RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 NBEAQ8NFP9 2946 aa0.49□□□□□ -2.33
GTF2H3-210ENST00000543005 DNAH11Q96DT5 4516 aa0.49□□□□□ -2.33
GTF2H3-210ENST00000543005 TEX15Q9BXT5 2789 aa0.49□□□□□ -2.33
GTF2H3-210ENST00000543005 C5orf42Q9H799 3197 aa0.49□□□□□ -2.33
GTF2H3-210ENST00000543005 DNAH12Q6ZR08 3092 aa0.49□□□□□ -2.33
GTF2H3-210ENST00000543005 TLN1Q9Y490 2541 aaKnown RBP0.48□□□□□ -2.33
GTF2H3-210ENST00000543005 ITPR1Q14643 2758 aa0.48□□□□□ -2.33
GTF2H3-210ENST00000543005 TLN2Q9Y4G6 2542 aa0.48□□□□□ -2.33
GTF2H3-210ENST00000543005 DCHS1Q96JQ0 3298 aa0.47□□□□□ -2.33
GTF2H3-210ENST00000543005 ACACBO00763 2458 aa0.47□□□□□ -2.33
GTF2H3-210ENST00000543005 ASPMQ8IZT6 3477 aa0.47□□□□□ -2.33
GTF2H3-210ENST00000543005 DEFB131AP59861 70 aa0.47□□□□□ -2.33
GTF2H3-210ENST00000543005 DNAH3Q8TD57 4116 aa0.47□□□□□ -2.33
GTF2H3-210ENST00000543005 HMCN2Q8NDA2 5059 aa0.47□□□□□ -2.33
GTF2H3-210ENST00000543005 EP400Q96L91 3159 aa0.47□□□□□ -2.33
GTF2H3-210ENST00000543005 CRYBG3Q68DQ2 2970 aa0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 DUOX1Q9NRD9 1551 aa0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 NF1P21359 2839 aa0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 SRRM2Q9UQ35 2752 aaKnown RBP0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 HECTD4Q9Y4D8 3996 aa0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 RIF1Q5UIP0 2472 aaKnown RBP0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 BRCA2P51587 3418 aa0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 COL7A1Q02388 2944 aa0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 HERC2O95714 4834 aa0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 CFAP54Q96N23 3096 aa0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 APC2O95996 2303 aa0.46□□□□□ -2.34
GTF2H3-210ENST00000543005 PKHD1L1Q86WI1 4243 aa0.45□□□□□ -2.34
GTF2H3-210ENST00000543005 HSPG2P98160 4391 aa0.45□□□□□ -2.34
GTF2H3-210ENST00000543005 SPTAN1Q13813 2472 aaKnown RBP0.45□□□□□ -2.34
GTF2H3-210ENST00000543005 LRBAP50851 2863 aa0.44□□□□□ -2.34
GTF2H3-210ENST00000543005 NIPBLQ6KC79 2804 aaeCLIP0.44□□□□□ -2.34
GTF2H3-210ENST00000543005 DNAH2Q9P225 4427 aa0.44□□□□□ -2.34
GTF2H3-210ENST00000543005 PKHD1P08F94 4074 aa0.44□□□□□ -2.34
GTF2H3-210ENST00000543005 ZZEF1O43149 2961 aa0.44□□□□□ -2.34
GTF2H3-210ENST00000543005 MTORP42345 2549 aa0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 C9orf92A6NGG3 77 aa0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 H3BNG1 76 aa0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 M0QY20 66 aa0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 SPRR2BP35325 72 aa0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 KRTAP20-1Q3LI63 56 aa0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 MGAM2Q2M2H8 2515 aa0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 MROH2BQ7Z745 1585 aa0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 LRP1BQ9NZR2 4599 aa0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 DMBT1Q9UGM3 2413 aaPredicted RBP0.43□□□□□ -2.34
GTF2H3-210ENST00000543005 DNAH9Q9NYC9 4486 aa0.42□□□□□ -2.34
GTF2H3-210ENST00000543005 ANK3Q12955 4377 aaKnown RBP0.42□□□□□ -2.34
GTF2H3-210ENST00000543005 UTRNP46939 3433 aa0.42□□□□□ -2.34
GTF2H3-210ENST00000543005 NBPF19A0A087WUL8 3843 aa0.42□□□□□ -2.34
GTF2H3-210ENST00000543005 DMXL2Q8TDJ6 3036 aa0.42□□□□□ -2.34
GTF2H3-210ENST00000543005 CEP250Q9BV73 2442 aa0.42□□□□□ -2.34
GTF2H3-210ENST00000543005 USP34Q70CQ2 3546 aa0.41□□□□□ -2.34
GTF2H3-210ENST00000543005 USH2AO75445 5202 aa0.41□□□□□ -2.34
GTF2H3-210ENST00000543005 MAP1AP78559 2803 aaPredicted RBP0.41□□□□□ -2.34
GTF2H3-210ENST00000543005 DCHS2Q6V1P9 2916 aa0.41□□□□□ -2.34
GTF2H3-210ENST00000543005 WDR87Q6ZQQ6 2873 aa0.4□□□□□ -2.34
GTF2H3-210ENST00000543005 FREM2Q5SZK8 3169 aa0.4□□□□□ -2.35
GTF2H3-210ENST00000543005 MYO15AQ9UKN7 3530 aa0.4□□□□□ -2.35
GTF2H3-210ENST00000543005 GOLGB1Q14789 3259 aaKnown RBP0.4□□□□□ -2.35
GTF2H3-210ENST00000543005 HTTP42858 3142 aa0.4□□□□□ -2.35
GTF2H3-210ENST00000543005 SMG1Q96Q15 3661 aaKnown RBP0.4□□□□□ -2.35
GTF2H3-210ENST00000543005 VPS13AQ96RL7 3174 aa0.4□□□□□ -2.35
GTF2H3-210ENST00000543005 DMXL1Q9Y485 3027 aa0.4□□□□□ -2.35
GTF2H3-210ENST00000543005 APOBP04114 4563 aaKnown RBP0.4□□□□□ -2.35
GTF2H3-210ENST00000543005 LAMA5O15230 3695 aa0.4□□□□□ -2.35
GTF2H3-210ENST00000543005 WDFY3Q8IZQ1 3526 aa0.39□□□□□ -2.35
GTF2H3-210ENST00000543005 TACC2O95359 2948 aa0.39□□□□□ -2.35
GTF2H3-210ENST00000543005 CUBNO60494 3623 aa0.39□□□□□ -2.35
GTF2H3-210ENST00000543005 SNRPGP62308 76 aaKnown RBP0.39□□□□□ -2.35
GTF2H3-210ENST00000543005 CENPEQ02224 2701 aa0.39□□□□□ -2.35
GTF2H3-210ENST00000543005 CDH23Q9H251 3354 aa0.39□□□□□ -2.35
GTF2H3-210ENST00000543005 LOC400499M0QZD8 3231 aa0.38□□□□□ -2.35
GTF2H3-210ENST00000543005 FLGP20930 4061 aaPredicted RBP0.38□□□□□ -2.35
GTF2H3-210ENST00000543005 GCC2Q8IWJ2 1684 aa0.38□□□□□ -2.35
GTF2H3-210ENST00000543005 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
GTF2H3-210ENST00000543005 DYNC2H1Q8NCM8 4307 aaKnown RBP0.37□□□□□ -2.35
GTF2H3-210ENST00000543005 SVEP1Q4LDE5 3571 aa0.37□□□□□ -2.35
GTF2H3-210ENST00000543005 A8MTW9 85 aa0.37□□□□□ -2.35
GTF2H3-210ENST00000543005 DNAH14Q0VDD8 3507 aa0.37□□□□□ -2.35
GTF2H3-210ENST00000543005 LAMA1P25391 3075 aa0.36□□□□□ -2.35
GTF2H3-210ENST00000543005 DNAH6Q9C0G6 4158 aa0.36□□□□□ -2.35
GTF2H3-210ENST00000543005 MUC12Q9UKN1 5478 aa0.36□□□□□ -2.35
GTF2H3-210ENST00000543005 KRTAP6-2Q3LI66 62 aa0.36□□□□□ -2.35
GTF2H3-210ENST00000543005 CSMD2Q7Z408 3487 aa0.36□□□□□ -2.35
GTF2H3-210ENST00000543005 VPS13DQ5THJ4 4388 aa0.36□□□□□ -2.35
GTF2H3-210ENST00000543005 FAT3Q8TDW7 4589 aa0.36□□□□□ -2.35
GTF2H3-210ENST00000543005 XIRP2A4UGR9 3374 aa0.36□□□□□ -2.35
GTF2H3-210ENST00000543005 FRYLO94915 3013 aa0.35□□□□□ -2.35
GTF2H3-210ENST00000543005 CLPSL2Q6UWE3 100 aa0.35□□□□□ -2.35
GTF2H3-210ENST00000543005 FRYQ5TBA9 3013 aa0.35□□□□□ -2.35
GTF2H3-210ENST00000543005 MGAQ8IWI9 3026 aa0.35□□□□□ -2.35
GTF2H3-210ENST00000543005 DNAH7Q8WXX0 4024 aa0.34□□□□□ -2.35
GTF2H3-210ENST00000543005 AKAP9Q99996 3911 aa0.34□□□□□ -2.35
GTF2H3-210ENST00000543005 M0QZ58 72 aa0.34□□□□□ -2.36
GTF2H3-210ENST00000543005 POLR2KP53803 58 aaKnown RBP0.34□□□□□ -2.36
GTF2H3-210ENST00000543005 FAM186AA6NE01 2351 aa0.33□□□□□ -2.36
GTF2H3-210ENST00000543005 TNP1P09430 55 aa0.33□□□□□ -2.36
GTF2H3-210ENST00000543005 DEFB110Q30KQ9 67 aa0.32□□□□□ -2.36
GTF2H3-210ENST00000543005 VPS13CQ709C8 3753 aa0.32□□□□□ -2.36
GTF2H3-210ENST00000543005 LRP2P98164 4655 aa0.31□□□□□ -2.36
GTF2H3-210ENST00000543005 ACACAQ13085 2346 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms