RNA–Protein interactions for RNA: ENST00000546355.3

RFLNA-205, Transcript of refilin A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RFLNA, Length 2,354 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFLNA-205ENST00000546355 SPATA8Q6RVD6 105 aa12.85□□□□□ -0.35
RFLNA-205ENST00000546355 KTN1-AS1Q86SY8 53 aa12.71□□□□□ -0.38
RFLNA-205ENST00000546355 KRTAP4-5Q9BYR2 181 aa12.63□□□□□ -0.39
RFLNA-205ENST00000546355 A0A1B0GU33 70 aa12.58□□□□□ -0.4
RFLNA-205ENST00000546355 TPRXLQ17RH7 258 aa12.56□□□□□ -0.4
RFLNA-205ENST00000546355 H0YAA0 97 aa12.55□□□□□ -0.4
RFLNA-205ENST00000546355 H1FX-AS1Q4G0G2 97 aa12.54□□□□□ -0.4
RFLNA-205ENST00000546355 KRTAP3-3Q9BYR6 98 aa12.53□□□□□ -0.4
RFLNA-205ENST00000546355 S4R3F8 94 aa12.5□□□□□ -0.41
RFLNA-205ENST00000546355 LRP2P98164 4655 aa12.49□□□□□ -0.41
RFLNA-205ENST00000546355 LPAP08519 4548 aa12.47□□□□□ -0.41
RFLNA-205ENST00000546355 ABCA13Q86UQ4 5058 aa12.46□□□□□ -0.41
RFLNA-205ENST00000546355 KRTAP10-6P60371 365 aaPredicted RBP12.32□□□□□ -0.44
RFLNA-205ENST00000546355 ADM2Q7Z4H4 148 aa12.32□□□□□ -0.44
RFLNA-205ENST00000546355 PRAC1Q96KF2 57 aa12.3□□□□□ -0.44
RFLNA-205ENST00000546355 RBM12B-AS1Q9P1G2 102 aa12.28□□□□□ -0.44
RFLNA-205ENST00000546355 KRTAP3-2Q9BYR7 98 aa12.26□□□□□ -0.45
RFLNA-205ENST00000546355 J3QL48 77 aa12.25□□□□□ -0.45
RFLNA-205ENST00000546355 P0C880 135 aa12.16□□□□□ -0.46
RFLNA-205ENST00000546355 KRTAP13-4Q3LI77 160 aa12.16□□□□□ -0.46
RFLNA-205ENST00000546355 HERC2O95714 4834 aa12.16□□□□□ -0.46
RFLNA-205ENST00000546355 SEC61BP60468 96 aaKnown RBP12.12□□□□□ -0.47
RFLNA-205ENST00000546355 CSAG1Q6PB30 78 aa12.1□□□□□ -0.47
RFLNA-205ENST00000546355 A0A0D9SG42 100 aa12.07□□□□□ -0.48
RFLNA-205ENST00000546355 K7ERS5 55 aa12.07□□□□□ -0.48
RFLNA-205ENST00000546355 BIRC6Q9NR09 4857 aa11.99□□□□□ -0.49
RFLNA-205ENST00000546355 KRTAP4-1Q9BYQ7 146 aa11.96□□□□□ -0.49
RFLNA-205ENST00000546355 MUC17Q685J3 4493 aa11.95□□□□□ -0.5
RFLNA-205ENST00000546355 M0QZ58 72 aa11.74□□□□□ -0.53
RFLNA-205ENST00000546355 KRTAP12-2P59991 146 aa11.74□□□□□ -0.53
RFLNA-205ENST00000546355 ROMO1P60602 79 aa11.74□□□□□ -0.53
RFLNA-205ENST00000546355 LINC01554Q52M75 96 aa11.71□□□□□ -0.53
RFLNA-205ENST00000546355 SPINT4Q6UDR6 99 aa11.69□□□□□ -0.54
RFLNA-205ENST00000546355 KRTAP25-1Q3LHN0 102 aa11.69□□□□□ -0.54
RFLNA-205ENST00000546355 CRIPTQ9P021 101 aa11.69□□□□□ -0.54
RFLNA-205ENST00000546355 KRTAP12-1P59990 96 aa11.67□□□□□ -0.54
RFLNA-205ENST00000546355 KRTAP19-2Q3LHN2 52 aa11.67□□□□□ -0.54
RFLNA-205ENST00000546355 R4GN34 69 aa11.59□□□□□ -0.55
RFLNA-205ENST00000546355 MUC2Q02817 5179 aa11.58□□□□□ -0.56
RFLNA-205ENST00000546355 PCLOQ9Y6V0 5065 aa11.58□□□□□ -0.56
RFLNA-205ENST00000546355 HERC1Q15751 4861 aa11.58□□□□□ -0.56
RFLNA-205ENST00000546355 LORP23490 312 aaPredicted RBP11.51□□□□□ -0.57
RFLNA-205ENST00000546355 HMCN2Q8NDA2 5059 aa11.48□□□□□ -0.57
RFLNA-205ENST00000546355 FLGP20930 4061 aaPredicted RBP11.36□□□□□ -0.59
RFLNA-205ENST00000546355 H3BS24 57 aa11.36□□□□□ -0.59
RFLNA-205ENST00000546355 C10orf95Q9H7T3 257 aa11.33□□□□□ -0.6
RFLNA-205ENST00000546355 LCE2CQ5TA81 110 aa11.12□□□□□ -0.63
RFLNA-205ENST00000546355 FAT4Q6V0I7 4981 aa11.06□□□□□ -0.64
RFLNA-205ENST00000546355 UBR4Q5T4S7 5183 aa10.98□□□□□ -0.65
RFLNA-205ENST00000546355 CAMK2N1Q7Z7J9 78 aa10.97□□□□□ -0.65
RFLNA-205ENST00000546355 RNF213Q63HN8 5207 aa10.97□□□□□ -0.65
RFLNA-205ENST00000546355 M0R2T5 61 aa10.91□□□□□ -0.66
RFLNA-205ENST00000546355 MT1HP80294 61 aa10.86□□□□□ -0.67
RFLNA-205ENST00000546355 SPRR2GQ9BYE4 73 aa10.68□□□□□ -0.7
RFLNA-205ENST00000546355 KRTAP19-1Q8IUB9 90 aa10.66□□□□□ -0.7
RFLNA-205ENST00000546355 MT2AP02795 61 aa10.61□□□□□ -0.71
RFLNA-205ENST00000546355 MT1FP04733 61 aa10.6□□□□□ -0.71
RFLNA-205ENST00000546355 KRTAP10-10P60014 251 aa10.6□□□□□ -0.71
RFLNA-205ENST00000546355 KRTAP15-1Q3LI76 137 aa10.55□□□□□ -0.72
RFLNA-205ENST00000546355 PLAC4Q8WY50 150 aa10.55□□□□□ -0.72
RFLNA-205ENST00000546355 KRTAP9-8Q9BYQ0 159 aa10.55□□□□□ -0.72
RFLNA-205ENST00000546355 PP632Q6XCG6 107 aa10.49□□□□□ -0.73
RFLNA-205ENST00000546355 TNP1P09430 55 aa10.48□□□□□ -0.73
RFLNA-205ENST00000546355 KRTAP19-8Q3LI54 63 aa10.26□□□□□ -0.77
RFLNA-205ENST00000546355 KRTAP23-1A1A580 65 aa10.21□□□□□ -0.77
RFLNA-205ENST00000546355 NDUFAF8A1L188 74 aa10.17□□□□□ -0.78
RFLNA-205ENST00000546355 MT1BP07438 61 aa10.16□□□□□ -0.78
RFLNA-205ENST00000546355 KRTAP9-3Q9BYQ3 159 aa10.12□□□□□ -0.79
RFLNA-205ENST00000546355 KRTAP10-5P60370 271 aa10.01□□□□□ -0.81
RFLNA-205ENST00000546355 MT1XP80297 61 aa10.01□□□□□ -0.81
RFLNA-205ENST00000546355 LCE3AQ5TA76 89 aa9.99□□□□□ -0.81
RFLNA-205ENST00000546355 LCE2AQ5TA79 106 aaPredicted RBP9.83□□□□□ -0.84
RFLNA-205ENST00000546355 A0A0A0MQY5 61 aa9.78□□□□□ -0.84
RFLNA-205ENST00000546355 LCE2BO14633 110 aa9.78□□□□□ -0.84
RFLNA-205ENST00000546355 LUZP6Q538Z0 58 aa9.74□□□□□ -0.85
RFLNA-205ENST00000546355 KRTAP10-12P60413 245 aa9.73□□□□□ -0.85
RFLNA-205ENST00000546355 KRTAP10-7P60409 375 aaPredicted RBP9.72□□□□□ -0.85
RFLNA-205ENST00000546355 PRO2289Q9P1D8 64 aa9.71□□□□□ -0.85
RFLNA-205ENST00000546355 KRTAP8-1Q8IUC2 63 aa9.7□□□□□ -0.86
RFLNA-205ENST00000546355 SPRR5A0A1B0GTR4 108 aa9.63□□□□□ -0.87
RFLNA-205ENST00000546355 USH2AO75445 5202 aa9.59□□□□□ -0.87
RFLNA-205ENST00000546355 KRTAP12-3P60328 96 aa9.52□□□□□ -0.89
RFLNA-205ENST00000546355 KRTAP19-5Q3LI72 72 aa9.26□□□□□ -0.93
RFLNA-205ENST00000546355 KMT2DO14686 5537 aa9.25□□□□□ -0.93
RFLNA-205ENST00000546355 KRTAP4-8A0A0G2JLE6 195 aa9.2□□□□□ -0.94
RFLNA-205ENST00000546355 KRTAP4-8Q9BYQ9 185 aa9.2□□□□□ -0.94
RFLNA-205ENST00000546355 SSPOA2VEC9 5147 aa9.04□□□□□ -0.96
RFLNA-205ENST00000546355 LCE3CQ5T5A8 94 aa8.93□□□□□ -0.98
RFLNA-205ENST00000546355 KRTAP19-7Q3SYF9 63 aa8.92□□□□□ -0.98
RFLNA-205ENST00000546355 KRTAP19-6Q3LI70 58 aa8.88□□□□□ -0.99
RFLNA-205ENST00000546355 FSIP2Q5CZC0 6907 aa8.87□□□□□ -0.99
RFLNA-205ENST00000546355 MT1EP04732 61 aa8.7□□□□□ -1.02
RFLNA-205ENST00000546355 KRTAP4-7Q9BYR0 210 aa8.65□□□□□ -1.02
RFLNA-205ENST00000546355 MT1LQ93083 61 aa8.64□□□□□ -1.03
RFLNA-205ENST00000546355 KRTAP9-6A8MVA2 160 aa8.58□□□□□ -1.04
RFLNA-205ENST00000546355 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
RFLNA-205ENST00000546355 KRTAP19-4Q3LI73 84 aa8.49□□□□□ -1.05
RFLNA-205ENST00000546355 FCGBPQ9Y6R7 5405 aaPredicted RBP8.49□□□□□ -1.05
RFLNA-205ENST00000546355 MUC12Q9UKN1 5478 aa8.28□□□□□ -1.08
RFLNA-205ENST00000546355 KRTAP4-3Q9BYR4 195 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 230 ms