RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 CRIPTQ9P021 101 aa8.52□□□□□ -1.05
CACNA1C-230ENST00000543114 IMUPQ9GZP8 106 aa8.51□□□□□ -1.05
CACNA1C-230ENST00000543114 TRAV22A0A0B4J277 110 aa8.48□□□□□ -1.05
CACNA1C-230ENST00000543114 LOC101927531A0A1B0GV80 90 aa8.45□□□□□ -1.06
CACNA1C-230ENST00000543114 ETDBQ3ZM63 59 aa8.42□□□□□ -1.06
CACNA1C-230ENST00000543114 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.06
CACNA1C-230ENST00000543114 KRTAP4-6Q9BYQ5 205 aa8.4□□□□□ -1.06
CACNA1C-230ENST00000543114 H0YAA0 97 aa8.39□□□□□ -1.07
CACNA1C-230ENST00000543114 GTF2H5Q6ZYL4 71 aa8.38□□□□□ -1.07
CACNA1C-230ENST00000543114 F8W1H4 67 aa8.37□□□□□ -1.07
CACNA1C-230ENST00000543114 NDUFC1O43677 76 aa8.35□□□□□ -1.07
CACNA1C-230ENST00000543114 H0Y9P7 68 aa8.3□□□□□ -1.08
CACNA1C-230ENST00000543114 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
CACNA1C-230ENST00000543114 A8MUN3 132 aa8.28□□□□□ -1.08
CACNA1C-230ENST00000543114 UQCRQO14949 82 aa8.28□□□□□ -1.08
CACNA1C-230ENST00000543114 MT1XP80297 61 aa8.28□□□□□ -1.08
CACNA1C-230ENST00000543114 SPRR2FQ96RM1 72 aa8.28□□□□□ -1.08
CACNA1C-230ENST00000543114 ATOX1O00244 68 aa8.27□□□□□ -1.09
CACNA1C-230ENST00000543114 KRTAP2-3P0C7H8 128 aa8.25□□□□□ -1.09
CACNA1C-230ENST00000543114 KRTAP2-4Q9BYR9 128 aa8.25□□□□□ -1.09
CACNA1C-230ENST00000543114 PRO2289Q9P1D8 64 aa8.25□□□□□ -1.09
CACNA1C-230ENST00000543114 HIST1H4AP62805 103 aaKnown RBP8.24□□□□□ -1.09
CACNA1C-230ENST00000543114 ATP5EP2Q5VTU8 51 aa8.24□□□□□ -1.09
CACNA1C-230ENST00000543114 ACYP1P07311 99 aa8.23□□□□□ -1.09
CACNA1C-230ENST00000543114 SPRR2EP22531 72 aa8.23□□□□□ -1.09
CACNA1C-230ENST00000543114 SPRR2BP35325 72 aa8.23□□□□□ -1.09
CACNA1C-230ENST00000543114 SPRR2AP35326 72 aa8.23□□□□□ -1.09
CACNA1C-230ENST00000543114 FAM240AA0A1B0GVK7 77 aa8.18□□□□□ -1.1
CACNA1C-230ENST00000543114 KRTAP8-1Q8IUC2 63 aa8.15□□□□□ -1.1
CACNA1C-230ENST00000543114 PLAC4Q8WY50 150 aa8.15□□□□□ -1.1
CACNA1C-230ENST00000543114 LINC00208Q96KT6 92 aa8.13□□□□□ -1.11
CACNA1C-230ENST00000543114 PCP4L1A6NKN8 68 aa8.11□□□□□ -1.11
CACNA1C-230ENST00000543114 P0C880 135 aa8.1□□□□□ -1.11
CACNA1C-230ENST00000543114 KRTAP12-2P59991 146 aa8.1□□□□□ -1.11
CACNA1C-230ENST00000543114 R4GN34 69 aa8.09□□□□□ -1.11
CACNA1C-230ENST00000543114 LCE1AQ5T7P2 110 aa8.08□□□□□ -1.12
CACNA1C-230ENST00000543114 M0QZ58 72 aa8.04□□□□□ -1.12
CACNA1C-230ENST00000543114 OCR1Q9BZK8 76 aa8.03□□□□□ -1.12
CACNA1C-230ENST00000543114 MP68P56378 58 aa8.02□□□□□ -1.13
CACNA1C-230ENST00000543114 KRTAP4-8A0A0G2JLE6 195 aa8.01□□□□□ -1.13
CACNA1C-230ENST00000543114 LINC00643Q86TS7 51 aa8.01□□□□□ -1.13
CACNA1C-230ENST00000543114 C20orf197Q8N268 126 aa8.01□□□□□ -1.13
CACNA1C-230ENST00000543114 KRTAP4-8Q9BYQ9 185 aa8.01□□□□□ -1.13
CACNA1C-230ENST00000543114 KRTAP2-2Q9BYT5 123 aa7.97□□□□□ -1.13
CACNA1C-230ENST00000543114 KRTAP2-1Q9BYU5 128 aa7.97□□□□□ -1.13
CACNA1C-230ENST00000543114 SPRR2DP22532 72 aa7.95□□□□□ -1.14
CACNA1C-230ENST00000543114 LINC01554Q52M75 96 aa7.94□□□□□ -1.14
CACNA1C-230ENST00000543114 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
CACNA1C-230ENST00000543114 KRTAP10-7P60409 375 aaPredicted RBP7.9□□□□□ -1.14
CACNA1C-230ENST00000543114 H3BPC8 53 aa7.86□□□□□ -1.15
CACNA1C-230ENST00000543114 KRTAP10-12P60413 245 aa7.83□□□□□ -1.16
CACNA1C-230ENST00000543114 LCE3BQ5TA77 95 aa7.75□□□□□ -1.17
CACNA1C-230ENST00000543114 TRAV7A0A075B6U4 112 aa7.73□□□□□ -1.17
CACNA1C-230ENST00000543114 MT-ATP8P03928 68 aa7.7□□□□□ -1.18
CACNA1C-230ENST00000543114 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
CACNA1C-230ENST00000543114 A0A1B0GV90 55 aa7.65□□□□□ -1.18
CACNA1C-230ENST00000543114 ACYP2P14621 99 aa7.64□□□□□ -1.19
CACNA1C-230ENST00000543114 SPTSSBQ8NFR3 76 aa7.59□□□□□ -1.19
CACNA1C-230ENST00000543114 J3QR89 54 aa7.56□□□□□ -1.2
CACNA1C-230ENST00000543114 DSTQ03001 7570 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-230ENST00000543114 CHKB-CPT1BH3BT56 60 aa7.51□□□□□ -1.21
CACNA1C-230ENST00000543114 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
CACNA1C-230ENST00000543114 GPR98Q8WXG9 6306 aa7.47□□□□□ -1.21
CACNA1C-230ENST00000543114 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
CACNA1C-230ENST00000543114 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
CACNA1C-230ENST00000543114 SMIM20Q8N5G0 67 aa7.4□□□□□ -1.22
CACNA1C-230ENST00000543114 LCE5AQ5TCM9 118 aa7.39□□□□□ -1.23
CACNA1C-230ENST00000543114 SNURFQ9Y675 71 aa7.37□□□□□ -1.23
CACNA1C-230ENST00000543114 MT1EP04732 61 aa7.35□□□□□ -1.23
CACNA1C-230ENST00000543114 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
CACNA1C-230ENST00000543114 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
CACNA1C-230ENST00000543114 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
CACNA1C-230ENST00000543114 A0A0D9SG42 100 aa7.18□□□□□ -1.26
CACNA1C-230ENST00000543114 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
CACNA1C-230ENST00000543114 K7ERU9 68 aa7.15□□□□□ -1.26
CACNA1C-230ENST00000543114 KRTAP4-12Q9BQ66 201 aa7.15□□□□□ -1.26
CACNA1C-230ENST00000543114 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
CACNA1C-230ENST00000543114 COA5Q86WW8 74 aa7.13□□□□□ -1.27
CACNA1C-230ENST00000543114 LCE1DQ5T752 114 aa7.11□□□□□ -1.27
CACNA1C-230ENST00000543114 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
CACNA1C-230ENST00000543114 MT1GP13640 62 aa7.09□□□□□ -1.27
CACNA1C-230ENST00000543114 SERP2Q8N6R1 65 aa7.09□□□□□ -1.27
CACNA1C-230ENST00000543114 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
CACNA1C-230ENST00000543114 KRTAP9-9Q9BYP9 154 aa7.08□□□□□ -1.28
CACNA1C-230ENST00000543114 KRTAP9-4Q9BYQ2 154 aa7.08□□□□□ -1.28
CACNA1C-230ENST00000543114 HMCN1Q96RW7 5635 aa7.06□□□□□ -1.28
CACNA1C-230ENST00000543114 SEC61GP60059 68 aa7.05□□□□□ -1.28
CACNA1C-230ENST00000543114 SERP1Q9Y6X1 66 aa7.05□□□□□ -1.28
CACNA1C-230ENST00000543114 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
CACNA1C-230ENST00000543114 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
CACNA1C-230ENST00000543114 MT1MQ8N339 61 aa7.02□□□□□ -1.29
CACNA1C-230ENST00000543114 A0A1B0GU33 70 aa6.99□□□□□ -1.29
CACNA1C-230ENST00000543114 MT4P47944 62 aa6.99□□□□□ -1.29
CACNA1C-230ENST00000543114 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
CACNA1C-230ENST00000543114 MT1LQ93083 61 aa6.98□□□□□ -1.29
CACNA1C-230ENST00000543114 AHNAK2Q8IVF2 5795 aa6.93□□□□□ -1.3
CACNA1C-230ENST00000543114 KRTAP4-3Q9BYR4 195 aa6.88□□□□□ -1.31
CACNA1C-230ENST00000543114 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
CACNA1C-230ENST00000543114 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
CACNA1C-230ENST00000543114 KRTAP5-4Q6L8H1 288 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms