RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 A0A087WVE0 104 aa9.9□□□□□ -0.82
SMARCD1-204ENST00000547637 H0YAA0 97 aa9.9□□□□□ -0.82
SMARCD1-204ENST00000547637 K7EP34 96 aa9.9□□□□□ -0.82
SMARCD1-204ENST00000547637 KRTAP2-3P0C7H8 128 aa9.9□□□□□ -0.82
SMARCD1-204ENST00000547637 COL5A1-AS1Q5SY13 56 aa9.9□□□□□ -0.82
SMARCD1-204ENST00000547637 KRTAP2-4Q9BYR9 128 aa9.9□□□□□ -0.82
SMARCD1-204ENST00000547637 MDN1Q9NU22 5596 aa9.85□□□□□ -0.83
SMARCD1-204ENST00000547637 A8MUN3 132 aa9.82□□□□□ -0.84
SMARCD1-204ENST00000547637 SPRR2FQ96RM1 72 aa9.82□□□□□ -0.84
SMARCD1-204ENST00000547637 GTF2H5Q6ZYL4 71 aa9.81□□□□□ -0.84
SMARCD1-204ENST00000547637 ACYP1P07311 99 aa9.8□□□□□ -0.84
SMARCD1-204ENST00000547637 ATOX1O00244 68 aa9.79□□□□□ -0.84
SMARCD1-204ENST00000547637 F8W1H4 67 aa9.78□□□□□ -0.84
SMARCD1-204ENST00000547637 ADM2Q7Z4H4 148 aa9.78□□□□□ -0.84
SMARCD1-204ENST00000547637 PLAC4Q8WY50 150 aa9.78□□□□□ -0.84
SMARCD1-204ENST00000547637 SPRR2EP22531 72 aa9.77□□□□□ -0.85
SMARCD1-204ENST00000547637 SPRR2BP35325 72 aa9.77□□□□□ -0.85
SMARCD1-204ENST00000547637 SPRR2AP35326 72 aa9.77□□□□□ -0.85
SMARCD1-204ENST00000547637 UQCRQO14949 82 aa9.75□□□□□ -0.85
SMARCD1-204ENST00000547637 LOC105371267A0A1B0GV96 52 aa9.74□□□□□ -0.85
SMARCD1-204ENST00000547637 ETDBQ3ZM63 59 aa9.74□□□□□ -0.85
SMARCD1-204ENST00000547637 H0Y9P7 68 aa9.72□□□□□ -0.85
SMARCD1-204ENST00000547637 KRTAP8-1Q8IUC2 63 aa9.68□□□□□ -0.86
SMARCD1-204ENST00000547637 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
SMARCD1-204ENST00000547637 MT1XP80297 61 aa9.65□□□□□ -0.86
SMARCD1-204ENST00000547637 ATP5EP2Q5VTU8 51 aa9.65□□□□□ -0.86
SMARCD1-204ENST00000547637 R4GN34 69 aa9.63□□□□□ -0.87
SMARCD1-204ENST00000547637 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
SMARCD1-204ENST00000547637 KRTAP2-2Q9BYT5 123 aa9.57□□□□□ -0.88
SMARCD1-204ENST00000547637 KRTAP2-1Q9BYU5 128 aa9.57□□□□□ -0.88
SMARCD1-204ENST00000547637 KRTAP12-2P59991 146 aa9.56□□□□□ -0.88
SMARCD1-204ENST00000547637 LINC00208Q96KT6 92 aa9.54□□□□□ -0.88
SMARCD1-204ENST00000547637 LCE1AQ5T7P2 110 aa9.52□□□□□ -0.89
SMARCD1-204ENST00000547637 FAM240AA0A1B0GVK7 77 aa9.5□□□□□ -0.89
SMARCD1-204ENST00000547637 MP68P56378 58 aa9.5□□□□□ -0.89
SMARCD1-204ENST00000547637 M0QZ58 72 aa9.49□□□□□ -0.89
SMARCD1-204ENST00000547637 SPRR2DP22532 72 aa9.46□□□□□ -0.9
SMARCD1-204ENST00000547637 P0C880 135 aa9.42□□□□□ -0.9
SMARCD1-204ENST00000547637 LINC01554Q52M75 96 aa9.39□□□□□ -0.91
SMARCD1-204ENST00000547637 KRTAP4-8A0A0G2JLE6 195 aa9.35□□□□□ -0.91
SMARCD1-204ENST00000547637 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
SMARCD1-204ENST00000547637 KRTAP4-8Q9BYQ9 185 aa9.35□□□□□ -0.91
SMARCD1-204ENST00000547637 OCR1Q9BZK8 76 aa9.3□□□□□ -0.92
SMARCD1-204ENST00000547637 H3BPC8 53 aa9.29□□□□□ -0.92
SMARCD1-204ENST00000547637 PCP4L1A6NKN8 68 aa9.28□□□□□ -0.92
SMARCD1-204ENST00000547637 DMAC1Q96GE9 116 aa9.26□□□□□ -0.93
SMARCD1-204ENST00000547637 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
SMARCD1-204ENST00000547637 LCE3BQ5TA77 95 aa9.22□□□□□ -0.93
SMARCD1-204ENST00000547637 KRTAP10-7P60409 375 aaPredicted RBP9.21□□□□□ -0.94
SMARCD1-204ENST00000547637 MT-ATP8P03928 68 aa9.19□□□□□ -0.94
SMARCD1-204ENST00000547637 KRTAP10-12P60413 245 aa9.19□□□□□ -0.94
SMARCD1-204ENST00000547637 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
SMARCD1-204ENST00000547637 SCGB1A1P11684 91 aa9.11□□□□□ -0.95
SMARCD1-204ENST00000547637 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
SMARCD1-204ENST00000547637 ACYP2P14621 99 aa9.07□□□□□ -0.96
SMARCD1-204ENST00000547637 CHKB-CPT1BH3BT56 60 aa8.92□□□□□ -0.98
SMARCD1-204ENST00000547637 J3QR89 54 aa8.91□□□□□ -0.98
SMARCD1-204ENST00000547637 DSTQ03001 7570 aaKnown RBP8.83□□□□□ -1
SMARCD1-204ENST00000547637 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
SMARCD1-204ENST00000547637 SMIM20Q8N5G0 67 aa8.75□□□□□ -1.01
SMARCD1-204ENST00000547637 A0A1B0GV90 55 aa8.69□□□□□ -1.02
SMARCD1-204ENST00000547637 LCE5AQ5TCM9 118 aa8.69□□□□□ -1.02
SMARCD1-204ENST00000547637 GPR98Q8WXG9 6306 aa8.68□□□□□ -1.02
SMARCD1-204ENST00000547637 KRTAP19-3Q7Z4W3 81 aa8.64□□□□□ -1.03
SMARCD1-204ENST00000547637 KRTAP19-7Q3SYF9 63 aa8.62□□□□□ -1.03
SMARCD1-204ENST00000547637 KRTAP4-9Q9BYQ8 210 aa8.62□□□□□ -1.03
SMARCD1-204ENST00000547637 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
SMARCD1-204ENST00000547637 MT1EP04732 61 aa8.59□□□□□ -1.03
SMARCD1-204ENST00000547637 SPANXA2-OT1Q8N9U9 137 aa8.53□□□□□ -1.04
SMARCD1-204ENST00000547637 SNURFQ9Y675 71 aa8.52□□□□□ -1.05
SMARCD1-204ENST00000547637 CYSTM1Q9H1C7 97 aa8.5□□□□□ -1.05
SMARCD1-204ENST00000547637 SEC61GP60059 68 aa8.47□□□□□ -1.05
SMARCD1-204ENST00000547637 A0A0D9SG42 100 aa8.45□□□□□ -1.06
SMARCD1-204ENST00000547637 PP632Q6XCG6 107 aa8.45□□□□□ -1.06
SMARCD1-204ENST00000547637 MT1GP13640 62 aa8.44□□□□□ -1.06
SMARCD1-204ENST00000547637 SERP1Q9Y6X1 66 aa8.44□□□□□ -1.06
SMARCD1-204ENST00000547637 LCE1DQ5T752 114 aa8.38□□□□□ -1.07
SMARCD1-204ENST00000547637 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
SMARCD1-204ENST00000547637 LCE4AQ5TA78 99 aa8.35□□□□□ -1.07
SMARCD1-204ENST00000547637 KRTAP19-5Q3LI72 72 aa8.34□□□□□ -1.07
SMARCD1-204ENST00000547637 K7ERU9 68 aa8.32□□□□□ -1.08
SMARCD1-204ENST00000547637 COA5Q86WW8 74 aa8.29□□□□□ -1.08
SMARCD1-204ENST00000547637 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
SMARCD1-204ENST00000547637 MT4P47944 62 aa8.27□□□□□ -1.09
SMARCD1-204ENST00000547637 A0A1B0GU33 70 aa8.25□□□□□ -1.09
SMARCD1-204ENST00000547637 SERP2Q8N6R1 65 aa8.24□□□□□ -1.09
SMARCD1-204ENST00000547637 MT1MQ8N339 61 aa8.21□□□□□ -1.1
SMARCD1-204ENST00000547637 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
SMARCD1-204ENST00000547637 MT1LQ93083 61 aa8.15□□□□□ -1.1
SMARCD1-204ENST00000547637 HMCN1Q96RW7 5635 aa8.11□□□□□ -1.11
SMARCD1-204ENST00000547637 SMIM26A0A096LP01 95 aa8.07□□□□□ -1.12
SMARCD1-204ENST00000547637 KRTAP5-4Q6L8H1 288 aa8.04□□□□□ -1.12
SMARCD1-204ENST00000547637 TNP1P09430 55 aa8.02□□□□□ -1.13
SMARCD1-204ENST00000547637 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
SMARCD1-204ENST00000547637 KRTAP4-3Q9BYR4 195 aa7.98□□□□□ -1.13
SMARCD1-204ENST00000547637 LCE3AQ5TA76 89 aa7.97□□□□□ -1.13
SMARCD1-204ENST00000547637 KRTAP5-10Q6L8G5 202 aa7.96□□□□□ -1.14
SMARCD1-204ENST00000547637 A0A1B0GU69 56 aa7.95□□□□□ -1.14
SMARCD1-204ENST00000547637 KRTAP4-6Q9BYQ5 205 aa7.94□□□□□ -1.14
SMARCD1-204ENST00000547637 AHNAK2Q8IVF2 5795 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms