RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
ATXN2-216ENST00000546483 K7ERS5 55 aa6.55□□□□□ -1.36
ATXN2-216ENST00000546483 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
ATXN2-216ENST00000546483 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
ATXN2-216ENST00000546483 RYR1P21817 5038 aa6.54□□□□□ -1.36
ATXN2-216ENST00000546483 SMR3BP02814 79 aaPredicted RBP6.53□□□□□ -1.36
ATXN2-216ENST00000546483 FAT1Q14517 4588 aa6.52□□□□□ -1.37
ATXN2-216ENST00000546483 HSPG2P98160 4391 aa6.52□□□□□ -1.37
ATXN2-216ENST00000546483 KIAA1109Q2LD37 5005 aa6.5□□□□□ -1.37
ATXN2-216ENST00000546483 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
ATXN2-216ENST00000546483 COX6B2Q6YFQ2 88 aa6.49□□□□□ -1.37
ATXN2-216ENST00000546483 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
ATXN2-216ENST00000546483 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.38
ATXN2-216ENST00000546483 P0C880 135 aa6.45□□□□□ -1.38
ATXN2-216ENST00000546483 Q5VSD8 79 aa6.43□□□□□ -1.38
ATXN2-216ENST00000546483 KRTAP10-4P60372 401 aaPredicted RBP6.41□□□□□ -1.38
ATXN2-216ENST00000546483 RPL37P61927 97 aaKnown RBP6.4□□□□□ -1.38
ATXN2-216ENST00000546483 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
ATXN2-216ENST00000546483 KRTAP10-6P60371 365 aaPredicted RBP6.37□□□□□ -1.39
ATXN2-216ENST00000546483 C9orf92A6NGG3 77 aa6.37□□□□□ -1.39
ATXN2-216ENST00000546483 CRIPTQ9P021 101 aa6.37□□□□□ -1.39
ATXN2-216ENST00000546483 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
ATXN2-216ENST00000546483 HERC2O95714 4834 aa6.34□□□□□ -1.39
ATXN2-216ENST00000546483 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
ATXN2-216ENST00000546483 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
ATXN2-216ENST00000546483 FLG2Q5D862 2391 aaPredicted RBP6.31□□□□□ -1.4
ATXN2-216ENST00000546483 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
ATXN2-216ENST00000546483 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
ATXN2-216ENST00000546483 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
ATXN2-216ENST00000546483 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
ATXN2-216ENST00000546483 MYCBP2O75592 4640 aa6.26□□□□□ -1.41
ATXN2-216ENST00000546483 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
ATXN2-216ENST00000546483 ABCA13Q86UQ4 5058 aa6.25□□□□□ -1.41
ATXN2-216ENST00000546483 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
ATXN2-216ENST00000546483 TNXBP22105 4242 aa6.2□□□□□ -1.42
ATXN2-216ENST00000546483 A0A0D9SG42 100 aa6.18□□□□□ -1.42
ATXN2-216ENST00000546483 S4R3F8 94 aa6.18□□□□□ -1.42
ATXN2-216ENST00000546483 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
ATXN2-216ENST00000546483 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.42
ATXN2-216ENST00000546483 XP32Q5T750 250 aa6.14□□□□□ -1.43
ATXN2-216ENST00000546483 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
ATXN2-216ENST00000546483 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
ATXN2-216ENST00000546483 DMBT1Q9UGM3 2413 aaPredicted RBP6.12□□□□□ -1.43
ATXN2-216ENST00000546483 NDUFAF8A1L188 74 aa6.11□□□□□ -1.43
ATXN2-216ENST00000546483 PCLOQ9Y6V0 5065 aa6.1□□□□□ -1.43
ATXN2-216ENST00000546483 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
ATXN2-216ENST00000546483 M0QZ58 72 aa6.03□□□□□ -1.44
ATXN2-216ENST00000546483 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
ATXN2-216ENST00000546483 HERC1Q15751 4861 aa5.94□□□□□ -1.46
ATXN2-216ENST00000546483 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
ATXN2-216ENST00000546483 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
ATXN2-216ENST00000546483 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
ATXN2-216ENST00000546483 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
ATXN2-216ENST00000546483 LPAP08519 4548 aa5.8□□□□□ -1.48
ATXN2-216ENST00000546483 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
ATXN2-216ENST00000546483 LRP2P98164 4655 aa5.76□□□□□ -1.49
ATXN2-216ENST00000546483 LCE3BQ5TA77 95 aa5.71□□□□□ -1.5
ATXN2-216ENST00000546483 R4GN34 69 aa5.71□□□□□ -1.5
ATXN2-216ENST00000546483 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
ATXN2-216ENST00000546483 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
ATXN2-216ENST00000546483 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
ATXN2-216ENST00000546483 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
ATXN2-216ENST00000546483 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
ATXN2-216ENST00000546483 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
ATXN2-216ENST00000546483 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
ATXN2-216ENST00000546483 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
ATXN2-216ENST00000546483 KRTAP19-1Q8IUB9 90 aa5.51□□□□□ -1.53
ATXN2-216ENST00000546483 MUC2Q02817 5179 aa5.5□□□□□ -1.53
ATXN2-216ENST00000546483 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
ATXN2-216ENST00000546483 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
ATXN2-216ENST00000546483 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.53
ATXN2-216ENST00000546483 CAMK2N1Q7Z7J9 78 aa5.43□□□□□ -1.54
ATXN2-216ENST00000546483 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
ATXN2-216ENST00000546483 TNP1P09430 55 aa5.34□□□□□ -1.55
ATXN2-216ENST00000546483 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
ATXN2-216ENST00000546483 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
ATXN2-216ENST00000546483 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
ATXN2-216ENST00000546483 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
ATXN2-216ENST00000546483 MT1HP80294 61 aa5.17□□□□□ -1.58
ATXN2-216ENST00000546483 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
ATXN2-216ENST00000546483 M0R2T5 61 aa5.15□□□□□ -1.59
ATXN2-216ENST00000546483 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
ATXN2-216ENST00000546483 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
ATXN2-216ENST00000546483 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
ATXN2-216ENST00000546483 INE1O15225 51 aa5.05□□□□□ -1.6
ATXN2-216ENST00000546483 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
ATXN2-216ENST00000546483 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
ATXN2-216ENST00000546483 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
ATXN2-216ENST00000546483 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.61
ATXN2-216ENST00000546483 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
ATXN2-216ENST00000546483 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
ATXN2-216ENST00000546483 MT2AP02795 61 aa4.93□□□□□ -1.62
ATXN2-216ENST00000546483 KRTAP10-10P60014 251 aa4.9□□□□□ -1.62
ATXN2-216ENST00000546483 MT1FP04733 61 aa4.9□□□□□ -1.63
ATXN2-216ENST00000546483 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
ATXN2-216ENST00000546483 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
ATXN2-216ENST00000546483 KRTAP19-8Q3LI54 63 aa4.8□□□□□ -1.64
ATXN2-216ENST00000546483 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
ATXN2-216ENST00000546483 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
ATXN2-216ENST00000546483 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms