RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
RAPGEF3-217ENST00000548434 TRAV22A0A0B4J277 110 aa6.91□□□□□ -1.3
RAPGEF3-217ENST00000548434 GTF2H5Q6ZYL4 71 aa6.91□□□□□ -1.3
RAPGEF3-217ENST00000548434 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.3
RAPGEF3-217ENST00000548434 H0YAA0 97 aa6.89□□□□□ -1.31
RAPGEF3-217ENST00000548434 IMUPQ9GZP8 106 aa6.86□□□□□ -1.31
RAPGEF3-217ENST00000548434 KRTAP20-1Q3LI63 56 aa6.83□□□□□ -1.32
RAPGEF3-217ENST00000548434 UQCRQO14949 82 aa6.81□□□□□ -1.32
RAPGEF3-217ENST00000548434 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
RAPGEF3-217ENST00000548434 ACYP1P07311 99 aa6.8□□□□□ -1.32
RAPGEF3-217ENST00000548434 MT1XP80297 61 aa6.79□□□□□ -1.32
RAPGEF3-217ENST00000548434 H0Y9P7 68 aa6.78□□□□□ -1.32
RAPGEF3-217ENST00000548434 NDUFC1O43677 76 aa6.78□□□□□ -1.32
RAPGEF3-217ENST00000548434 ATP5EP2Q5VTU8 51 aa6.77□□□□□ -1.33
RAPGEF3-217ENST00000548434 ATOX1O00244 68 aa6.75□□□□□ -1.33
RAPGEF3-217ENST00000548434 ADM2Q7Z4H4 148 aa6.74□□□□□ -1.33
RAPGEF3-217ENST00000548434 A8MUN3 132 aa6.73□□□□□ -1.33
RAPGEF3-217ENST00000548434 PCP4L1A6NKN8 68 aa6.71□□□□□ -1.34
RAPGEF3-217ENST00000548434 HIST1H4AP62805 103 aaKnown RBP6.71□□□□□ -1.34
RAPGEF3-217ENST00000548434 OCR1Q9BZK8 76 aa6.68□□□□□ -1.34
RAPGEF3-217ENST00000548434 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
RAPGEF3-217ENST00000548434 LINC00208Q96KT6 92 aa6.66□□□□□ -1.34
RAPGEF3-217ENST00000548434 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
RAPGEF3-217ENST00000548434 P0C880 135 aa6.64□□□□□ -1.35
RAPGEF3-217ENST00000548434 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
RAPGEF3-217ENST00000548434 LINC00643Q86TS7 51 aa6.64□□□□□ -1.35
RAPGEF3-217ENST00000548434 SPRR2FQ96RM1 72 aa6.64□□□□□ -1.35
RAPGEF3-217ENST00000548434 KRTAP3-2Q9BYR7 98 aa6.63□□□□□ -1.35
RAPGEF3-217ENST00000548434 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
RAPGEF3-217ENST00000548434 SPRR2EP22531 72 aa6.58□□□□□ -1.36
RAPGEF3-217ENST00000548434 SPRR2BP35325 72 aa6.58□□□□□ -1.36
RAPGEF3-217ENST00000548434 SPRR2AP35326 72 aa6.58□□□□□ -1.36
RAPGEF3-217ENST00000548434 LCE1AQ5T7P2 110 aa6.58□□□□□ -1.36
RAPGEF3-217ENST00000548434 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
RAPGEF3-217ENST00000548434 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
RAPGEF3-217ENST00000548434 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
RAPGEF3-217ENST00000548434 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
RAPGEF3-217ENST00000548434 DMAC1Q96GE9 116 aa6.53□□□□□ -1.36
RAPGEF3-217ENST00000548434 MP68P56378 58 aa6.52□□□□□ -1.37
RAPGEF3-217ENST00000548434 R4GN34 69 aa6.52□□□□□ -1.37
RAPGEF3-217ENST00000548434 H3BPC8 53 aa6.49□□□□□ -1.37
RAPGEF3-217ENST00000548434 M0QZ58 72 aa6.48□□□□□ -1.37
RAPGEF3-217ENST00000548434 C20orf197Q8N268 126 aa6.46□□□□□ -1.38
RAPGEF3-217ENST00000548434 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
RAPGEF3-217ENST00000548434 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
RAPGEF3-217ENST00000548434 KRTAP2-2Q9BYT5 123 aa6.43□□□□□ -1.38
RAPGEF3-217ENST00000548434 KRTAP2-1Q9BYU5 128 aa6.43□□□□□ -1.38
RAPGEF3-217ENST00000548434 A0A1B0GV90 55 aa6.41□□□□□ -1.38
RAPGEF3-217ENST00000548434 TRAV7A0A075B6U4 112 aa6.35□□□□□ -1.39
RAPGEF3-217ENST00000548434 SPRR2DP22532 72 aa6.35□□□□□ -1.39
RAPGEF3-217ENST00000548434 LINC01554Q52M75 96 aa6.35□□□□□ -1.39
RAPGEF3-217ENST00000548434 ACYP2P14621 99 aa6.27□□□□□ -1.41
RAPGEF3-217ENST00000548434 SCGB1A1P11684 91 aa6.26□□□□□ -1.41
RAPGEF3-217ENST00000548434 J3QR89 54 aa6.23□□□□□ -1.41
RAPGEF3-217ENST00000548434 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
RAPGEF3-217ENST00000548434 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
RAPGEF3-217ENST00000548434 MT-ATP8P03928 68 aa6.17□□□□□ -1.42
RAPGEF3-217ENST00000548434 SPTSSBQ8NFR3 76 aa6.15□□□□□ -1.42
RAPGEF3-217ENST00000548434 SMIM20Q8N5G0 67 aa6.11□□□□□ -1.43
RAPGEF3-217ENST00000548434 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
RAPGEF3-217ENST00000548434 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
RAPGEF3-217ENST00000548434 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
RAPGEF3-217ENST00000548434 SNURFQ9Y675 71 aa6.05□□□□□ -1.44
RAPGEF3-217ENST00000548434 CHKB-CPT1BH3BT56 60 aa6.04□□□□□ -1.44
RAPGEF3-217ENST00000548434 DSTQ03001 7570 aaKnown RBP6.02□□□□□ -1.45
RAPGEF3-217ENST00000548434 MT1EP04732 61 aa6.01□□□□□ -1.45
RAPGEF3-217ENST00000548434 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
RAPGEF3-217ENST00000548434 K7ERU9 68 aa5.95□□□□□ -1.46
RAPGEF3-217ENST00000548434 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
RAPGEF3-217ENST00000548434 SERP2Q8N6R1 65 aa5.89□□□□□ -1.47
RAPGEF3-217ENST00000548434 COA5Q86WW8 74 aa5.86□□□□□ -1.47
RAPGEF3-217ENST00000548434 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
RAPGEF3-217ENST00000548434 KRTAP19-5Q3LI72 72 aa5.82□□□□□ -1.48
RAPGEF3-217ENST00000548434 KRTAP12-1P59990 96 aa5.81□□□□□ -1.48
RAPGEF3-217ENST00000548434 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
RAPGEF3-217ENST00000548434 A0A0D9SG42 100 aa5.8□□□□□ -1.48
RAPGEF3-217ENST00000548434 MT1GP13640 62 aa5.8□□□□□ -1.48
RAPGEF3-217ENST00000548434 GPR98Q8WXG9 6306 aa5.79□□□□□ -1.48
RAPGEF3-217ENST00000548434 CYSTM1Q9H1C7 97 aa5.77□□□□□ -1.49
RAPGEF3-217ENST00000548434 A0A1B0GU33 70 aa5.73□□□□□ -1.49
RAPGEF3-217ENST00000548434 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
RAPGEF3-217ENST00000548434 MT1MQ8N339 61 aa5.72□□□□□ -1.49
RAPGEF3-217ENST00000548434 SERP1Q9Y6X1 66 aa5.72□□□□□ -1.49
RAPGEF3-217ENST00000548434 MT1LQ93083 61 aa5.71□□□□□ -1.5
RAPGEF3-217ENST00000548434 HMCN1Q96RW7 5635 aa5.7□□□□□ -1.5
RAPGEF3-217ENST00000548434 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
RAPGEF3-217ENST00000548434 H7BZZ5 65 aa5.68□□□□□ -1.5
RAPGEF3-217ENST00000548434 SEC61GP60059 68 aa5.68□□□□□ -1.5
RAPGEF3-217ENST00000548434 COX7CP15954 63 aa5.65□□□□□ -1.5
RAPGEF3-217ENST00000548434 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
RAPGEF3-217ENST00000548434 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
RAPGEF3-217ENST00000548434 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
RAPGEF3-217ENST00000548434 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
RAPGEF3-217ENST00000548434 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
RAPGEF3-217ENST00000548434 C10orf95Q9H7T3 257 aa5.59□□□□□ -1.51
RAPGEF3-217ENST00000548434 A8MU10 97 aa5.57□□□□□ -1.52
RAPGEF3-217ENST00000548434 MT4P47944 62 aa5.57□□□□□ -1.52
RAPGEF3-217ENST00000548434 AHNAK2Q8IVF2 5795 aa5.56□□□□□ -1.52
RAPGEF3-217ENST00000548434 SMIM26A0A096LP01 95 aa5.52□□□□□ -1.53
RAPGEF3-217ENST00000548434 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms