RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
UBE2N-205ENST00000550657 KRTAP17-1Q9BYP8 105 aa4.78□□□□□ -1.64
UBE2N-205ENST00000550657 KIAA1109Q2LD37 5005 aa4.78□□□□□ -1.64
UBE2N-205ENST00000550657 RYR1P21817 5038 aa4.78□□□□□ -1.64
UBE2N-205ENST00000550657 XP32Q5T750 250 aa4.77□□□□□ -1.65
UBE2N-205ENST00000550657 RPL37P61927 97 aaKnown RBP4.76□□□□□ -1.65
UBE2N-205ENST00000550657 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
UBE2N-205ENST00000550657 LPAP08519 4548 aa4.71□□□□□ -1.66
UBE2N-205ENST00000550657 A0A0D9SG42 100 aa4.7□□□□□ -1.66
UBE2N-205ENST00000550657 KRTAP3-3Q9BYR6 98 aa4.7□□□□□ -1.66
UBE2N-205ENST00000550657 S4R3F8 94 aa4.7□□□□□ -1.66
UBE2N-205ENST00000550657 CRIPTQ9P021 101 aa4.69□□□□□ -1.66
UBE2N-205ENST00000550657 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
UBE2N-205ENST00000550657 LINC01554Q52M75 96 aa4.68□□□□□ -1.66
UBE2N-205ENST00000550657 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
UBE2N-205ENST00000550657 K7ERS5 55 aa4.67□□□□□ -1.66
UBE2N-205ENST00000550657 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
UBE2N-205ENST00000550657 LRP2P98164 4655 aa4.65□□□□□ -1.66
UBE2N-205ENST00000550657 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
UBE2N-205ENST00000550657 P0C880 135 aa4.63□□□□□ -1.67
UBE2N-205ENST00000550657 KRTAP3-2Q9BYR7 98 aa4.62□□□□□ -1.67
UBE2N-205ENST00000550657 ABCA13Q86UQ4 5058 aa4.61□□□□□ -1.67
UBE2N-205ENST00000550657 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
UBE2N-205ENST00000550657 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
UBE2N-205ENST00000550657 TPRXLQ17RH7 258 aa4.54□□□□□ -1.68
UBE2N-205ENST00000550657 ROMO1P60602 79 aa4.54□□□□□ -1.68
UBE2N-205ENST00000550657 SPINT4Q6UDR6 99 aa4.54□□□□□ -1.68
UBE2N-205ENST00000550657 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
UBE2N-205ENST00000550657 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
UBE2N-205ENST00000550657 J3QL48 77 aa4.46□□□□□ -1.7
UBE2N-205ENST00000550657 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
UBE2N-205ENST00000550657 M0QZ58 72 aa4.42□□□□□ -1.7
UBE2N-205ENST00000550657 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
UBE2N-205ENST00000550657 HERC2O95714 4834 aa4.41□□□□□ -1.7
UBE2N-205ENST00000550657 KRTAP4-1Q9BYQ7 146 aa4.39□□□□□ -1.71
UBE2N-205ENST00000550657 R4GN34 69 aa4.39□□□□□ -1.71
UBE2N-205ENST00000550657 MUC2Q02817 5179 aa4.38□□□□□ -1.71
UBE2N-205ENST00000550657 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
UBE2N-205ENST00000550657 LORP23490 312 aaPredicted RBP4.35□□□□□ -1.71
UBE2N-205ENST00000550657 BIRC6Q9NR09 4857 aa4.29□□□□□ -1.72
UBE2N-205ENST00000550657 H3BS24 57 aa4.27□□□□□ -1.73
UBE2N-205ENST00000550657 HERC1Q15751 4861 aa4.25□□□□□ -1.73
UBE2N-205ENST00000550657 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
UBE2N-205ENST00000550657 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
UBE2N-205ENST00000550657 PCLOQ9Y6V0 5065 aa4.19□□□□□ -1.74
UBE2N-205ENST00000550657 FAT4Q6V0I7 4981 aa4.16□□□□□ -1.74
UBE2N-205ENST00000550657 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
UBE2N-205ENST00000550657 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
UBE2N-205ENST00000550657 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
UBE2N-205ENST00000550657 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
UBE2N-205ENST00000550657 RNF213Q63HN8 5207 aa4.09□□□□□ -1.75
UBE2N-205ENST00000550657 M0R2T5 61 aa4.06□□□□□ -1.76
UBE2N-205ENST00000550657 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
UBE2N-205ENST00000550657 PLAC4Q8WY50 150 aa4.03□□□□□ -1.76
UBE2N-205ENST00000550657 LCE2CQ5TA81 110 aa4□□□□□ -1.77
UBE2N-205ENST00000550657 TNP1P09430 55 aa3.97□□□□□ -1.77
UBE2N-205ENST00000550657 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
UBE2N-205ENST00000550657 LCE2DQ5TA82 110 aaPredicted RBP3.95□□□□□ -1.78
UBE2N-205ENST00000550657 MT1HP80294 61 aa3.93□□□□□ -1.78
UBE2N-205ENST00000550657 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
UBE2N-205ENST00000550657 KRTAP19-1Q8IUB9 90 aa3.92□□□□□ -1.78
UBE2N-205ENST00000550657 SPRR2GQ9BYE4 73 aa3.89□□□□□ -1.79
UBE2N-205ENST00000550657 MT1FP04733 61 aa3.88□□□□□ -1.79
UBE2N-205ENST00000550657 MT2AP02795 61 aa3.87□□□□□ -1.79
UBE2N-205ENST00000550657 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
UBE2N-205ENST00000550657 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
UBE2N-205ENST00000550657 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
UBE2N-205ENST00000550657 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
UBE2N-205ENST00000550657 MT1BP07438 61 aa3.71□□□□□ -1.81
UBE2N-205ENST00000550657 KRTAP19-8Q3LI54 63 aa3.7□□□□□ -1.82
UBE2N-205ENST00000550657 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
UBE2N-205ENST00000550657 MT1XP80297 61 aa3.69□□□□□ -1.82
UBE2N-205ENST00000550657 USH2AO75445 5202 aa3.65□□□□□ -1.82
UBE2N-205ENST00000550657 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
UBE2N-205ENST00000550657 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
UBE2N-205ENST00000550657 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
UBE2N-205ENST00000550657 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
UBE2N-205ENST00000550657 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
UBE2N-205ENST00000550657 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
UBE2N-205ENST00000550657 KRTAP12-3P60328 96 aa3.59□□□□□ -1.84
UBE2N-205ENST00000550657 KMT2DO14686 5537 aa3.57□□□□□ -1.84
UBE2N-205ENST00000550657 PRO2289Q9P1D8 64 aa3.55□□□□□ -1.84
UBE2N-205ENST00000550657 LCE2BO14633 110 aa3.54□□□□□ -1.84
UBE2N-205ENST00000550657 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
UBE2N-205ENST00000550657 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
UBE2N-205ENST00000550657 KRTAP4-8A0A0G2JLE6 195 aa3.45□□□□□ -1.86
UBE2N-205ENST00000550657 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
UBE2N-205ENST00000550657 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
UBE2N-205ENST00000550657 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
UBE2N-205ENST00000550657 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
UBE2N-205ENST00000550657 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
UBE2N-205ENST00000550657 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
UBE2N-205ENST00000550657 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
UBE2N-205ENST00000550657 INE1O15225 51 aa3.2□□□□□ -1.9
UBE2N-205ENST00000550657 MT1EP04732 61 aa3.19□□□□□ -1.9
UBE2N-205ENST00000550657 MT1LQ93083 61 aa3.18□□□□□ -1.9
UBE2N-205ENST00000550657 KRTAP19-6Q3LI70 58 aa3.16□□□□□ -1.9
UBE2N-205ENST00000550657 MUC12Q9UKN1 5478 aa3.16□□□□□ -1.9
UBE2N-205ENST00000550657 FCGBPQ9Y6R7 5405 aaPredicted RBP3.15□□□□□ -1.9
UBE2N-205ENST00000550657 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms