RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 MUC12Q9UKN1 5478 aa9.34□□□□□ -0.91
USP44-204ENST00000547951 H0Y9P7 68 aa9.29□□□□□ -0.92
USP44-204ENST00000547951 HIST1H4AP62805 103 aaKnown RBP9.29□□□□□ -0.92
USP44-204ENST00000547951 CRIPTQ9P021 101 aa9.29□□□□□ -0.92
USP44-204ENST00000547951 UQCRQO14949 82 aa9.27□□□□□ -0.93
USP44-204ENST00000547951 ACYP1P07311 99 aa9.27□□□□□ -0.93
USP44-204ENST00000547951 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
USP44-204ENST00000547951 ATP5EP2Q5VTU8 51 aa9.24□□□□□ -0.93
USP44-204ENST00000547951 FAM240AA0A1B0GVK7 77 aa9.23□□□□□ -0.93
USP44-204ENST00000547951 NDUFC1O43677 76 aa9.22□□□□□ -0.93
USP44-204ENST00000547951 KRTAP5-9P26371 169 aa9.21□□□□□ -0.94
USP44-204ENST00000547951 ATOX1O00244 68 aa9.2□□□□□ -0.94
USP44-204ENST00000547951 H0YAA0 97 aa9.19□□□□□ -0.94
USP44-204ENST00000547951 KMT2DO14686 5537 aa9.16□□□□□ -0.94
USP44-204ENST00000547951 ADM2Q7Z4H4 148 aa9.16□□□□□ -0.94
USP44-204ENST00000547951 LINC00208Q96KT6 92 aa9.12□□□□□ -0.95
USP44-204ENST00000547951 A8MUN3 132 aa9.1□□□□□ -0.95
USP44-204ENST00000547951 KRTAP20-1Q3LI63 56 aa9.09□□□□□ -0.95
USP44-204ENST00000547951 MDN1Q9NU22 5596 aa9.08□□□□□ -0.96
USP44-204ENST00000547951 LINC00643Q86TS7 51 aa9.08□□□□□ -0.96
USP44-204ENST00000547951 OCR1Q9BZK8 76 aa9.05□□□□□ -0.96
USP44-204ENST00000547951 MT1XP80297 61 aa9.04□□□□□ -0.96
USP44-204ENST00000547951 P0C880 135 aa8.98□□□□□ -0.97
USP44-204ENST00000547951 MP68P56378 58 aa8.97□□□□□ -0.97
USP44-204ENST00000547951 SPRR2FQ96RM1 72 aa8.92□□□□□ -0.98
USP44-204ENST00000547951 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
USP44-204ENST00000547951 PLAC4Q8WY50 150 aa8.9□□□□□ -0.98
USP44-204ENST00000547951 A0A1B0GV90 55 aa8.89□□□□□ -0.99
USP44-204ENST00000547951 R4GN34 69 aa8.88□□□□□ -0.99
USP44-204ENST00000547951 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
USP44-204ENST00000547951 M0QZ58 72 aa8.85□□□□□ -0.99
USP44-204ENST00000547951 DMAC1Q96GE9 116 aa8.85□□□□□ -0.99
USP44-204ENST00000547951 SPRR2EP22531 72 aa8.83□□□□□ -1
USP44-204ENST00000547951 SPRR2BP35325 72 aa8.83□□□□□ -1
USP44-204ENST00000547951 SPRR2AP35326 72 aa8.83□□□□□ -1
USP44-204ENST00000547951 KRTAP8-1Q8IUC2 63 aa8.8□□□□□ -1
USP44-204ENST00000547951 H3BPC8 53 aa8.79□□□□□ -1
USP44-204ENST00000547951 KRTAP2-3P0C7H8 128 aa8.79□□□□□ -1
USP44-204ENST00000547951 C20orf197Q8N268 126 aa8.79□□□□□ -1
USP44-204ENST00000547951 KRTAP2-4Q9BYR9 128 aa8.79□□□□□ -1
USP44-204ENST00000547951 KRTAP12-2P59991 146 aa8.77□□□□□ -1.01
USP44-204ENST00000547951 LINC01554Q52M75 96 aa8.76□□□□□ -1.01
USP44-204ENST00000547951 KRTAP4-8A0A0G2JLE6 195 aa8.74□□□□□ -1.01
USP44-204ENST00000547951 KRTAP4-8Q9BYQ9 185 aa8.74□□□□□ -1.01
USP44-204ENST00000547951 SCGB1A1P11684 91 aa8.72□□□□□ -1.01
USP44-204ENST00000547951 LCE1AQ5T7P2 110 aa8.71□□□□□ -1.02
USP44-204ENST00000547951 KRTAP10-7P60409 375 aaPredicted RBP8.64□□□□□ -1.03
USP44-204ENST00000547951 J3QR89 54 aa8.63□□□□□ -1.03
USP44-204ENST00000547951 TRAV7A0A075B6U4 112 aa8.6□□□□□ -1.03
USP44-204ENST00000547951 ACYP2P14621 99 aa8.54□□□□□ -1.04
USP44-204ENST00000547951 KRTAP10-12P60413 245 aa8.54□□□□□ -1.04
USP44-204ENST00000547951 SPRR2DP22532 72 aa8.53□□□□□ -1.04
USP44-204ENST00000547951 MT-ATP8P03928 68 aa8.5□□□□□ -1.05
USP44-204ENST00000547951 KRTAP2-2Q9BYT5 123 aa8.49□□□□□ -1.05
USP44-204ENST00000547951 KRTAP2-1Q9BYU5 128 aa8.49□□□□□ -1.05
USP44-204ENST00000547951 SPTSSBQ8NFR3 76 aa8.43□□□□□ -1.06
USP44-204ENST00000547951 CHKB-CPT1BH3BT56 60 aa8.39□□□□□ -1.07
USP44-204ENST00000547951 SNURFQ9Y675 71 aa8.39□□□□□ -1.07
USP44-204ENST00000547951 SMIM20Q8N5G0 67 aa8.38□□□□□ -1.07
USP44-204ENST00000547951 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.07
USP44-204ENST00000547951 LCE3BQ5TA77 95 aa8.31□□□□□ -1.08
USP44-204ENST00000547951 K7ERU9 68 aa8.24□□□□□ -1.09
USP44-204ENST00000547951 SPANXA2-OT1Q8N9U9 137 aa8.21□□□□□ -1.1
USP44-204ENST00000547951 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
USP44-204ENST00000547951 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
USP44-204ENST00000547951 KRTAP19-7Q3SYF9 63 aa8.09□□□□□ -1.11
USP44-204ENST00000547951 COA5Q86WW8 74 aa8.05□□□□□ -1.12
USP44-204ENST00000547951 A0A0D9SG42 100 aa8.02□□□□□ -1.13
USP44-204ENST00000547951 MT1EP04732 61 aa8.01□□□□□ -1.13
USP44-204ENST00000547951 LCE5AQ5TCM9 118 aa8□□□□□ -1.13
USP44-204ENST00000547951 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
USP44-204ENST00000547951 KRTAP19-3Q7Z4W3 81 aa7.95□□□□□ -1.14
USP44-204ENST00000547951 DSTQ03001 7570 aaKnown RBP7.92□□□□□ -1.14
USP44-204ENST00000547951 SERP1Q9Y6X1 66 aa7.88□□□□□ -1.15
USP44-204ENST00000547951 SEC61GP60059 68 aa7.87□□□□□ -1.15
USP44-204ENST00000547951 SPINT4Q6UDR6 99 aa7.87□□□□□ -1.15
USP44-204ENST00000547951 KRTAP4-9Q9BYQ8 210 aa7.85□□□□□ -1.15
USP44-204ENST00000547951 A0A1B0GU33 70 aa7.84□□□□□ -1.15
USP44-204ENST00000547951 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
USP44-204ENST00000547951 KRTAP19-5Q3LI72 72 aa7.84□□□□□ -1.15
USP44-204ENST00000547951 CYSTM1Q9H1C7 97 aa7.84□□□□□ -1.15
USP44-204ENST00000547951 COX7CP15954 63 aa7.78□□□□□ -1.16
USP44-204ENST00000547951 GPR98Q8WXG9 6306 aa7.76□□□□□ -1.17
USP44-204ENST00000547951 H7BZZ5 65 aa7.76□□□□□ -1.17
USP44-204ENST00000547951 MT1GP13640 62 aa7.7□□□□□ -1.18
USP44-204ENST00000547951 A8MU10 97 aa7.66□□□□□ -1.18
USP44-204ENST00000547951 MT1MQ8N339 61 aa7.64□□□□□ -1.19
USP44-204ENST00000547951 MT1LQ93083 61 aa7.62□□□□□ -1.19
USP44-204ENST00000547951 LCE1DQ5T752 114 aa7.61□□□□□ -1.19
USP44-204ENST00000547951 A0A1B0GU69 56 aa7.59□□□□□ -1.19
USP44-204ENST00000547951 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
USP44-204ENST00000547951 SMIM26A0A096LP01 95 aa7.57□□□□□ -1.2
USP44-204ENST00000547951 LCE3AQ5TA76 89 aa7.57□□□□□ -1.2
USP44-204ENST00000547951 KRTAP4-3Q9BYR4 195 aa7.55□□□□□ -1.2
USP44-204ENST00000547951 C10orf95Q9H7T3 257 aa7.54□□□□□ -1.2
USP44-204ENST00000547951 MT4P47944 62 aa7.51□□□□□ -1.21
USP44-204ENST00000547951 HMCN1Q96RW7 5635 aa7.48□□□□□ -1.21
USP44-204ENST00000547951 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
USP44-204ENST00000547951 TNP1P09430 55 aa7.44□□□□□ -1.22
USP44-204ENST00000547951 ANAPC13Q9BS18 74 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms