RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 LINC00208Q96KT6 92 aa8.14□□□□□ -1.11
TUBA1A-206ENST00000550254 KLKP1Q107X0 134 aa8.12□□□□□ -1.11
TUBA1A-206ENST00000550254 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
TUBA1A-206ENST00000550254 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
TUBA1A-206ENST00000550254 MP68P56378 58 aa8.07□□□□□ -1.12
TUBA1A-206ENST00000550254 MT1BP07438 61 aa8.05□□□□□ -1.12
TUBA1A-206ENST00000550254 A8MUN3 132 aa8.04□□□□□ -1.12
TUBA1A-206ENST00000550254 KRTAP19-8Q3LI54 63 aa8.04□□□□□ -1.12
TUBA1A-206ENST00000550254 MACF1Q9UPN3 7388 aaKnown RBP8.04□□□□□ -1.12
TUBA1A-206ENST00000550254 NDUFC1O43677 76 aa8.02□□□□□ -1.13
TUBA1A-206ENST00000550254 Q5VV11 94 aa8□□□□□ -1.13
TUBA1A-206ENST00000550254 IMUPQ9GZP8 106 aa7.99□□□□□ -1.13
TUBA1A-206ENST00000550254 H3BPC8 53 aa7.98□□□□□ -1.13
TUBA1A-206ENST00000550254 H0YAA0 97 aa7.96□□□□□ -1.14
TUBA1A-206ENST00000550254 SCGB1A1P11684 91 aa7.96□□□□□ -1.14
TUBA1A-206ENST00000550254 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
TUBA1A-206ENST00000550254 MT-ATP8P03928 68 aa7.91□□□□□ -1.14
TUBA1A-206ENST00000550254 SYNE2Q8WXH0 6885 aaKnown RBP7.91□□□□□ -1.14
TUBA1A-206ENST00000550254 A6NN06 94 aa7.88□□□□□ -1.15
TUBA1A-206ENST00000550254 K7ERU9 68 aa7.88□□□□□ -1.15
TUBA1A-206ENST00000550254 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
TUBA1A-206ENST00000550254 DMAC1Q96GE9 116 aa7.87□□□□□ -1.15
TUBA1A-206ENST00000550254 KRTAP10-5P60370 271 aa7.83□□□□□ -1.16
TUBA1A-206ENST00000550254 TRAV7A0A075B6U4 112 aa7.79□□□□□ -1.16
TUBA1A-206ENST00000550254 KRTAP6-3Q3LI67 103 aa7.79□□□□□ -1.16
TUBA1A-206ENST00000550254 SMIM20Q8N5G0 67 aa7.77□□□□□ -1.17
TUBA1A-206ENST00000550254 P0C880 135 aa7.73□□□□□ -1.17
TUBA1A-206ENST00000550254 ACYP2P14621 99 aa7.68□□□□□ -1.18
TUBA1A-206ENST00000550254 C20orf197Q8N268 126 aa7.65□□□□□ -1.18
TUBA1A-206ENST00000550254 R4GN34 69 aa7.65□□□□□ -1.18
TUBA1A-206ENST00000550254 SNURFQ9Y675 71 aa7.64□□□□□ -1.19
TUBA1A-206ENST00000550254 M0QZ58 72 aa7.6□□□□□ -1.19
TUBA1A-206ENST00000550254 MT1XP80297 61 aa7.56□□□□□ -1.2
TUBA1A-206ENST00000550254 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
TUBA1A-206ENST00000550254 SERP2Q8N6R1 65 aa7.55□□□□□ -1.2
TUBA1A-206ENST00000550254 SPTSSBQ8NFR3 76 aa7.54□□□□□ -1.2
TUBA1A-206ENST00000550254 CHKB-CPT1BH3BT56 60 aa7.51□□□□□ -1.21
TUBA1A-206ENST00000550254 SPANXA2-OT1Q8N9U9 137 aa7.51□□□□□ -1.21
TUBA1A-206ENST00000550254 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
TUBA1A-206ENST00000550254 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
TUBA1A-206ENST00000550254 KRTAP5-9P26371 169 aa7.47□□□□□ -1.21
TUBA1A-206ENST00000550254 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
TUBA1A-206ENST00000550254 NEBP20929 6669 aa7.4□□□□□ -1.22
TUBA1A-206ENST00000550254 KMT2DO14686 5537 aa7.36□□□□□ -1.23
TUBA1A-206ENST00000550254 COX7CP15954 63 aa7.34□□□□□ -1.23
TUBA1A-206ENST00000550254 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
TUBA1A-206ENST00000550254 COA5Q86WW8 74 aa7.31□□□□□ -1.24
TUBA1A-206ENST00000550254 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
TUBA1A-206ENST00000550254 CYSTM1Q9H1C7 97 aa7.26□□□□□ -1.25
TUBA1A-206ENST00000550254 SPRR2FQ96RM1 72 aa7.25□□□□□ -1.25
TUBA1A-206ENST00000550254 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
TUBA1A-206ENST00000550254 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
TUBA1A-206ENST00000550254 H7BZZ5 65 aa7.23□□□□□ -1.25
TUBA1A-206ENST00000550254 KRTAP10-7P60409 375 aaPredicted RBP7.23□□□□□ -1.25
TUBA1A-206ENST00000550254 KRTAP4-8Q9BYQ9 185 aa7.23□□□□□ -1.25
TUBA1A-206ENST00000550254 MDN1Q9NU22 5596 aa7.2□□□□□ -1.26
TUBA1A-206ENST00000550254 KRTAP10-12P60413 245 aa7.18□□□□□ -1.26
TUBA1A-206ENST00000550254 KRTAP20-1Q3LI63 56 aa7.15□□□□□ -1.26
TUBA1A-206ENST00000550254 SPRR2EP22531 72 aa7.12□□□□□ -1.27
TUBA1A-206ENST00000550254 SPRR2BP35325 72 aa7.12□□□□□ -1.27
TUBA1A-206ENST00000550254 SPRR2AP35326 72 aa7.12□□□□□ -1.27
TUBA1A-206ENST00000550254 SEC61GP60059 68 aa7.1□□□□□ -1.27
TUBA1A-206ENST00000550254 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
TUBA1A-206ENST00000550254 ANAPC13Q9BS18 74 aa7.09□□□□□ -1.27
TUBA1A-206ENST00000550254 LCE1AQ5T7P2 110 aa7.07□□□□□ -1.28
TUBA1A-206ENST00000550254 SPATA8Q6RVD6 105 aa7.04□□□□□ -1.28
TUBA1A-206ENST00000550254 CAMK2N1Q7Z7J9 78 aa7.03□□□□□ -1.28
TUBA1A-206ENST00000550254 A0A1B0GU33 70 aa7.02□□□□□ -1.29
TUBA1A-206ENST00000550254 A0A0D9SG42 100 aa7.01□□□□□ -1.29
TUBA1A-206ENST00000550254 CCDC179H3BU77 68 aa7□□□□□ -1.29
TUBA1A-206ENST00000550254 KRTAP2-3P0C7H8 128 aa7□□□□□ -1.29
TUBA1A-206ENST00000550254 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
TUBA1A-206ENST00000550254 A0A1B0GU69 56 aa6.91□□□□□ -1.3
TUBA1A-206ENST00000550254 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
TUBA1A-206ENST00000550254 KRTAP12-1P59990 96 aa6.9□□□□□ -1.3
TUBA1A-206ENST00000550254 SPRR2DP22532 72 aa6.88□□□□□ -1.31
TUBA1A-206ENST00000550254 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
TUBA1A-206ENST00000550254 SMIM26A0A096LP01 95 aa6.8□□□□□ -1.32
TUBA1A-206ENST00000550254 A8MU10 97 aa6.8□□□□□ -1.32
TUBA1A-206ENST00000550254 PCP4P48539 62 aa6.78□□□□□ -1.32
TUBA1A-206ENST00000550254 KRTAP2-2Q9BYT5 123 aa6.78□□□□□ -1.32
TUBA1A-206ENST00000550254 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
TUBA1A-206ENST00000550254 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
TUBA1A-206ENST00000550254 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
TUBA1A-206ENST00000550254 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
TUBA1A-206ENST00000550254 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.34
TUBA1A-206ENST00000550254 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
TUBA1A-206ENST00000550254 PRR15LQ9BU68 103 aa6.7□□□□□ -1.34
TUBA1A-206ENST00000550254 MT1EP04732 61 aa6.69□□□□□ -1.34
TUBA1A-206ENST00000550254 TMEM258P61165 79 aa6.69□□□□□ -1.34
TUBA1A-206ENST00000550254 LCE5AQ5TCM9 118 aa6.62□□□□□ -1.35
TUBA1A-206ENST00000550254 KRTAP19-3Q7Z4W3 81 aa6.61□□□□□ -1.35
TUBA1A-206ENST00000550254 C10orf95Q9H7T3 257 aa6.61□□□□□ -1.35
TUBA1A-206ENST00000550254 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
TUBA1A-206ENST00000550254 TNP1P09430 55 aa6.51□□□□□ -1.37
TUBA1A-206ENST00000550254 UQCR11O14957 56 aa6.5□□□□□ -1.37
TUBA1A-206ENST00000550254 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
TUBA1A-206ENST00000550254 MT1GP13640 62 aa6.46□□□□□ -1.38
TUBA1A-206ENST00000550254 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
TUBA1A-206ENST00000550254 MT1LQ93083 61 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms