RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 C10orf95Q9H7T3 257 aa8.95□□□□□ -0.98
TPBG-203ENST00000543496 KRTAP10-6P60371 365 aaPredicted RBP8.94□□□□□ -0.98
TPBG-203ENST00000543496 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
TPBG-203ENST00000543496 KRTAP13-4Q3LI77 160 aa8.94□□□□□ -0.98
TPBG-203ENST00000543496 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
TPBG-203ENST00000543496 KRTAP10-4P60372 401 aaPredicted RBP8.91□□□□□ -0.98
TPBG-203ENST00000543496 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
TPBG-203ENST00000543496 KRTAP15-1Q3LI76 137 aa8.84□□□□□ -0.99
TPBG-203ENST00000543496 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
TPBG-203ENST00000543496 A0A0A0MQY5 61 aa8.8□□□□□ -1
TPBG-203ENST00000543496 KRTAP10-8P60410 259 aa8.79□□□□□ -1
TPBG-203ENST00000543496 S4R3F8 94 aa8.79□□□□□ -1
TPBG-203ENST00000543496 HSPG2P98160 4391 aa8.76□□□□□ -1.01
TPBG-203ENST00000543496 FAT3Q8TDW7 4589 aa8.74□□□□□ -1.01
TPBG-203ENST00000543496 A0A1B0GVY2 172 aa8.74□□□□□ -1.01
TPBG-203ENST00000543496 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
TPBG-203ENST00000543496 KRTAP12-2P59991 146 aa8.68□□□□□ -1.02
TPBG-203ENST00000543496 MYCBP2O75592 4640 aa8.67□□□□□ -1.02
TPBG-203ENST00000543496 XP32Q5T750 250 aa8.66□□□□□ -1.02
TPBG-203ENST00000543496 TNXBP22105 4242 aa8.64□□□□□ -1.03
TPBG-203ENST00000543496 KRTAP12-1P59990 96 aa8.56□□□□□ -1.04
TPBG-203ENST00000543496 Q5VSD8 79 aa8.47□□□□□ -1.05
TPBG-203ENST00000543496 RYR2Q92736 4967 aa8.46□□□□□ -1.06
TPBG-203ENST00000543496 LPAP08519 4548 aa8.44□□□□□ -1.06
TPBG-203ENST00000543496 KMT2CQ8NEZ4 4911 aaKnown RBP8.41□□□□□ -1.06
TPBG-203ENST00000543496 LUZP6Q538Z0 58 aa8.4□□□□□ -1.06
TPBG-203ENST00000543496 M0QZ58 72 aa8.38□□□□□ -1.07
TPBG-203ENST00000543496 LRP2P98164 4655 aa8.32□□□□□ -1.08
TPBG-203ENST00000543496 KRTAP17-1Q9BYP8 105 aa8.28□□□□□ -1.08
TPBG-203ENST00000543496 MT1HL1P0DM35 61 aa8.25□□□□□ -1.09
TPBG-203ENST00000543496 RYR1P21817 5038 aa8.21□□□□□ -1.1
TPBG-203ENST00000543496 R4GN34 69 aa8.2□□□□□ -1.1
TPBG-203ENST00000543496 PLAC4Q8WY50 150 aa8.13□□□□□ -1.11
TPBG-203ENST00000543496 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
TPBG-203ENST00000543496 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
TPBG-203ENST00000543496 RYR3Q15413 4870 aa8.07□□□□□ -1.12
TPBG-203ENST00000543496 ABCA13Q86UQ4 5058 aa8□□□□□ -1.13
TPBG-203ENST00000543496 MUC17Q685J3 4493 aa7.86□□□□□ -1.15
TPBG-203ENST00000543496 CAMK2N1Q7Z7J9 78 aa7.85□□□□□ -1.15
TPBG-203ENST00000543496 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
TPBG-203ENST00000543496 KRTAP4-1Q9BYQ7 146 aa7.84□□□□□ -1.15
TPBG-203ENST00000543496 PP632Q6XCG6 107 aa7.77□□□□□ -1.17
TPBG-203ENST00000543496 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
TPBG-203ENST00000543496 EPPK1P58107 5090 aaKnown RBP7.75□□□□□ -1.17
TPBG-203ENST00000543496 KRTAP19-2Q3LHN2 52 aa7.65□□□□□ -1.18
TPBG-203ENST00000543496 MUC2Q02817 5179 aa7.57□□□□□ -1.2
TPBG-203ENST00000543496 TNP1P09430 55 aa7.54□□□□□ -1.2
TPBG-203ENST00000543496 J3QL48 77 aa7.53□□□□□ -1.2
TPBG-203ENST00000543496 FLGP20930 4061 aaPredicted RBP7.47□□□□□ -1.21
TPBG-203ENST00000543496 KRTAP23-1A1A580 65 aa7.36□□□□□ -1.23
TPBG-203ENST00000543496 HERC2O95714 4834 aa7.36□□□□□ -1.23
TPBG-203ENST00000543496 SPRR5A0A1B0GTR4 108 aa7.35□□□□□ -1.23
TPBG-203ENST00000543496 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
TPBG-203ENST00000543496 HERC1Q15751 4861 aa7.28□□□□□ -1.24
TPBG-203ENST00000543496 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
TPBG-203ENST00000543496 BIRC6Q9NR09 4857 aa7.23□□□□□ -1.25
TPBG-203ENST00000543496 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
TPBG-203ENST00000543496 LCE3AQ5TA76 89 aa7.14□□□□□ -1.27
TPBG-203ENST00000543496 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
TPBG-203ENST00000543496 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
TPBG-203ENST00000543496 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
TPBG-203ENST00000543496 M0R2T5 61 aa7.06□□□□□ -1.28
TPBG-203ENST00000543496 HMCN2Q8NDA2 5059 aa6.95□□□□□ -1.3
TPBG-203ENST00000543496 INE1O15225 51 aa6.94□□□□□ -1.3
TPBG-203ENST00000543496 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
TPBG-203ENST00000543496 MT1FP04733 61 aa6.9□□□□□ -1.3
TPBG-203ENST00000543496 MT1HP80294 61 aa6.88□□□□□ -1.31
TPBG-203ENST00000543496 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
TPBG-203ENST00000543496 MT2AP02795 61 aa6.87□□□□□ -1.31
TPBG-203ENST00000543496 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
TPBG-203ENST00000543496 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
TPBG-203ENST00000543496 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
TPBG-203ENST00000543496 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
TPBG-203ENST00000543496 KRTAP12-3P60328 96 aa6.76□□□□□ -1.33
TPBG-203ENST00000543496 MT1XP80297 61 aa6.75□□□□□ -1.33
TPBG-203ENST00000543496 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
TPBG-203ENST00000543496 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
TPBG-203ENST00000543496 MT1BP07438 61 aa6.71□□□□□ -1.33
TPBG-203ENST00000543496 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
TPBG-203ENST00000543496 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
TPBG-203ENST00000543496 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
TPBG-203ENST00000543496 LCE3CQ5T5A8 94 aa6.36□□□□□ -1.39
TPBG-203ENST00000543496 KMT2DO14686 5537 aa6.33□□□□□ -1.4
TPBG-203ENST00000543496 USH2AO75445 5202 aa6.24□□□□□ -1.41
TPBG-203ENST00000543496 KRTAP9-6A8MVA2 160 aa6.21□□□□□ -1.41
TPBG-203ENST00000543496 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
TPBG-203ENST00000543496 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
TPBG-203ENST00000543496 LCE2BO14633 110 aa6.19□□□□□ -1.42
TPBG-203ENST00000543496 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
TPBG-203ENST00000543496 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
TPBG-203ENST00000543496 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
TPBG-203ENST00000543496 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.45
TPBG-203ENST00000543496 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
TPBG-203ENST00000543496 LCE2AQ5TA79 106 aaPredicted RBP5.93□□□□□ -1.46
TPBG-203ENST00000543496 MT1LQ93083 61 aa5.85□□□□□ -1.47
TPBG-203ENST00000543496 MT1EP04732 61 aa5.8□□□□□ -1.48
TPBG-203ENST00000543496 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
TPBG-203ENST00000543496 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
TPBG-203ENST00000543496 KRTAP4-3Q9BYR4 195 aa5.63□□□□□ -1.51
TPBG-203ENST00000543496 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms