RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
PRKDC-211ENST00000546304 LINC00643Q86TS7 51 aa3.32□□□□□ -1.88
PRKDC-211ENST00000546304 K7ERU9 68 aa3.31□□□□□ -1.88
PRKDC-211ENST00000546304 PSPHP1O15172 72 aa3.31□□□□□ -1.88
PRKDC-211ENST00000546304 ZCCHC13Q8WW36 166 aaKnown RBP3.31□□□□□ -1.88
PRKDC-211ENST00000546304 ANAPC13Q9BS18 74 aa3.31□□□□□ -1.88
PRKDC-211ENST00000546304 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
PRKDC-211ENST00000546304 HIST1H4AP62805 103 aaKnown RBP3.29□□□□□ -1.88
PRKDC-211ENST00000546304 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
PRKDC-211ENST00000546304 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
PRKDC-211ENST00000546304 A0A087WVE0 104 aa3.27□□□□□ -1.89
PRKDC-211ENST00000546304 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
PRKDC-211ENST00000546304 SPINK7P58062 85 aa3.24□□□□□ -1.89
PRKDC-211ENST00000546304 Q5W150 140 aa3.24□□□□□ -1.89
PRKDC-211ENST00000546304 TP53AIP1Q9HCN2 124 aa3.24□□□□□ -1.89
PRKDC-211ENST00000546304 MT-ATP8P03928 68 aa3.23□□□□□ -1.89
PRKDC-211ENST00000546304 HRES1P13985 223 aa3.23□□□□□ -1.89
PRKDC-211ENST00000546304 MP68P56378 58 aa3.23□□□□□ -1.89
PRKDC-211ENST00000546304 COX6B2Q6YFQ2 88 aa3.23□□□□□ -1.89
PRKDC-211ENST00000546304 C7orf65Q6ZTY9 151 aa3.23□□□□□ -1.89
PRKDC-211ENST00000546304 FAM236DA0A1B0GTK5 79 aa3.22□□□□□ -1.89
PRKDC-211ENST00000546304 FAM236CP0DP71 79 aa3.22□□□□□ -1.89
PRKDC-211ENST00000546304 TRAV22A0A0B4J277 110 aa3.21□□□□□ -1.9
PRKDC-211ENST00000546304 IMUPQ9GZP8 106 aa3.21□□□□□ -1.9
PRKDC-211ENST00000546304 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
PRKDC-211ENST00000546304 RBM12B-AS1Q9P1G2 102 aa3.2□□□□□ -1.9
PRKDC-211ENST00000546304 UQCRQO14949 82 aa3.19□□□□□ -1.9
PRKDC-211ENST00000546304 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
PRKDC-211ENST00000546304 FAM236AA0A1B0GUQ0 79 aa3.18□□□□□ -1.9
PRKDC-211ENST00000546304 FAM236BA0A1B0GV22 79 aa3.18□□□□□ -1.9
PRKDC-211ENST00000546304 H0Y9P7 68 aa3.18□□□□□ -1.9
PRKDC-211ENST00000546304 MT1HP80294 61 aa3.18□□□□□ -1.9
PRKDC-211ENST00000546304 LOC101927531A0A1B0GV80 90 aa3.17□□□□□ -1.9
PRKDC-211ENST00000546304 ATOX1O00244 68 aa3.17□□□□□ -1.9
PRKDC-211ENST00000546304 RPS28P62857 69 aaKnown RBP3.16□□□□□ -1.9
PRKDC-211ENST00000546304 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
PRKDC-211ENST00000546304 CYP4F30PQ9H0H9 118 aa3.14□□□□□ -1.91
PRKDC-211ENST00000546304 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
PRKDC-211ENST00000546304 M0R2T5 61 aa3.13□□□□□ -1.91
PRKDC-211ENST00000546304 C1orf64Q8NEQ6 169 aa3.13□□□□□ -1.91
PRKDC-211ENST00000546304 LINC00208Q96KT6 92 aa3.13□□□□□ -1.91
PRKDC-211ENST00000546304 TRAV7A0A075B6U4 112 aa3.11□□□□□ -1.91
PRKDC-211ENST00000546304 H3BPC8 53 aa3.11□□□□□ -1.91
PRKDC-211ENST00000546304 H1FX-AS1Q4G0G2 97 aa3.1□□□□□ -1.91
PRKDC-211ENST00000546304 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
PRKDC-211ENST00000546304 K7ERS5 55 aa3.08□□□□□ -1.92
PRKDC-211ENST00000546304 KLKP1Q107X0 134 aa3.08□□□□□ -1.92
PRKDC-211ENST00000546304 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
PRKDC-211ENST00000546304 SERP2Q8N6R1 65 aa3.07□□□□□ -1.92
PRKDC-211ENST00000546304 S4R3F8 94 aa3.06□□□□□ -1.92
PRKDC-211ENST00000546304 A8MUN3 132 aa3.05□□□□□ -1.92
PRKDC-211ENST00000546304 C20orf197Q8N268 126 aa3.05□□□□□ -1.92
PRKDC-211ENST00000546304 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
PRKDC-211ENST00000546304 SNURFQ9Y675 71 aa3.04□□□□□ -1.92
PRKDC-211ENST00000546304 LCA10Q71F78 164 aa3.03□□□□□ -1.92
PRKDC-211ENST00000546304 COX7CP15954 63 aa3.02□□□□□ -1.93
PRKDC-211ENST00000546304 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
PRKDC-211ENST00000546304 DMAC1Q96GE9 116 aa3.02□□□□□ -1.93
PRKDC-211ENST00000546304 MT2AP02795 61 aa3.01□□□□□ -1.93
PRKDC-211ENST00000546304 USH2AO75445 5202 aa2.99□□□□□ -1.93
PRKDC-211ENST00000546304 MT1FP04733 61 aa2.99□□□□□ -1.93
PRKDC-211ENST00000546304 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
PRKDC-211ENST00000546304 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
PRKDC-211ENST00000546304 SPANXA2-OT1Q8N9U9 137 aa2.98□□□□□ -1.93
PRKDC-211ENST00000546304 NDUFC1O43677 76 aa2.97□□□□□ -1.93
PRKDC-211ENST00000546304 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
PRKDC-211ENST00000546304 A6NED7 52 aa2.96□□□□□ -1.94
PRKDC-211ENST00000546304 KRTAP10-10P60014 251 aa2.96□□□□□ -1.94
PRKDC-211ENST00000546304 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
PRKDC-211ENST00000546304 CYSTM1Q9H1C7 97 aa2.96□□□□□ -1.94
PRKDC-211ENST00000546304 H7BZZ5 65 aa2.95□□□□□ -1.94
PRKDC-211ENST00000546304 ACYP2P14621 99 aa2.95□□□□□ -1.94
PRKDC-211ENST00000546304 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
PRKDC-211ENST00000546304 CCDC179H3BU77 68 aa2.94□□□□□ -1.94
PRKDC-211ENST00000546304 SSPOA2VEC9 5147 aa2.94□□□□□ -1.94
PRKDC-211ENST00000546304 LINC01554Q52M75 96 aa2.93□□□□□ -1.94
PRKDC-211ENST00000546304 CHKB-CPT1BH3BT56 60 aa2.92□□□□□ -1.94
PRKDC-211ENST00000546304 H0YAA0 97 aa2.91□□□□□ -1.94
PRKDC-211ENST00000546304 SPTSSBQ8NFR3 76 aa2.9□□□□□ -1.95
PRKDC-211ENST00000546304 COA5Q86WW8 74 aa2.89□□□□□ -1.95
PRKDC-211ENST00000546304 ATP5EP56381 51 aaPredicted RBP2.88□□□□□ -1.95
PRKDC-211ENST00000546304 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
PRKDC-211ENST00000546304 TMEM258P61165 79 aa2.86□□□□□ -1.95
PRKDC-211ENST00000546304 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
PRKDC-211ENST00000546304 CRIPTQ9P021 101 aa2.85□□□□□ -1.95
PRKDC-211ENST00000546304 P0C880 135 aa2.84□□□□□ -1.95
PRKDC-211ENST00000546304 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
PRKDC-211ENST00000546304 A8MU10 97 aa2.83□□□□□ -1.96
PRKDC-211ENST00000546304 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
PRKDC-211ENST00000546304 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
PRKDC-211ENST00000546304 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
PRKDC-211ENST00000546304 R4GN34 69 aa2.8□□□□□ -1.96
PRKDC-211ENST00000546304 M0QZ58 72 aa2.79□□□□□ -1.96
PRKDC-211ENST00000546304 KRTAP12-2P59991 146 aa2.79□□□□□ -1.96
PRKDC-211ENST00000546304 Q5VV11 94 aa2.79□□□□□ -1.96
PRKDC-211ENST00000546304 MT1BP07438 61 aa2.78□□□□□ -1.96
PRKDC-211ENST00000546304 SERP1Q9Y6X1 66 aa2.76□□□□□ -1.97
PRKDC-211ENST00000546304 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
PRKDC-211ENST00000546304 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
PRKDC-211ENST00000546304 A0A1B0GU69 56 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms