG1Q6PB30 78 aa6.46□□□□□ -1.38
DDX54-210ENST00000552375 K7ERU9 68 aa6.45□□□□□ -1.38
DDX54-210ENST00000552375 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
DDX54-210ENST00000552375 A8MUN3 132 aa6.34□□□□□ -1.39
DDX54-210ENST00000552375 H3BPC8 53 aa6.34□□□□□ -1.39
DDX54-210ENST00000552375 NDUFC1O43677 76 aa6.33□□□□□ -1.4
DDX54-210ENST00000552375 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
DDX54-210ENST00000552375 MT1BP07438 61 aa6.29□□□□□ -1.4
DDX54-210ENST00000552375 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
DDX54-210ENST00000552375 Q5VV11 94 aa6.28□□□□□ -1.4
DDX54-210ENST00000552375 TRAV7A0A075B6U4 112 aa6.27□□□□□ -1.41
DDX54-210ENST00000552375 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.41
DDX54-210ENST00000552375 DMAC1Q96GE9 116 aa6.26□□□□□ -1.41
DDX54-210ENST00000552375 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
DDX54-210ENST00000552375 A6NN06 94 aa6.24□□□□□ -1.41
DDX54-210ENST00000552375 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
DDX54-210ENST00000552375 SNURFQ9Y675 71 aa6.22□□□□□ -1.41
DDX54-210ENST00000552375 H0YAA0 97 aa6.18□□□□□ -1.42
DDX54-210ENST00000552375 CRIPTQ9P021 101 aa6.18□□□□□ -1.42
DDX54-210ENST00000552375 MUC12Q9UKN1 5478 aa6.17□□□□□ -1.42
DDX54-210ENST00000552375 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
DDX54-210ENST00000552375 NEBP20929 6669 aa6.15□□□□□ -1.42
DDX54-210ENST00000552375 C20orf197Q8N268 126 aa6.14□□□□□ -1.43
DDX54-210ENST00000552375 P0C880 135 aa6.11□□□□□ -1.43
DDX54-210ENST00000552375 ACYP2P14621 99 aa6.11□□□□□ -1.43
DDX54-210ENST00000552375 SERP2Q8N6R1 65 aa6.11□□□□□ -1.43
DDX54-210ENST00000552375 CHKB-CPT1BH3BT56 60 aa6.06□□□□□ -1.44
DDX54-210ENST00000552375 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
DDX54-210ENST00000552375 KMT2DO14686 5537 aa6.04□□□□□ -1.44
DDX54-210ENST00000552375 M0QZ58 72 aa6.03□□□□□ -1.44
DDX54-210ENST00000552375 R4GN34 69 aa6.03□□□□□ -1.44
DDX54-210ENST00000552375 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
DDX54-210ENST00000552375 SPTSSBQ8NFR3 76 aa6□□□□□ -1.45
DDX54-210ENST00000552375 COX7CP15954 63 aa5.98□□□□□ -1.45
DDX54-210ENST00000552375 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
DDX54-210ENST00000552375 LINC01554Q52M75 96 aa5.97□□□□□ -1.45
DDX54-210ENST00000552375 CYSTM1Q9H1C7 97 aa5.93□□□□□ -1.46
DDX54-210ENST00000552375 COA5Q86WW8 74 aa5.91□□□□□ -1.46
DDX54-210ENST00000552375 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
DDX54-210ENST00000552375 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
DDX54-210ENST00000552375 MT1XP80297 61 aa5.89□□□□□ -1.47
DDX54-210ENST00000552375 ANAPC13Q9BS18 74 aa5.87□□□□□ -1.47
DDX54-210ENST00000552375 H7BZZ5 65 aa5.85□□□□□ -1.47
DDX54-210ENST00000552375 KRTAP20-1Q3LI63 56 aa5.84□□□□□ -1.47
DDX54-210ENST00000552375 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
DDX54-210ENST00000552375 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
DDX54-210ENST00000552375 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
DDX54-210ENST00000552375 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
DDX54-210ENST00000552375 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
DDX54-210ENST00000552375 SPRR2FQ96RM1 72 aa5.77□□□□□ -1.49
DDX54-210ENST00000552375 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
DDX54-210ENST00000552375 SPRR2EP22531 72 aa5.7□□□□□ -1.5
DDX54-210ENST00000552375 SPRR2BP35325 72 aa5.7□□□□□ -1.5
DDX54-210ENST00000552375 SPRR2AP35326 72 aa5.7□□□□□ -1.5
DDX54-210ENST00000552375 SEC61GP60059 68 aa5.7□□□□□ -1.5
DDX54-210ENST00000552375 SERP1Q9Y6X1 66 aa5.7□□□□□ -1.5
DDX54-210ENST00000552375 A0A0D9SG42 100 aa5.65□□□□□ -1.5
DDX54-210ENST00000552375 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
DDX54-210ENST00000552375 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
DDX54-210ENST00000552375 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
DDX54-210ENST00000552375 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
DDX54-210ENST00000552375 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
DDX54-210ENST00000552375 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
DDX54-210ENST00000552375 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
DDX54-210ENST00000552375 A0A1B0GU33 70 aa5.6□□□□□ -1.51
DDX54-210ENST00000552375 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.51
DDX54-210ENST00000552375 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
DDX54-210ENST00000552375 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
DDX54-210ENST00000552375 A0A1B0GU69 56 aa5.58□□□□□ -1.52
DDX54-210ENST00000552375 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
DDX54-210ENST00000552375 SPRR2DP22532 72 aa5.51□□□□□ -1.53
DDX54-210ENST00000552375 TMEM258P61165 79 aa5.51□□□□□ -1.53
DDX54-210ENST00000552375 A8MU10 97 aa5.48□□□□□ -1.53
DDX54-210ENST00000552375 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
DDX54-210ENST00000552375 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
DDX54-210ENST00000552375 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
DDX54-210ENST00000552375 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
DDX54-210ENST00000552375 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
DDX54-210ENST00000552375 LINC01558Q9Y6Z2 57 aa5.41□□□□□ -1.54
DDX54-210ENST00000552375 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
DDX54-210ENST00000552375 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
DDX54-210ENST00000552375 UQCR11O14957 56 aa5.25□□□□□ -1.57
DDX54-210ENST00000552375 MT1EP04732 61 aa5.24□□□□□ -1.57
DDX54-210ENST00000552375 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
DDX54-210ENST00000552375 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
DDX54-210ENST00000552375 PSPHP1O15172 72 aa5.2□□□□□ -1.58
DDX54-210ENST00000552375 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
DDX54-210ENST00000552375 MIR22HGQ0VDD5 57 aa5.17□□□□□ -1.58
DDX54-210ENST00000552375 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
DDX54-210ENST00000552375 TNP1P09430 55 aa5.15□□□□□ -1.59
DDX54-210ENST00000552375 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
DDX54-210ENST00000552375 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
DDX54-210ENST00000552375 V9GYY9 64 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms