RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 DNAH7Q8WXX0 4024 aa8.61□□□□□ -1.03
ATXN2-219ENST00000550104 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
ATXN2-219ENST00000550104 P0C880 135 aa8.55□□□□□ -1.04
ATXN2-219ENST00000550104 DYNC2H1Q8NCM8 4307 aaKnown RBP8.53□□□□□ -1.04
ATXN2-219ENST00000550104 FAT1Q14517 4588 aa8.52□□□□□ -1.05
ATXN2-219ENST00000550104 DYNC1H1Q14204 4646 aaKnown RBP8.48□□□□□ -1.05
ATXN2-219ENST00000550104 FRAS1Q86XX4 4008 aa8.46□□□□□ -1.05
ATXN2-219ENST00000550104 MT1HL1P0DM35 61 aa8.44□□□□□ -1.06
ATXN2-219ENST00000550104 HECTD4Q9Y4D8 3996 aa8.42□□□□□ -1.06
ATXN2-219ENST00000550104 DNAH6Q9C0G6 4158 aa8.42□□□□□ -1.06
ATXN2-219ENST00000550104 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
ATXN2-219ENST00000550104 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
ATXN2-219ENST00000550104 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
ATXN2-219ENST00000550104 PLAC4Q8WY50 150 aa8.26□□□□□ -1.09
ATXN2-219ENST00000550104 HYDINQ4G0P3 5121 aa8.25□□□□□ -1.09
ATXN2-219ENST00000550104 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
ATXN2-219ENST00000550104 SACSQ9NZJ4 4579 aa8.23□□□□□ -1.09
ATXN2-219ENST00000550104 FAT2Q9NYQ8 4349 aa8.23□□□□□ -1.09
ATXN2-219ENST00000550104 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
ATXN2-219ENST00000550104 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
ATXN2-219ENST00000550104 PKHD1P08F94 4074 aa8.11□□□□□ -1.11
ATXN2-219ENST00000550104 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
ATXN2-219ENST00000550104 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
ATXN2-219ENST00000550104 MYCBP2O75592 4640 aa8.08□□□□□ -1.12
ATXN2-219ENST00000550104 APOBP04114 4563 aaKnown RBP8.08□□□□□ -1.12
ATXN2-219ENST00000550104 KIAA1109Q2LD37 5005 aa8.06□□□□□ -1.12
ATXN2-219ENST00000550104 RYR1P21817 5038 aa8.05□□□□□ -1.12
ATXN2-219ENST00000550104 LRP1Q07954 4544 aaKnown RBP8.03□□□□□ -1.12
ATXN2-219ENST00000550104 TNP1P09430 55 aa7.98□□□□□ -1.13
ATXN2-219ENST00000550104 RYR3Q15413 4870 aa7.98□□□□□ -1.13
ATXN2-219ENST00000550104 RYR2Q92736 4967 aa7.97□□□□□ -1.13
ATXN2-219ENST00000550104 PKD1P98161 4303 aa7.94□□□□□ -1.14
ATXN2-219ENST00000550104 KRTAP17-1Q9BYP8 105 aa7.91□□□□□ -1.14
ATXN2-219ENST00000550104 KRTAP10-10P60014 251 aa7.9□□□□□ -1.15
ATXN2-219ENST00000550104 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
ATXN2-219ENST00000550104 FAT3Q8TDW7 4589 aa7.82□□□□□ -1.16
ATXN2-219ENST00000550104 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
ATXN2-219ENST00000550104 KRTAP15-1Q3LI76 137 aa7.79□□□□□ -1.16
ATXN2-219ENST00000550104 HSPG2P98160 4391 aa7.71□□□□□ -1.17
ATXN2-219ENST00000550104 KRTAP4-1Q9BYQ7 146 aa7.71□□□□□ -1.18
ATXN2-219ENST00000550104 LORP23490 312 aaPredicted RBP7.69□□□□□ -1.18
ATXN2-219ENST00000550104 LRP2P98164 4655 aa7.59□□□□□ -1.19
ATXN2-219ENST00000550104 HERC2O95714 4834 aa7.49□□□□□ -1.21
ATXN2-219ENST00000550104 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
ATXN2-219ENST00000550104 TNXBP22105 4242 aa7.44□□□□□ -1.22
ATXN2-219ENST00000550104 PRO2289Q9P1D8 64 aa7.39□□□□□ -1.23
ATXN2-219ENST00000550104 LPAP08519 4548 aa7.39□□□□□ -1.23
ATXN2-219ENST00000550104 EPPK1P58107 5090 aaKnown RBP7.39□□□□□ -1.23
ATXN2-219ENST00000550104 ABCA13Q86UQ4 5058 aa7.2□□□□□ -1.26
ATXN2-219ENST00000550104 BIRC6Q9NR09 4857 aa7.19□□□□□ -1.26
ATXN2-219ENST00000550104 MT1HP80294 61 aa7.17□□□□□ -1.26
ATXN2-219ENST00000550104 MT2AP02795 61 aa7.06□□□□□ -1.28
ATXN2-219ENST00000550104 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
ATXN2-219ENST00000550104 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.28
ATXN2-219ENST00000550104 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
ATXN2-219ENST00000550104 MT1FP04733 61 aa7.01□□□□□ -1.29
ATXN2-219ENST00000550104 HERC1Q15751 4861 aa6.99□□□□□ -1.29
ATXN2-219ENST00000550104 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
ATXN2-219ENST00000550104 INE1O15225 51 aa6.95□□□□□ -1.3
ATXN2-219ENST00000550104 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
ATXN2-219ENST00000550104 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
ATXN2-219ENST00000550104 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
ATXN2-219ENST00000550104 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
ATXN2-219ENST00000550104 PCLOQ9Y6V0 5065 aa6.86□□□□□ -1.31
ATXN2-219ENST00000550104 MUC17Q685J3 4493 aa6.82□□□□□ -1.32
ATXN2-219ENST00000550104 MUC2Q02817 5179 aa6.81□□□□□ -1.32
ATXN2-219ENST00000550104 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
ATXN2-219ENST00000550104 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
ATXN2-219ENST00000550104 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
ATXN2-219ENST00000550104 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
ATXN2-219ENST00000550104 HMCN2Q8NDA2 5059 aa6.61□□□□□ -1.35
ATXN2-219ENST00000550104 RNF213Q63HN8 5207 aa6.6□□□□□ -1.35
ATXN2-219ENST00000550104 MT1BP07438 61 aa6.57□□□□□ -1.36
ATXN2-219ENST00000550104 MT1XP80297 61 aa6.53□□□□□ -1.36
ATXN2-219ENST00000550104 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
ATXN2-219ENST00000550104 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
ATXN2-219ENST00000550104 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
ATXN2-219ENST00000550104 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
ATXN2-219ENST00000550104 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
ATXN2-219ENST00000550104 KRTAP19-5Q3LI72 72 aa6.42□□□□□ -1.38
ATXN2-219ENST00000550104 CRCT1Q9UGL9 99 aa6.35□□□□□ -1.39
ATXN2-219ENST00000550104 LCE2BO14633 110 aa6.25□□□□□ -1.41
ATXN2-219ENST00000550104 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.41
ATXN2-219ENST00000550104 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
ATXN2-219ENST00000550104 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
ATXN2-219ENST00000550104 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
ATXN2-219ENST00000550104 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
ATXN2-219ENST00000550104 LCE2AQ5TA79 106 aaPredicted RBP6.01□□□□□ -1.45
ATXN2-219ENST00000550104 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
ATXN2-219ENST00000550104 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
ATXN2-219ENST00000550104 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
ATXN2-219ENST00000550104 USH2AO75445 5202 aa5.81□□□□□ -1.48
ATXN2-219ENST00000550104 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
ATXN2-219ENST00000550104 MT1EP04732 61 aa5.75□□□□□ -1.49
ATXN2-219ENST00000550104 MT1LQ93083 61 aa5.75□□□□□ -1.49
ATXN2-219ENST00000550104 MT1GP13640 62 aa5.73□□□□□ -1.49
ATXN2-219ENST00000550104 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
ATXN2-219ENST00000550104 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
ATXN2-219ENST00000550104 KMT2DO14686 5537 aa5.65□□□□□ -1.5
ATXN2-219ENST00000550104 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms