RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
GNE-206ENST00000543356 C20orf166-AS1Q96NR2 134 aa5.1□□□□□ -1.59
GNE-206ENST00000543356 HERC2O95714 4834 aa5.1□□□□□ -1.59
GNE-206ENST00000543356 A8MUU9 505 aa5.1□□□□□ -1.59
GNE-206ENST00000543356 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
GNE-206ENST00000543356 ABCA13Q86UQ4 5058 aa5.04□□□□□ -1.6
GNE-206ENST00000543356 ROMO1P60602 79 aa5.04□□□□□ -1.6
GNE-206ENST00000543356 SPATA8Q6RVD6 105 aa5.03□□□□□ -1.6
GNE-206ENST00000543356 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
GNE-206ENST00000543356 XP32Q5T750 250 aa5.01□□□□□ -1.61
GNE-206ENST00000543356 DMBT1Q9UGM3 2413 aaPredicted RBP5□□□□□ -1.61
GNE-206ENST00000543356 RPL37P61927 97 aaKnown RBP5□□□□□ -1.61
GNE-206ENST00000543356 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
GNE-206ENST00000543356 P0C880 135 aa4.99□□□□□ -1.61
GNE-206ENST00000543356 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
GNE-206ENST00000543356 A0A1B0GU69 56 aa4.92□□□□□ -1.62
GNE-206ENST00000543356 KRTAP25-1Q3LHN0 102 aa4.92□□□□□ -1.62
GNE-206ENST00000543356 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
GNE-206ENST00000543356 UQCR11O14957 56 aa4.89□□□□□ -1.63
GNE-206ENST00000543356 ACYP2P14621 99 aa4.87□□□□□ -1.63
GNE-206ENST00000543356 PCLOQ9Y6V0 5065 aa4.84□□□□□ -1.63
GNE-206ENST00000543356 LPAP08519 4548 aa4.83□□□□□ -1.64
GNE-206ENST00000543356 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
GNE-206ENST00000543356 COX6B2Q6YFQ2 88 aa4.81□□□□□ -1.64
GNE-206ENST00000543356 LRP2P98164 4655 aa4.8□□□□□ -1.64
GNE-206ENST00000543356 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
GNE-206ENST00000543356 CRIPTQ9P021 101 aa4.8□□□□□ -1.64
GNE-206ENST00000543356 LCE2BO14633 110 aa4.77□□□□□ -1.65
GNE-206ENST00000543356 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
GNE-206ENST00000543356 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
GNE-206ENST00000543356 K7ERS5 55 aa4.76□□□□□ -1.65
GNE-206ENST00000543356 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
GNE-206ENST00000543356 HERC1Q15751 4861 aa4.71□□□□□ -1.66
GNE-206ENST00000543356 H0YAA0 97 aa4.7□□□□□ -1.66
GNE-206ENST00000543356 KRTAP4-1Q9BYQ7 146 aa4.7□□□□□ -1.66
GNE-206ENST00000543356 H1FX-AS1Q4G0G2 97 aa4.68□□□□□ -1.66
GNE-206ENST00000543356 S4R3F8 94 aa4.66□□□□□ -1.66
GNE-206ENST00000543356 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.66
GNE-206ENST00000543356 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.67
GNE-206ENST00000543356 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
GNE-206ENST00000543356 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
GNE-206ENST00000543356 CAMK2N1Q7Z7J9 78 aa4.58□□□□□ -1.68
GNE-206ENST00000543356 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
GNE-206ENST00000543356 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
GNE-206ENST00000543356 A0A1B0GU33 70 aa4.52□□□□□ -1.69
GNE-206ENST00000543356 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
GNE-206ENST00000543356 MUC2Q02817 5179 aa4.47□□□□□ -1.69
GNE-206ENST00000543356 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
GNE-206ENST00000543356 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
GNE-206ENST00000543356 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
GNE-206ENST00000543356 UBR4Q5T4S7 5183 aa4.46□□□□□ -1.7
GNE-206ENST00000543356 MT1HP80294 61 aa4.38□□□□□ -1.71
GNE-206ENST00000543356 LORP23490 312 aaPredicted RBP4.35□□□□□ -1.71
GNE-206ENST00000543356 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
GNE-206ENST00000543356 M0QZ58 72 aa4.33□□□□□ -1.72
GNE-206ENST00000543356 A0A0D9SG42 100 aa4.31□□□□□ -1.72
GNE-206ENST00000543356 M0R2T5 61 aa4.31□□□□□ -1.72
GNE-206ENST00000543356 FAT4Q6V0I7 4981 aa4.3□□□□□ -1.72
GNE-206ENST00000543356 R4GN34 69 aa4.28□□□□□ -1.72
GNE-206ENST00000543356 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
GNE-206ENST00000543356 MT2AP02795 61 aa4.21□□□□□ -1.73
GNE-206ENST00000543356 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
GNE-206ENST00000543356 MT1FP04733 61 aa4.18□□□□□ -1.74
GNE-206ENST00000543356 KRTAP12-2P59991 146 aa4.18□□□□□ -1.74
GNE-206ENST00000543356 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
GNE-206ENST00000543356 KRTAP10-10P60014 251 aa4.16□□□□□ -1.74
GNE-206ENST00000543356 KRTAP19-1Q8IUB9 90 aa4.13□□□□□ -1.75
GNE-206ENST00000543356 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
GNE-206ENST00000543356 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
GNE-206ENST00000543356 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
GNE-206ENST00000543356 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
GNE-206ENST00000543356 MT1BP07438 61 aa3.98□□□□□ -1.77
GNE-206ENST00000543356 MT1XP80297 61 aa3.86□□□□□ -1.79
GNE-206ENST00000543356 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
GNE-206ENST00000543356 TNP1P09430 55 aa3.84□□□□□ -1.8
GNE-206ENST00000543356 INE1O15225 51 aa3.79□□□□□ -1.8
GNE-206ENST00000543356 USH2AO75445 5202 aa3.79□□□□□ -1.8
GNE-206ENST00000543356 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
GNE-206ENST00000543356 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
GNE-206ENST00000543356 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
GNE-206ENST00000543356 KRTAP19-6Q3LI70 58 aa3.71□□□□□ -1.82
GNE-206ENST00000543356 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
GNE-206ENST00000543356 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
GNE-206ENST00000543356 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
GNE-206ENST00000543356 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
GNE-206ENST00000543356 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
GNE-206ENST00000543356 CRCT1Q9UGL9 99 aa3.61□□□□□ -1.83
GNE-206ENST00000543356 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
GNE-206ENST00000543356 LOC100996750A0A140TA64 210 aa3.57□□□□□ -1.84
GNE-206ENST00000543356 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
GNE-206ENST00000543356 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
GNE-206ENST00000543356 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
GNE-206ENST00000543356 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
GNE-206ENST00000543356 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
GNE-206ENST00000543356 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
GNE-206ENST00000543356 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
GNE-206ENST00000543356 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
GNE-206ENST00000543356 KMT2DO14686 5537 aa3.44□□□□□ -1.86
GNE-206ENST00000543356 MT1EP04732 61 aa3.38□□□□□ -1.87
GNE-206ENST00000543356 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms