RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
TRIM59-208ENST00000543469 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
TRIM59-208ENST00000543469 RYR3Q15413 4870 aa3.92□□□□□ -1.78
TRIM59-208ENST00000543469 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
TRIM59-208ENST00000543469 LINC01554Q52M75 96 aa3.91□□□□□ -1.78
TRIM59-208ENST00000543469 HSPG2P98160 4391 aa3.91□□□□□ -1.78
TRIM59-208ENST00000543469 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
TRIM59-208ENST00000543469 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.78
TRIM59-208ENST00000543469 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.79
TRIM59-208ENST00000543469 A0A0D9SG42 100 aa3.88□□□□□ -1.79
TRIM59-208ENST00000543469 FAT1Q14517 4588 aa3.88□□□□□ -1.79
TRIM59-208ENST00000543469 PKHD1P08F94 4074 aa3.88□□□□□ -1.79
TRIM59-208ENST00000543469 SRRM2Q9UQ35 2752 aaKnown RBP3.88□□□□□ -1.79
TRIM59-208ENST00000543469 KIAA1109Q2LD37 5005 aa3.86□□□□□ -1.79
TRIM59-208ENST00000543469 HERC2O95714 4834 aa3.85□□□□□ -1.79
TRIM59-208ENST00000543469 KMT2CQ8NEZ4 4911 aaKnown RBP3.84□□□□□ -1.8
TRIM59-208ENST00000543469 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
TRIM59-208ENST00000543469 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
TRIM59-208ENST00000543469 A6NN06 94 aa3.79□□□□□ -1.8
TRIM59-208ENST00000543469 ROMO1P60602 79 aa3.76□□□□□ -1.81
TRIM59-208ENST00000543469 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
TRIM59-208ENST00000543469 KRTAP3-3Q9BYR6 98 aa3.75□□□□□ -1.81
TRIM59-208ENST00000543469 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
TRIM59-208ENST00000543469 P0C880 135 aa3.74□□□□□ -1.81
TRIM59-208ENST00000543469 HERC1Q15751 4861 aa3.74□□□□□ -1.81
TRIM59-208ENST00000543469 SVIPQ8NHG7 77 aa3.74□□□□□ -1.81
TRIM59-208ENST00000543469 MYCBP2O75592 4640 aa3.73□□□□□ -1.81
TRIM59-208ENST00000543469 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
TRIM59-208ENST00000543469 TNXBP22105 4242 aa3.71□□□□□ -1.82
TRIM59-208ENST00000543469 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
TRIM59-208ENST00000543469 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
TRIM59-208ENST00000543469 MT1HP80294 61 aa3.69□□□□□ -1.82
TRIM59-208ENST00000543469 A8MU10 97 aa3.68□□□□□ -1.82
TRIM59-208ENST00000543469 MUC17Q685J3 4493 aa3.67□□□□□ -1.82
TRIM59-208ENST00000543469 TNP1P09430 55 aa3.67□□□□□ -1.82
TRIM59-208ENST00000543469 KRTAP3-2Q9BYR7 98 aa3.66□□□□□ -1.82
TRIM59-208ENST00000543469 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
TRIM59-208ENST00000543469 LRP1Q07954 4544 aaKnown RBP3.64□□□□□ -1.83
TRIM59-208ENST00000543469 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
TRIM59-208ENST00000543469 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.83
TRIM59-208ENST00000543469 PCLOQ9Y6V0 5065 aa3.59□□□□□ -1.84
TRIM59-208ENST00000543469 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
TRIM59-208ENST00000543469 MT2AP02795 61 aa3.55□□□□□ -1.84
TRIM59-208ENST00000543469 LCE2CQ5TA81 110 aa3.55□□□□□ -1.84
TRIM59-208ENST00000543469 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
TRIM59-208ENST00000543469 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
TRIM59-208ENST00000543469 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
TRIM59-208ENST00000543469 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
TRIM59-208ENST00000543469 LORP23490 312 aaPredicted RBP3.48□□□□□ -1.85
TRIM59-208ENST00000543469 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
TRIM59-208ENST00000543469 MT1FP04733 61 aa3.46□□□□□ -1.86
TRIM59-208ENST00000543469 KRTAP19-8Q3LI54 63 aa3.45□□□□□ -1.86
TRIM59-208ENST00000543469 KRTAP9-8Q9BYQ0 159 aa3.43□□□□□ -1.86
TRIM59-208ENST00000543469 HMCN2Q8NDA2 5059 aa3.42□□□□□ -1.86
TRIM59-208ENST00000543469 LCE2AQ5TA79 106 aaPredicted RBP3.4□□□□□ -1.86
TRIM59-208ENST00000543469 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
TRIM59-208ENST00000543469 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
TRIM59-208ENST00000543469 LRP2P98164 4655 aa3.36□□□□□ -1.87
TRIM59-208ENST00000543469 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
TRIM59-208ENST00000543469 LCE2DQ5TA82 110 aaPredicted RBP3.35□□□□□ -1.87
TRIM59-208ENST00000543469 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
TRIM59-208ENST00000543469 FLGP20930 4061 aaPredicted RBP3.35□□□□□ -1.87
TRIM59-208ENST00000543469 KRTAP19-1Q8IUB9 90 aa3.35□□□□□ -1.87
TRIM59-208ENST00000543469 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
TRIM59-208ENST00000543469 H3BS24 57 aa3.32□□□□□ -1.88
TRIM59-208ENST00000543469 LPAP08519 4548 aa3.32□□□□□ -1.88
TRIM59-208ENST00000543469 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
TRIM59-208ENST00000543469 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
TRIM59-208ENST00000543469 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
TRIM59-208ENST00000543469 MT1BP07438 61 aa3.26□□□□□ -1.89
TRIM59-208ENST00000543469 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
TRIM59-208ENST00000543469 FAT4Q6V0I7 4981 aa3.18□□□□□ -1.9
TRIM59-208ENST00000543469 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
TRIM59-208ENST00000543469 LCE2BO14633 110 aa3.16□□□□□ -1.9
TRIM59-208ENST00000543469 MT1XP80297 61 aa3.16□□□□□ -1.9
TRIM59-208ENST00000543469 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
TRIM59-208ENST00000543469 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
TRIM59-208ENST00000543469 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
TRIM59-208ENST00000543469 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
TRIM59-208ENST00000543469 KRTAP15-1Q3LI76 137 aa3.11□□□□□ -1.91
TRIM59-208ENST00000543469 UBR4Q5T4S7 5183 aa3.06□□□□□ -1.92
TRIM59-208ENST00000543469 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
TRIM59-208ENST00000543469 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
TRIM59-208ENST00000543469 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
TRIM59-208ENST00000543469 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
TRIM59-208ENST00000543469 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
TRIM59-208ENST00000543469 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
TRIM59-208ENST00000543469 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
TRIM59-208ENST00000543469 MT1GP13640 62 aa2.9□□□□□ -1.94
TRIM59-208ENST00000543469 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
TRIM59-208ENST00000543469 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
TRIM59-208ENST00000543469 SPRR2EP22531 72 aa2.87□□□□□ -1.95
TRIM59-208ENST00000543469 SPRR2BP35325 72 aa2.87□□□□□ -1.95
TRIM59-208ENST00000543469 SPRR2AP35326 72 aa2.87□□□□□ -1.95
TRIM59-208ENST00000543469 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
TRIM59-208ENST00000543469 MT1EP04732 61 aa2.84□□□□□ -1.95
TRIM59-208ENST00000543469 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.96
TRIM59-208ENST00000543469 KRTAP4-8A0A0G2JLE6 195 aa2.81□□□□□ -1.96
TRIM59-208ENST00000543469 KRTAP4-8Q9BYQ9 185 aa2.81□□□□□ -1.96
TRIM59-208ENST00000543469 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms