RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 IAPPP10997 89 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 HIST1H1DP16402 221 aaKnown RBP-0.05□□□□□ -2.42
YBX3-214ENST00000544501 RPS25P62851 125 aaKnown RBP-0.05□□□□□ -2.42
YBX3-214ENST00000544501 C10orf113Q5VZT2 155 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 FXYD6Q9H0Q3 95 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 SAR1AQ9NR31 198 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 TOMM7Q9P0U1 55 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 SCP2D1Q9UJQ7 156 aa-0.05□□□□□ -2.42
YBX3-214ENST00000544501 TRAV22A0A0B4J277 110 aa-0.06□□□□□ -2.42
YBX3-214ENST00000544501 A0A0G2JND7 137 aa-0.06□□□□□ -2.42
YBX3-214ENST00000544501 TRBV10-3A0A0K0K1G6 114 aa-0.06□□□□□ -2.42
YBX3-214ENST00000544501 MT-ATP8P03928 68 aa-0.06□□□□□ -2.42
YBX3-214ENST00000544501 S100A12P80511 92 aa-0.06□□□□□ -2.42
YBX3-214ENST00000544501 FAM107BQ9H098 131 aa-0.06□□□□□ -2.42
YBX3-214ENST00000544501 CCDC167Q9P0B6 97 aa-0.06□□□□□ -2.42
YBX3-214ENST00000544501 PAIP2BQ9ULR5 123 aaKnown RBP-0.06□□□□□ -2.42
YBX3-214ENST00000544501 UBE2L3P68036 154 aaKnown RBP-0.07□□□□□ -2.42
YBX3-214ENST00000544501 KCNRGQ8N5I3 272 aa-0.07□□□□□ -2.42
YBX3-214ENST00000544501 ANP32BQ92688 251 aaKnown RBP-0.07□□□□□ -2.42
YBX3-214ENST00000544501 PFDN5Q99471 154 aa-0.07□□□□□ -2.42
YBX3-214ENST00000544501 NMES1Q9C002 83 aa-0.07□□□□□ -2.42
YBX3-214ENST00000544501 CACFD1Q9UGQ2 172 aa-0.07□□□□□ -2.42
YBX3-214ENST00000544501 AP4S1Q9Y587 144 aa-0.07□□□□□ -2.42
YBX3-214ENST00000544501 CTXND1A0A1B0GTU2 59 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 I3L3M4 83 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 SSSCA1O60232 199 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 NDUFB6O95139 128 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 PPP1R17O96001 155 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 GNG2P59768 71 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 CCDC58Q4VC31 144 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 Q6JHZ5 121 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 BAGE3Q86Y29 109 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 ACBD7Q8N6N7 88 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 DEFB105AQ8NG35 78 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 RPL39LQ96EH5 51 aaKnown RBP-0.08□□□□□ -2.42
YBX3-214ENST00000544501 FAM167A-AS1Q96KT0 104 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 MGST2Q99735 147 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 SMIM2Q9BVW6 85 aa-0.08□□□□□ -2.42
YBX3-214ENST00000544501 HCG22E2RYF7 251 aa-0.09□□□□□ -2.42
YBX3-214ENST00000544501 PDCD5O14737 125 aa-0.09□□□□□ -2.42
YBX3-214ENST00000544501 SPINK8P0C7L1 97 aa-0.09□□□□□ -2.42
YBX3-214ENST00000544501 COX17Q14061 63 aa-0.09□□□□□ -2.42
YBX3-214ENST00000544501 SMCO1Q147U7 214 aa-0.09□□□□□ -2.42
YBX3-214ENST00000544501 C12orf73Q69YU5 71 aa-0.09□□□□□ -2.42
YBX3-214ENST00000544501 A0A087WXM4 84 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 TRAV13-2A0A0B4J235 113 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 FAM25AB3EWG3 89 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 FAM25CB3EWG5 89 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 FAM25GB3EWG6 89 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 NDUFC1O43677 76 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 FCER1GP30273 86 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 POLR2KP53803 58 aaKnown RBP-0.1□□□□□ -2.43
YBX3-214ENST00000544501 RPL39P62891 51 aaKnown RBP-0.1□□□□□ -2.43
YBX3-214ENST00000544501 C2orf88Q9BSF0 95 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 CNFNQ9BYD5 112 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 TMEM191AQ9H0A3 160 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 CYP4F30PQ9H0H9 118 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 ST20Q9HBF5 79 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 NXT2Q9NPJ8 142 aaKnown RBP-0.1□□□□□ -2.43
YBX3-214ENST00000544501 CDKN2A-AS1Q9UH64 79 aa-0.1□□□□□ -2.43
YBX3-214ENST00000544501 UBE2L5PA0A1B0GUS4 154 aa-0.11□□□□□ -2.43
YBX3-214ENST00000544501 TNP1P09430 55 aa-0.11□□□□□ -2.43
YBX3-214ENST00000544501 IFI27P40305 119 aaPredicted RBP-0.11□□□□□ -2.43
YBX3-214ENST00000544501 SEC11AP67812 179 aa-0.11□□□□□ -2.43
YBX3-214ENST00000544501 SPCS1Q9Y6A9 102 aa-0.11□□□□□ -2.43
YBX3-214ENST00000544501 V9GYH0 126 aa-0.11□□□□□ -2.43
YBX3-214ENST00000544501 LOC105371267A0A1B0GV96 52 aa-0.12□□□□□ -2.43
YBX3-214ENST00000544501 H3BUT2 72 aa-0.12□□□□□ -2.43
YBX3-214ENST00000544501 COX7BP24311 80 aa-0.12□□□□□ -2.43
YBX3-214ENST00000544501 LINC00158P58513 81 aa-0.12□□□□□ -2.43
YBX3-214ENST00000544501 TMEM170BQ5T4T1 132 aa-0.12□□□□□ -2.43
YBX3-214ENST00000544501 SFTA2Q6UW10 78 aa-0.12□□□□□ -2.43
YBX3-214ENST00000544501 PSENENQ9NZ42 101 aa-0.12□□□□□ -2.43
YBX3-214ENST00000544501 SMIM4Q8WVI0 70 aa-0.13□□□□□ -2.43
YBX3-214ENST00000544501 PIGBOS1A0A0B4J2F0 54 aa-0.14□□□□□ -2.43
YBX3-214ENST00000544501 EFCAB10A6NFE3 127 aa-0.14□□□□□ -2.43
YBX3-214ENST00000544501 GNGT2O14610 69 aa-0.14□□□□□ -2.43
YBX3-214ENST00000544501 SMIM13P0DJ93 91 aa-0.14□□□□□ -2.43
YBX3-214ENST00000544501 MRPS10P82664 201 aaKnown RBP-0.14□□□□□ -2.43
YBX3-214ENST00000544501 MEIG1Q5JSS6 88 aa-0.14□□□□□ -2.43
YBX3-214ENST00000544501 MUSTN1Q8IVN3 82 aa-0.14□□□□□ -2.43
YBX3-214ENST00000544501 MRPL34Q9BQ48 92 aaKnown RBP-0.14□□□□□ -2.43
YBX3-214ENST00000544501 TP53AIP1Q9HCN2 124 aa-0.14□□□□□ -2.43
YBX3-214ENST00000544501 TRBV7-4A0A0J9YYF1 115 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 MMP24-AS1A0A0U1RRL7 71 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 SFT2D2O95562 160 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 PRM1P04553 51 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 WHAMMP3Q1A5X7 153 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 C9orf62Q8N4C0 152 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 Q8N8P6 123 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 COPS9Q8WXC6 57 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 TCEAL7Q9BRU2 100 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 TMEM167BQ9NRX6 74 aa-0.15□□□□□ -2.43
YBX3-214ENST00000544501 hADV29S1A0JD25 119 aa-0.16□□□□□ -2.44
YBX3-214ENST00000544501 IGIPA6NJ69 53 aa-0.16□□□□□ -2.44
YBX3-214ENST00000544501 NDUFB1O75438 58 aa-0.16□□□□□ -2.44
YBX3-214ENST00000544501 S100PP25815 95 aa-0.16□□□□□ -2.44
YBX3-214ENST00000544501 BAGE2Q86Y30 109 aa-0.16□□□□□ -2.44
YBX3-214ENST00000544501 C20orf78Q9BR46 151 aa-0.16□□□□□ -2.44
YBX3-214ENST00000544501 SPANXDQ9BXN6 97 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms