RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 IMUPQ9GZP8 106 aa8.21□□□□□ -1.1
CHPT1-202ENST00000546490 A0A087WVE0 104 aa8.2□□□□□ -1.1
CHPT1-202ENST00000546490 KRTAP5-9P26371 169 aa8.15□□□□□ -1.1
CHPT1-202ENST00000546490 NDUFC1O43677 76 aa8.12□□□□□ -1.11
CHPT1-202ENST00000546490 H0YAA0 97 aa8.11□□□□□ -1.11
CHPT1-202ENST00000546490 ATOX1O00244 68 aa8.11□□□□□ -1.11
CHPT1-202ENST00000546490 ATP5EP2Q5VTU8 51 aa8.11□□□□□ -1.11
CHPT1-202ENST00000546490 ACYP1P07311 99 aa8.1□□□□□ -1.11
CHPT1-202ENST00000546490 H0Y9P7 68 aa8.09□□□□□ -1.11
CHPT1-202ENST00000546490 UQCRQO14949 82 aa8.09□□□□□ -1.11
CHPT1-202ENST00000546490 KRTAP20-1Q3LI63 56 aa8.09□□□□□ -1.11
CHPT1-202ENST00000546490 HIST1H4AP62805 103 aaKnown RBP8.07□□□□□ -1.12
CHPT1-202ENST00000546490 KMT2DO14686 5537 aa8.07□□□□□ -1.12
CHPT1-202ENST00000546490 MDN1Q9NU22 5596 aa8.05□□□□□ -1.12
CHPT1-202ENST00000546490 FAM240AA0A1B0GVK7 77 aa8.04□□□□□ -1.12
CHPT1-202ENST00000546490 A8MUN3 132 aa8.03□□□□□ -1.12
CHPT1-202ENST00000546490 PCP4L1A6NKN8 68 aa7.99□□□□□ -1.13
CHPT1-202ENST00000546490 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
CHPT1-202ENST00000546490 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
CHPT1-202ENST00000546490 LINC00208Q96KT6 92 aa7.92□□□□□ -1.14
CHPT1-202ENST00000546490 MP68P56378 58 aa7.88□□□□□ -1.15
CHPT1-202ENST00000546490 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
CHPT1-202ENST00000546490 MT1XP80297 61 aa7.87□□□□□ -1.15
CHPT1-202ENST00000546490 LINC00643Q86TS7 51 aa7.87□□□□□ -1.15
CHPT1-202ENST00000546490 SPRR2FQ96RM1 72 aa7.87□□□□□ -1.15
CHPT1-202ENST00000546490 R4GN34 69 aa7.85□□□□□ -1.15
CHPT1-202ENST00000546490 C20orf197Q8N268 126 aa7.83□□□□□ -1.16
CHPT1-202ENST00000546490 OCR1Q9BZK8 76 aa7.82□□□□□ -1.16
CHPT1-202ENST00000546490 KRTAP2-3P0C7H8 128 aa7.81□□□□□ -1.16
CHPT1-202ENST00000546490 SPRR2EP22531 72 aa7.81□□□□□ -1.16
CHPT1-202ENST00000546490 SPRR2BP35325 72 aa7.81□□□□□ -1.16
CHPT1-202ENST00000546490 SPRR2AP35326 72 aa7.81□□□□□ -1.16
CHPT1-202ENST00000546490 KRTAP2-4Q9BYR9 128 aa7.81□□□□□ -1.16
CHPT1-202ENST00000546490 KRTAP8-1Q8IUC2 63 aa7.78□□□□□ -1.16
CHPT1-202ENST00000546490 M0QZ58 72 aa7.77□□□□□ -1.17
CHPT1-202ENST00000546490 P0C880 135 aa7.77□□□□□ -1.17
CHPT1-202ENST00000546490 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
CHPT1-202ENST00000546490 H3BPC8 53 aa7.73□□□□□ -1.17
CHPT1-202ENST00000546490 DMAC1Q96GE9 116 aa7.72□□□□□ -1.17
CHPT1-202ENST00000546490 LINC01554Q52M75 96 aa7.66□□□□□ -1.18
CHPT1-202ENST00000546490 LCE1AQ5T7P2 110 aa7.65□□□□□ -1.18
CHPT1-202ENST00000546490 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
CHPT1-202ENST00000546490 SCGB1A1P11684 91 aa7.6□□□□□ -1.19
CHPT1-202ENST00000546490 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
CHPT1-202ENST00000546490 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
CHPT1-202ENST00000546490 TRAV7A0A075B6U4 112 aa7.56□□□□□ -1.2
CHPT1-202ENST00000546490 SPRR2DP22532 72 aa7.55□□□□□ -1.2
CHPT1-202ENST00000546490 KRTAP2-2Q9BYT5 123 aa7.55□□□□□ -1.2
CHPT1-202ENST00000546490 KRTAP2-1Q9BYU5 128 aa7.55□□□□□ -1.2
CHPT1-202ENST00000546490 J3QR89 54 aa7.54□□□□□ -1.2
CHPT1-202ENST00000546490 A0A1B0GV90 55 aa7.52□□□□□ -1.21
CHPT1-202ENST00000546490 KRTAP10-7P60409 375 aaPredicted RBP7.51□□□□□ -1.21
CHPT1-202ENST00000546490 MT-ATP8P03928 68 aa7.49□□□□□ -1.21
CHPT1-202ENST00000546490 ACYP2P14621 99 aa7.48□□□□□ -1.21
CHPT1-202ENST00000546490 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
CHPT1-202ENST00000546490 SPTSSBQ8NFR3 76 aa7.48□□□□□ -1.21
CHPT1-202ENST00000546490 CHKB-CPT1BH3BT56 60 aa7.37□□□□□ -1.23
CHPT1-202ENST00000546490 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
CHPT1-202ENST00000546490 SMIM20Q8N5G0 67 aa7.35□□□□□ -1.23
CHPT1-202ENST00000546490 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
CHPT1-202ENST00000546490 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
CHPT1-202ENST00000546490 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
CHPT1-202ENST00000546490 SPANXA2-OT1Q8N9U9 137 aa7.16□□□□□ -1.26
CHPT1-202ENST00000546490 K7ERU9 68 aa7.13□□□□□ -1.27
CHPT1-202ENST00000546490 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
CHPT1-202ENST00000546490 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
CHPT1-202ENST00000546490 DSTQ03001 7570 aaKnown RBP7.01□□□□□ -1.29
CHPT1-202ENST00000546490 MT1EP04732 61 aa7□□□□□ -1.29
CHPT1-202ENST00000546490 SERP2Q8N6R1 65 aa7□□□□□ -1.29
CHPT1-202ENST00000546490 KRTAP19-3Q7Z4W3 81 aa6.99□□□□□ -1.29
CHPT1-202ENST00000546490 COA5Q86WW8 74 aa6.97□□□□□ -1.29
CHPT1-202ENST00000546490 SEC61GP60059 68 aa6.96□□□□□ -1.3
CHPT1-202ENST00000546490 A0A0D9SG42 100 aa6.95□□□□□ -1.3
CHPT1-202ENST00000546490 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
CHPT1-202ENST00000546490 GPR98Q8WXG9 6306 aa6.89□□□□□ -1.31
CHPT1-202ENST00000546490 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
CHPT1-202ENST00000546490 SPINT4Q6UDR6 99 aa6.88□□□□□ -1.31
CHPT1-202ENST00000546490 KRTAP4-9Q9BYQ8 210 aa6.86□□□□□ -1.31
CHPT1-202ENST00000546490 CYSTM1Q9H1C7 97 aa6.85□□□□□ -1.31
CHPT1-202ENST00000546490 A0A1B0GU33 70 aa6.83□□□□□ -1.32
CHPT1-202ENST00000546490 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
CHPT1-202ENST00000546490 MT1GP13640 62 aa6.79□□□□□ -1.32
CHPT1-202ENST00000546490 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
CHPT1-202ENST00000546490 PP632Q6XCG6 107 aa6.78□□□□□ -1.32
CHPT1-202ENST00000546490 COX7CP15954 63 aa6.71□□□□□ -1.34
CHPT1-202ENST00000546490 LCE1DQ5T752 114 aa6.7□□□□□ -1.34
CHPT1-202ENST00000546490 MT1MQ8N339 61 aa6.68□□□□□ -1.34
CHPT1-202ENST00000546490 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
CHPT1-202ENST00000546490 H7BZZ5 65 aa6.66□□□□□ -1.34
CHPT1-202ENST00000546490 LCE4AQ5TA78 99 aa6.66□□□□□ -1.34
CHPT1-202ENST00000546490 MT1LQ93083 61 aa6.65□□□□□ -1.34
CHPT1-202ENST00000546490 A0A1B0GU69 56 aa6.64□□□□□ -1.35
CHPT1-202ENST00000546490 HMCN1Q96RW7 5635 aa6.64□□□□□ -1.35
CHPT1-202ENST00000546490 MT4P47944 62 aa6.6□□□□□ -1.35
CHPT1-202ENST00000546490 A8MU10 97 aa6.57□□□□□ -1.36
CHPT1-202ENST00000546490 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
CHPT1-202ENST00000546490 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
CHPT1-202ENST00000546490 TNP1P09430 55 aa6.56□□□□□ -1.36
CHPT1-202ENST00000546490 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
CHPT1-202ENST00000546490 KRTAP5-4Q6L8H1 288 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms