RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 KRTAP2-4Q9BYR9 128 aa9.27□□□□□ -0.93
SMARCC2-210ENST00000550519 H0YAA0 97 aa9.24□□□□□ -0.93
SMARCC2-210ENST00000550519 K7EP34 96 aa9.23□□□□□ -0.93
SMARCC2-210ENST00000550519 TRAV22A0A0B4J277 110 aa9.22□□□□□ -0.93
SMARCC2-210ENST00000550519 LOC101927531A0A1B0GV80 90 aa9.22□□□□□ -0.93
SMARCC2-210ENST00000550519 SPRR2FQ96RM1 72 aa9.19□□□□□ -0.94
SMARCC2-210ENST00000550519 NDUFC1O43677 76 aa9.18□□□□□ -0.94
SMARCC2-210ENST00000550519 COL5A1-AS1Q5SY13 56 aa9.17□□□□□ -0.94
SMARCC2-210ENST00000550519 LOC105371267A0A1B0GV96 52 aa9.16□□□□□ -0.94
SMARCC2-210ENST00000550519 SPRR2EP22531 72 aa9.14□□□□□ -0.95
SMARCC2-210ENST00000550519 SPRR2BP35325 72 aa9.14□□□□□ -0.95
SMARCC2-210ENST00000550519 SPRR2AP35326 72 aa9.14□□□□□ -0.95
SMARCC2-210ENST00000550519 PRO2289Q9P1D8 64 aa9.14□□□□□ -0.95
SMARCC2-210ENST00000550519 MT1XP80297 61 aa9.13□□□□□ -0.95
SMARCC2-210ENST00000550519 A8MUN3 132 aa9.1□□□□□ -0.95
SMARCC2-210ENST00000550519 ADM2Q7Z4H4 148 aa9.1□□□□□ -0.95
SMARCC2-210ENST00000550519 ETDBQ3ZM63 59 aa9.08□□□□□ -0.96
SMARCC2-210ENST00000550519 F8W1H4 67 aa9.06□□□□□ -0.96
SMARCC2-210ENST00000550519 KRTAP8-1Q8IUC2 63 aa9.04□□□□□ -0.96
SMARCC2-210ENST00000550519 UQCRQO14949 82 aa9.03□□□□□ -0.96
SMARCC2-210ENST00000550519 GTF2H5Q6ZYL4 71 aa9.03□□□□□ -0.96
SMARCC2-210ENST00000550519 ATOX1O00244 68 aa9.02□□□□□ -0.97
SMARCC2-210ENST00000550519 ACYP1P07311 99 aa9.02□□□□□ -0.97
SMARCC2-210ENST00000550519 H0Y9P7 68 aa9.01□□□□□ -0.97
SMARCC2-210ENST00000550519 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
SMARCC2-210ENST00000550519 LCE1AQ5T7P2 110 aa9□□□□□ -0.97
SMARCC2-210ENST00000550519 KRTAP12-2P59991 146 aa8.99□□□□□ -0.97
SMARCC2-210ENST00000550519 KRTAP2-2Q9BYT5 123 aa8.96□□□□□ -0.98
SMARCC2-210ENST00000550519 KRTAP2-1Q9BYU5 128 aa8.96□□□□□ -0.98
SMARCC2-210ENST00000550519 ATP5EP2Q5VTU8 51 aa8.91□□□□□ -0.98
SMARCC2-210ENST00000550519 HIST1H4AP62805 103 aaKnown RBP8.9□□□□□ -0.98
SMARCC2-210ENST00000550519 R4GN34 69 aa8.9□□□□□ -0.98
SMARCC2-210ENST00000550519 KRTAP4-8A0A0G2JLE6 195 aa8.86□□□□□ -0.99
SMARCC2-210ENST00000550519 P0C880 135 aa8.86□□□□□ -0.99
SMARCC2-210ENST00000550519 KRTAP4-8Q9BYQ9 185 aa8.86□□□□□ -0.99
SMARCC2-210ENST00000550519 LINC00208Q96KT6 92 aa8.85□□□□□ -0.99
SMARCC2-210ENST00000550519 FAM240AA0A1B0GVK7 77 aa8.84□□□□□ -0.99
SMARCC2-210ENST00000550519 SPRR2DP22532 72 aa8.84□□□□□ -0.99
SMARCC2-210ENST00000550519 C20orf197Q8N268 126 aa8.81□□□□□ -1
SMARCC2-210ENST00000550519 M0QZ58 72 aa8.8□□□□□ -1
SMARCC2-210ENST00000550519 MP68P56378 58 aa8.72□□□□□ -1.01
SMARCC2-210ENST00000550519 OCR1Q9BZK8 76 aa8.71□□□□□ -1.02
SMARCC2-210ENST00000550519 KRTAP10-7P60409 375 aaPredicted RBP8.7□□□□□ -1.02
SMARCC2-210ENST00000550519 LINC01554Q52M75 96 aa8.69□□□□□ -1.02
SMARCC2-210ENST00000550519 KRTAP10-12P60413 245 aa8.67□□□□□ -1.02
SMARCC2-210ENST00000550519 LINC00643Q86TS7 51 aa8.67□□□□□ -1.02
SMARCC2-210ENST00000550519 LCE3BQ5TA77 95 aa8.64□□□□□ -1.03
SMARCC2-210ENST00000550519 DMAC1Q96GE9 116 aa8.64□□□□□ -1.03
SMARCC2-210ENST00000550519 PCP4L1A6NKN8 68 aa8.6□□□□□ -1.03
SMARCC2-210ENST00000550519 H3BPC8 53 aa8.57□□□□□ -1.04
SMARCC2-210ENST00000550519 TRAV7A0A075B6U4 112 aa8.44□□□□□ -1.06
SMARCC2-210ENST00000550519 MT-ATP8P03928 68 aa8.43□□□□□ -1.06
SMARCC2-210ENST00000550519 ACYP2P14621 99 aa8.34□□□□□ -1.07
SMARCC2-210ENST00000550519 SCGB1A1P11684 91 aa8.33□□□□□ -1.08
SMARCC2-210ENST00000550519 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
SMARCC2-210ENST00000550519 DSTQ03001 7570 aaKnown RBP8.23□□□□□ -1.09
SMARCC2-210ENST00000550519 LCE5AQ5TCM9 118 aa8.21□□□□□ -1.1
SMARCC2-210ENST00000550519 GPR98Q8WXG9 6306 aa8.21□□□□□ -1.1
SMARCC2-210ENST00000550519 KRTAP19-7Q3SYF9 63 aa8.18□□□□□ -1.1
SMARCC2-210ENST00000550519 CHKB-CPT1BH3BT56 60 aa8.15□□□□□ -1.1
SMARCC2-210ENST00000550519 KRTAP4-9Q9BYQ8 210 aa8.14□□□□□ -1.11
SMARCC2-210ENST00000550519 J3QR89 54 aa8.13□□□□□ -1.11
SMARCC2-210ENST00000550519 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
SMARCC2-210ENST00000550519 A0A1B0GV90 55 aa8.12□□□□□ -1.11
SMARCC2-210ENST00000550519 KRTAP19-3Q7Z4W3 81 aa8.12□□□□□ -1.11
SMARCC2-210ENST00000550519 MT1EP04732 61 aa8.11□□□□□ -1.11
SMARCC2-210ENST00000550519 CAMK2N1Q7Z7J9 78 aa8.11□□□□□ -1.11
SMARCC2-210ENST00000550519 SMIM20Q8N5G0 67 aa8.02□□□□□ -1.13
SMARCC2-210ENST00000550519 CYSTM1Q9H1C7 97 aa7.94□□□□□ -1.14
SMARCC2-210ENST00000550519 LCE1DQ5T752 114 aa7.92□□□□□ -1.14
SMARCC2-210ENST00000550519 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
SMARCC2-210ENST00000550519 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.14
SMARCC2-210ENST00000550519 MT1GP13640 62 aa7.89□□□□□ -1.15
SMARCC2-210ENST00000550519 A0A0D9SG42 100 aa7.86□□□□□ -1.15
SMARCC2-210ENST00000550519 KRTAP19-5Q3LI72 72 aa7.85□□□□□ -1.15
SMARCC2-210ENST00000550519 LCE4AQ5TA78 99 aa7.81□□□□□ -1.16
SMARCC2-210ENST00000550519 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
SMARCC2-210ENST00000550519 HMCN1Q96RW7 5635 aa7.8□□□□□ -1.16
SMARCC2-210ENST00000550519 MT4P47944 62 aa7.76□□□□□ -1.17
SMARCC2-210ENST00000550519 MT1MQ8N339 61 aa7.75□□□□□ -1.17
SMARCC2-210ENST00000550519 SPATA8Q6RVD6 105 aa7.72□□□□□ -1.17
SMARCC2-210ENST00000550519 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
SMARCC2-210ENST00000550519 COA5Q86WW8 74 aa7.69□□□□□ -1.18
SMARCC2-210ENST00000550519 MT1LQ93083 61 aa7.69□□□□□ -1.18
SMARCC2-210ENST00000550519 SERP1Q9Y6X1 66 aa7.69□□□□□ -1.18
SMARCC2-210ENST00000550519 SEC61GP60059 68 aa7.68□□□□□ -1.18
SMARCC2-210ENST00000550519 KRTAP12-1P59990 96 aa7.66□□□□□ -1.18
SMARCC2-210ENST00000550519 K7ERU9 68 aa7.63□□□□□ -1.19
SMARCC2-210ENST00000550519 KRTAP5-4Q6L8H1 288 aa7.63□□□□□ -1.19
SMARCC2-210ENST00000550519 A0A1B0GU33 70 aa7.62□□□□□ -1.19
SMARCC2-210ENST00000550519 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
SMARCC2-210ENST00000550519 AHNAK2Q8IVF2 5795 aa7.61□□□□□ -1.19
SMARCC2-210ENST00000550519 KRTAP4-3Q9BYR4 195 aa7.58□□□□□ -1.2
SMARCC2-210ENST00000550519 KRTAP5-10Q6L8G5 202 aa7.55□□□□□ -1.2
SMARCC2-210ENST00000550519 KRTAP4-6Q9BYQ5 205 aa7.53□□□□□ -1.2
SMARCC2-210ENST00000550519 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
SMARCC2-210ENST00000550519 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
SMARCC2-210ENST00000550519 SMIM26A0A096LP01 95 aa7.4□□□□□ -1.22
SMARCC2-210ENST00000550519 TNP1P09430 55 aa7.38□□□□□ -1.23
SMARCC2-210ENST00000550519 A8MU10 97 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms