RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 KRTAP10-2P60368 255 aa5.22□□□□□ -1.57
UBC-213ENST00000546120 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
UBC-213ENST00000546120 DNAH2Q9P225 4427 aa5.2□□□□□ -1.58
UBC-213ENST00000546120 A0A0D9SG42 100 aa5.2□□□□□ -1.58
UBC-213ENST00000546120 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
UBC-213ENST00000546120 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
UBC-213ENST00000546120 FAT2Q9NYQ8 4349 aa5.17□□□□□ -1.58
UBC-213ENST00000546120 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
UBC-213ENST00000546120 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
UBC-213ENST00000546120 KRTAP12-1P59990 96 aa5.15□□□□□ -1.59
UBC-213ENST00000546120 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
UBC-213ENST00000546120 PKD1P98161 4303 aa5.14□□□□□ -1.59
UBC-213ENST00000546120 DYNC1H1Q14204 4646 aaKnown RBP5.13□□□□□ -1.59
UBC-213ENST00000546120 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
UBC-213ENST00000546120 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
UBC-213ENST00000546120 PKHD1P08F94 4074 aa5.11□□□□□ -1.59
UBC-213ENST00000546120 KRTAP12-2P59991 146 aa5.11□□□□□ -1.59
UBC-213ENST00000546120 DNAH11Q96DT5 4516 aa5.1□□□□□ -1.59
UBC-213ENST00000546120 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
UBC-213ENST00000546120 HERC2O95714 4834 aa5.1□□□□□ -1.59
UBC-213ENST00000546120 KIAA1109Q2LD37 5005 aa5.08□□□□□ -1.6
UBC-213ENST00000546120 FLG2Q5D862 2391 aaPredicted RBP5.08□□□□□ -1.6
UBC-213ENST00000546120 LORP23490 312 aaPredicted RBP5.04□□□□□ -1.6
UBC-213ENST00000546120 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
UBC-213ENST00000546120 RYR1P21817 5038 aa5.03□□□□□ -1.6
UBC-213ENST00000546120 LRP1BQ9NZR2 4599 aa5.02□□□□□ -1.61
UBC-213ENST00000546120 KRTAP17-1Q9BYP8 105 aa5.02□□□□□ -1.61
UBC-213ENST00000546120 DNAH5Q8TE73 4624 aa5.01□□□□□ -1.61
UBC-213ENST00000546120 HSPG2P98160 4391 aa5□□□□□ -1.61
UBC-213ENST00000546120 APOBP04114 4563 aaKnown RBP4.99□□□□□ -1.61
UBC-213ENST00000546120 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
UBC-213ENST00000546120 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
UBC-213ENST00000546120 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
UBC-213ENST00000546120 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
UBC-213ENST00000546120 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
UBC-213ENST00000546120 KRTAP10-4P60372 401 aaPredicted RBP4.92□□□□□ -1.62
UBC-213ENST00000546120 R4GN34 69 aa4.89□□□□□ -1.63
UBC-213ENST00000546120 VPS13BQ7Z7G8 4022 aa4.88□□□□□ -1.63
UBC-213ENST00000546120 SMR3BP02814 79 aaPredicted RBP4.88□□□□□ -1.63
UBC-213ENST00000546120 KRTAP10-8P60410 259 aa4.88□□□□□ -1.63
UBC-213ENST00000546120 FAT1Q14517 4588 aa4.87□□□□□ -1.63
UBC-213ENST00000546120 PKHD1L1Q86WI1 4243 aa4.85□□□□□ -1.63
UBC-213ENST00000546120 Q5VSD8 79 aa4.85□□□□□ -1.63
UBC-213ENST00000546120 DMBT1Q9UGM3 2413 aaPredicted RBP4.77□□□□□ -1.65
UBC-213ENST00000546120 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
UBC-213ENST00000546120 HERC1Q15751 4861 aa4.74□□□□□ -1.65
UBC-213ENST00000546120 MYCBP2O75592 4640 aa4.74□□□□□ -1.65
UBC-213ENST00000546120 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
UBC-213ENST00000546120 INE1O15225 51 aa4.71□□□□□ -1.66
UBC-213ENST00000546120 FAT3Q8TDW7 4589 aa4.7□□□□□ -1.66
UBC-213ENST00000546120 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
UBC-213ENST00000546120 TNP1P09430 55 aa4.68□□□□□ -1.66
UBC-213ENST00000546120 TNXBP22105 4242 aa4.64□□□□□ -1.67
UBC-213ENST00000546120 MT1HL1P0DM35 61 aa4.58□□□□□ -1.68
UBC-213ENST00000546120 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
UBC-213ENST00000546120 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
UBC-213ENST00000546120 LRP2P98164 4655 aa4.42□□□□□ -1.7
UBC-213ENST00000546120 LPAP08519 4548 aa4.38□□□□□ -1.71
UBC-213ENST00000546120 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
UBC-213ENST00000546120 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
UBC-213ENST00000546120 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
UBC-213ENST00000546120 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
UBC-213ENST00000546120 MUC17Q685J3 4493 aa4.2□□□□□ -1.74
UBC-213ENST00000546120 MUC2Q02817 5179 aa4.18□□□□□ -1.74
UBC-213ENST00000546120 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
UBC-213ENST00000546120 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
UBC-213ENST00000546120 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
UBC-213ENST00000546120 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
UBC-213ENST00000546120 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
UBC-213ENST00000546120 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
UBC-213ENST00000546120 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
UBC-213ENST00000546120 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
UBC-213ENST00000546120 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
UBC-213ENST00000546120 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
UBC-213ENST00000546120 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
UBC-213ENST00000546120 MT1HP80294 61 aa3.89□□□□□ -1.79
UBC-213ENST00000546120 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
UBC-213ENST00000546120 M0R2T5 61 aa3.86□□□□□ -1.79
UBC-213ENST00000546120 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
UBC-213ENST00000546120 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
UBC-213ENST00000546120 MT1XP80297 61 aa3.79□□□□□ -1.8
UBC-213ENST00000546120 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
UBC-213ENST00000546120 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
UBC-213ENST00000546120 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
UBC-213ENST00000546120 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
UBC-213ENST00000546120 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
UBC-213ENST00000546120 MT2AP02795 61 aa3.74□□□□□ -1.81
UBC-213ENST00000546120 MT1BP07438 61 aa3.72□□□□□ -1.81
UBC-213ENST00000546120 MT1FP04733 61 aa3.69□□□□□ -1.82
UBC-213ENST00000546120 KRTAP9-8Q9BYQ0 159 aa3.68□□□□□ -1.82
UBC-213ENST00000546120 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
UBC-213ENST00000546120 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
UBC-213ENST00000546120 USH2AO75445 5202 aa3.62□□□□□ -1.83
UBC-213ENST00000546120 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
UBC-213ENST00000546120 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
UBC-213ENST00000546120 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
UBC-213ENST00000546120 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
UBC-213ENST00000546120 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
UBC-213ENST00000546120 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
UBC-213ENST00000546120 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms