RNA–Protein interactions for RNA: ENST00000544760.1

KDM5A-210, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-210ENST00000544760 A0A1B0GVY2 172 aa10.32□□□□□ -0.76
KDM5A-210ENST00000544760 PKHD1P08F94 4074 aa10.31□□□□□ -0.76
KDM5A-210ENST00000544760 S4R3F8 94 aa10.3□□□□□ -0.76
KDM5A-210ENST00000544760 KRTAP10-1P60331 282 aa10.29□□□□□ -0.76
KDM5A-210ENST00000544760 RPS29P62273 56 aaKnown RBP10.25□□□□□ -0.77
KDM5A-210ENST00000544760 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
KDM5A-210ENST00000544760 LRP1BQ9NZR2 4599 aa10.23□□□□□ -0.77
KDM5A-210ENST00000544760 XP32Q5T750 250 aa10.23□□□□□ -0.77
KDM5A-210ENST00000544760 DYNC1H1Q14204 4646 aaKnown RBP10.21□□□□□ -0.77
KDM5A-210ENST00000544760 KRTAP12-2P59991 146 aa10.18□□□□□ -0.78
KDM5A-210ENST00000544760 KRTAP3-3Q9BYR6 98 aa10.17□□□□□ -0.78
KDM5A-210ENST00000544760 C9orf92A6NGG3 77 aa10.16□□□□□ -0.78
KDM5A-210ENST00000544760 APOBP04114 4563 aaKnown RBP10.09□□□□□ -0.79
KDM5A-210ENST00000544760 KRTAP12-1P59990 96 aa10.07□□□□□ -0.8
KDM5A-210ENST00000544760 DMBT1Q9UGM3 2413 aaPredicted RBP10.03□□□□□ -0.8
KDM5A-210ENST00000544760 VPS13BQ7Z7G8 4022 aa10.01□□□□□ -0.81
KDM5A-210ENST00000544760 EPPK1P58107 5090 aaKnown RBP10□□□□□ -0.81
KDM5A-210ENST00000544760 SMR3BP02814 79 aaPredicted RBP9.96□□□□□ -0.82
KDM5A-210ENST00000544760 PLAC4Q8WY50 150 aa9.94□□□□□ -0.82
KDM5A-210ENST00000544760 FAT1Q14517 4588 aa9.93□□□□□ -0.82
KDM5A-210ENST00000544760 HSPG2P98160 4391 aa9.91□□□□□ -0.82
KDM5A-210ENST00000544760 RYR1P21817 5038 aa9.9□□□□□ -0.82
KDM5A-210ENST00000544760 KIAA1109Q2LD37 5005 aa9.86□□□□□ -0.83
KDM5A-210ENST00000544760 KRTAP10-4P60372 401 aaPredicted RBP9.85□□□□□ -0.83
KDM5A-210ENST00000544760 SEC61BP60468 96 aaKnown RBP9.81□□□□□ -0.84
KDM5A-210ENST00000544760 M0QZ58 72 aa9.76□□□□□ -0.85
KDM5A-210ENST00000544760 Q5VSD8 79 aa9.76□□□□□ -0.85
KDM5A-210ENST00000544760 KRTAP17-1Q9BYP8 105 aa9.75□□□□□ -0.85
KDM5A-210ENST00000544760 PKHD1L1Q86WI1 4243 aa9.73□□□□□ -0.85
KDM5A-210ENST00000544760 BIRC6Q9NR09 4857 aa9.69□□□□□ -0.86
KDM5A-210ENST00000544760 KRTAP10-8P60410 259 aa9.63□□□□□ -0.87
KDM5A-210ENST00000544760 LRP1Q07954 4544 aaKnown RBP9.54□□□□□ -0.88
KDM5A-210ENST00000544760 HERC2O95714 4834 aa9.53□□□□□ -0.88
KDM5A-210ENST00000544760 KRTAP4-5Q9BYR2 181 aa9.53□□□□□ -0.88
KDM5A-210ENST00000544760 FAT3Q8TDW7 4589 aa9.51□□□□□ -0.89
KDM5A-210ENST00000544760 MYCBP2O75592 4640 aa9.48□□□□□ -0.89
KDM5A-210ENST00000544760 TNXBP22105 4242 aa9.47□□□□□ -0.89
KDM5A-210ENST00000544760 ABCA13Q86UQ4 5058 aa9.43□□□□□ -0.9
KDM5A-210ENST00000544760 PP632Q6XCG6 107 aa9.43□□□□□ -0.9
KDM5A-210ENST00000544760 MT1HL1P0DM35 61 aa9.37□□□□□ -0.91
KDM5A-210ENST00000544760 CAMK2N1Q7Z7J9 78 aa9.34□□□□□ -0.91
KDM5A-210ENST00000544760 R4GN34 69 aa9.25□□□□□ -0.93
KDM5A-210ENST00000544760 PCLOQ9Y6V0 5065 aa9.21□□□□□ -0.94
KDM5A-210ENST00000544760 PRO2289Q9P1D8 64 aa9.19□□□□□ -0.94
KDM5A-210ENST00000544760 SPRR5A0A1B0GTR4 108 aa9.18□□□□□ -0.94
KDM5A-210ENST00000544760 J3QL48 77 aa9.16□□□□□ -0.94
KDM5A-210ENST00000544760 HERC1Q15751 4861 aa8.93□□□□□ -0.98
KDM5A-210ENST00000544760 LORP23490 312 aaPredicted RBP8.92□□□□□ -0.98
KDM5A-210ENST00000544760 KRTAP23-1A1A580 65 aa8.91□□□□□ -0.98
KDM5A-210ENST00000544760 INE1O15225 51 aa8.88□□□□□ -0.99
KDM5A-210ENST00000544760 LPAP08519 4548 aa8.86□□□□□ -0.99
KDM5A-210ENST00000544760 HMCN2Q8NDA2 5059 aa8.78□□□□□ -1
KDM5A-210ENST00000544760 LRP2P98164 4655 aa8.78□□□□□ -1
KDM5A-210ENST00000544760 TNP1P09430 55 aa8.72□□□□□ -1.01
KDM5A-210ENST00000544760 MUC17Q685J3 4493 aa8.55□□□□□ -1.04
KDM5A-210ENST00000544760 KRTAP4-1Q9BYQ7 146 aa8.43□□□□□ -1.06
KDM5A-210ENST00000544760 UBR4Q5T4S7 5183 aa8.42□□□□□ -1.06
KDM5A-210ENST00000544760 MUC2Q02817 5179 aa8.37□□□□□ -1.07
KDM5A-210ENST00000544760 RNF213Q63HN8 5207 aa8.33□□□□□ -1.08
KDM5A-210ENST00000544760 FLGP20930 4061 aaPredicted RBP8.23□□□□□ -1.09
KDM5A-210ENST00000544760 KRTAP19-2Q3LHN2 52 aa8.19□□□□□ -1.1
KDM5A-210ENST00000544760 LCE3AQ5TA76 89 aa8.12□□□□□ -1.11
KDM5A-210ENST00000544760 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
KDM5A-210ENST00000544760 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
KDM5A-210ENST00000544760 KRTAP8-1Q8IUC2 63 aa7.97□□□□□ -1.13
KDM5A-210ENST00000544760 MT1HP80294 61 aa7.9□□□□□ -1.15
KDM5A-210ENST00000544760 KRTAP10-12P60413 245 aa7.82□□□□□ -1.16
KDM5A-210ENST00000544760 M0R2T5 61 aa7.79□□□□□ -1.16
KDM5A-210ENST00000544760 SPRR2GQ9BYE4 73 aa7.79□□□□□ -1.16
KDM5A-210ENST00000544760 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
KDM5A-210ENST00000544760 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
KDM5A-210ENST00000544760 KRTAP12-3P60328 96 aa7.69□□□□□ -1.18
KDM5A-210ENST00000544760 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
KDM5A-210ENST00000544760 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.19
KDM5A-210ENST00000544760 MT2AP02795 61 aa7.54□□□□□ -1.2
KDM5A-210ENST00000544760 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
KDM5A-210ENST00000544760 MT1FP04733 61 aa7.5□□□□□ -1.21
KDM5A-210ENST00000544760 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
KDM5A-210ENST00000544760 LCE3CQ5T5A8 94 aa7.32□□□□□ -1.24
KDM5A-210ENST00000544760 MT1XP80297 61 aa7.3□□□□□ -1.24
KDM5A-210ENST00000544760 KRTAP2-3P0C7H8 128 aa7.28□□□□□ -1.24
KDM5A-210ENST00000544760 KRTAP2-4Q9BYR9 128 aa7.28□□□□□ -1.24
KDM5A-210ENST00000544760 KRTAP2-1Q9BYU5 128 aa7.28□□□□□ -1.24
KDM5A-210ENST00000544760 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
KDM5A-210ENST00000544760 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
KDM5A-210ENST00000544760 LCE2BO14633 110 aa7.15□□□□□ -1.27
KDM5A-210ENST00000544760 MT1BP07438 61 aa7.12□□□□□ -1.27
KDM5A-210ENST00000544760 KRTAP9-6A8MVA2 160 aa7.12□□□□□ -1.27
KDM5A-210ENST00000544760 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
KDM5A-210ENST00000544760 USH2AO75445 5202 aa7.05□□□□□ -1.28
KDM5A-210ENST00000544760 KRTAP19-5Q3LI72 72 aa7.04□□□□□ -1.28
KDM5A-210ENST00000544760 FSIP2Q5CZC0 6907 aa6.89□□□□□ -1.31
KDM5A-210ENST00000544760 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
KDM5A-210ENST00000544760 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
KDM5A-210ENST00000544760 KRTAP19-6Q3LI70 58 aa6.74□□□□□ -1.33
KDM5A-210ENST00000544760 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
KDM5A-210ENST00000544760 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
KDM5A-210ENST00000544760 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
KDM5A-210ENST00000544760 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
KDM5A-210ENST00000544760 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms