RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	KRTAP10-10	P60014	251 aa		6.13	□□□□□ -1.43
ABCB8-222	ENST00000542328	TNP1	P09430	55 aa		6.11	□□□□□ -1.43
ABCB8-222	ENST00000542328	FAT1	Q14517	4588 aa		6.11	□□□□□ -1.43
ABCB8-222	ENST00000542328	KIAA1109	Q2LD37	5005 aa		6.08	□□□□□ -1.44
ABCB8-222	ENST00000542328	FAT2	Q9NYQ8	4349 aa		6.08	□□□□□ -1.44
ABCB8-222	ENST00000542328	KMT2A	Q03164	3969 aa		6.08	□□□□□ -1.44
ABCB8-222	ENST00000542328	SACS	Q9NZJ4	4579 aa		6.07	□□□□□ -1.44
ABCB8-222	ENST00000542328	RYR2	Q92736	4967 aa		6.07	□□□□□ -1.44
ABCB8-222	ENST00000542328	DNAH6	Q9C0G6	4158 aa		6.07	□□□□□ -1.44
ABCB8-222	ENST00000542328	C10orf95	Q9H7T3	257 aa		6.06	□□□□□ -1.44
ABCB8-222	ENST00000542328	KRTAP3-1	Q9BYR8	98 aa		6.06	□□□□□ -1.44
ABCB8-222	ENST00000542328	RYR1	P21817	5038 aa		6.04	□□□□□ -1.44
ABCB8-222	ENST00000542328	RYR3	Q15413	4870 aa		6.03	□□□□□ -1.44
ABCB8-222	ENST00000542328	DNAH7	Q8WXX0	4024 aa		6.01	□□□□□ -1.45
ABCB8-222	ENST00000542328		A0A0A0MQY5	61 aa		6	□□□□□ -1.45
ABCB8-222	ENST00000542328	KRTAP17-1	Q9BYP8	105 aa		5.94	□□□□□ -1.46
ABCB8-222	ENST00000542328	PP632	Q6XCG6	107 aa		5.92	□□□□□ -1.46
ABCB8-222	ENST00000542328	NDUFAF8	A1L188	74 aa		5.9	□□□□□ -1.46
ABCB8-222	ENST00000542328	DNAH8	Q96JB1	4490 aa		5.9	□□□□□ -1.46
ABCB8-222	ENST00000542328	HYDIN	Q4G0P3	5121 aa		5.9	□□□□□ -1.47
ABCB8-222	ENST00000542328	BIRC6	Q9NR09	4857 aa		5.89	□□□□□ -1.47
ABCB8-222	ENST00000542328	APOB	P04114	4563 aa	Known RBP	5.87	□□□□□ -1.47
ABCB8-222	ENST00000542328	KRTAP12-2	P59991	146 aa		5.87	□□□□□ -1.47
ABCB8-222	ENST00000542328	LYST	Q99698	3801 aa		5.83	□□□□□ -1.48
ABCB8-222	ENST00000542328	PRO2289	Q9P1D8	64 aa		5.81	□□□□□ -1.48
ABCB8-222	ENST00000542328	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.81	□□□□□ -1.48
ABCB8-222	ENST00000542328	KRTAP10-6	P60371	365 aa	Predicted RBP	5.81	□□□□□ -1.48
ABCB8-222	ENST00000542328	KRTAP12-1	P59990	96 aa		5.81	□□□□□ -1.48
ABCB8-222	ENST00000542328	VPS13B	Q7Z7G8	4022 aa		5.79	□□□□□ -1.48
ABCB8-222	ENST00000542328	KRTAP13-4	Q3LI77	160 aa		5.78	□□□□□ -1.48
ABCB8-222	ENST00000542328	HECTD4	Q9Y4D8	3996 aa		5.76	□□□□□ -1.49
ABCB8-222	ENST00000542328	HERC2	O95714	4834 aa		5.76	□□□□□ -1.49
ABCB8-222	ENST00000542328	KRTAP3-3	Q9BYR6	98 aa		5.74	□□□□□ -1.49
ABCB8-222	ENST00000542328	KRTAP4-1	Q9BYQ7	146 aa		5.73	□□□□□ -1.49
ABCB8-222	ENST00000542328	LRP1	Q07954	4544 aa	Known RBP	5.69	□□□□□ -1.5
ABCB8-222	ENST00000542328	HSPG2	P98160	4391 aa		5.69	□□□□□ -1.5
ABCB8-222	ENST00000542328	PKHD1	P08F94	4074 aa		5.68	□□□□□ -1.5
ABCB8-222	ENST00000542328	PKD1	P98161	4303 aa		5.67	□□□□□ -1.5
ABCB8-222	ENST00000542328	KRTAP3-2	Q9BYR7	98 aa		5.66	□□□□□ -1.5
ABCB8-222	ENST00000542328	EPPK1	P58107	5090 aa	Known RBP	5.58	□□□□□ -1.52
ABCB8-222	ENST00000542328	MYCBP2	O75592	4640 aa		5.57	□□□□□ -1.52
ABCB8-222	ENST00000542328	MT1H	P80294	61 aa		5.55	□□□□□ -1.52
ABCB8-222	ENST00000542328	FAT3	Q8TDW7	4589 aa		5.55	□□□□□ -1.52
ABCB8-222	ENST00000542328	FRAS1	Q86XX4	4008 aa		5.5	□□□□□ -1.53
ABCB8-222	ENST00000542328	ABCA13	Q86UQ4	5058 aa		5.43	□□□□□ -1.54
ABCB8-222	ENST00000542328	HERC1	Q15751	4861 aa		5.43	□□□□□ -1.54
ABCB8-222	ENST00000542328	LOR	P23490	312 aa	Predicted RBP	5.41	□□□□□ -1.54
ABCB8-222	ENST00000542328	MT2A	P02795	61 aa		5.39	□□□□□ -1.55
ABCB8-222	ENST00000542328	LRP2	P98164	4655 aa		5.37	□□□□□ -1.55
ABCB8-222	ENST00000542328	PCLO	Q9Y6V0	5065 aa		5.32	□□□□□ -1.56
ABCB8-222	ENST00000542328	PKHD1L1	Q86WI1	4243 aa		5.3	□□□□□ -1.56
ABCB8-222	ENST00000542328	MT1F	P04733	61 aa		5.3	□□□□□ -1.56
ABCB8-222	ENST00000542328	KRTAP15-1	Q3LI76	137 aa		5.28	□□□□□ -1.56
ABCB8-222	ENST00000542328	TNXB	P22105	4242 aa		5.25	□□□□□ -1.57
ABCB8-222	ENST00000542328	SPRR2G	Q9BYE4	73 aa		5.25	□□□□□ -1.57
ABCB8-222	ENST00000542328	KRTAP10-12	P60413	245 aa		5.23	□□□□□ -1.57
ABCB8-222	ENST00000542328	LCE2C	Q5TA81	110 aa		5.23	□□□□□ -1.57
ABCB8-222	ENST00000542328	LPA	P08519	4548 aa		5.17	□□□□□ -1.58
ABCB8-222	ENST00000542328	KRTAP19-2	Q3LHN2	52 aa		5.13	□□□□□ -1.59
ABCB8-222	ENST00000542328	KRTAP9-8	Q9BYQ0	159 aa		5.1	□□□□□ -1.59
ABCB8-222	ENST00000542328	KRTAP12-3	P60328	96 aa		5.1	□□□□□ -1.59
ABCB8-222	ENST00000542328	LCE3A	Q5TA76	89 aa		5.1	□□□□□ -1.59
ABCB8-222	ENST00000542328	KRTAP19-1	Q8IUB9	90 aa		5.07	□□□□□ -1.6
ABCB8-222	ENST00000542328	KRTAP23-1	A1A580	65 aa		5.06	□□□□□ -1.6
ABCB8-222	ENST00000542328	KRTAP19-8	Q3LI54	63 aa		5.04	□□□□□ -1.6
ABCB8-222	ENST00000542328	HMCN2	Q8NDA2	5059 aa		5.02	□□□□□ -1.61
ABCB8-222	ENST00000542328	RNF213	Q63HN8	5207 aa		5.01	□□□□□ -1.61
ABCB8-222	ENST00000542328	KRTAP8-1	Q8IUC2	63 aa		4.99	□□□□□ -1.61
ABCB8-222	ENST00000542328	KRTAP9-3	Q9BYQ3	159 aa		4.96	□□□□□ -1.61
ABCB8-222	ENST00000542328	MUC17	Q685J3	4493 aa		4.94	□□□□□ -1.62
ABCB8-222	ENST00000542328	CRCT1	Q9UGL9	99 aa		4.93	□□□□□ -1.62
ABCB8-222	ENST00000542328	LCE2A	Q5TA79	106 aa	Predicted RBP	4.9	□□□□□ -1.62
ABCB8-222	ENST00000542328	MT1B	P07438	61 aa		4.9	□□□□□ -1.63
ABCB8-222	ENST00000542328	FAT4	Q6V0I7	4981 aa		4.9	□□□□□ -1.63
ABCB8-222	ENST00000542328	FLG	P20930	4061 aa	Predicted RBP	4.89	□□□□□ -1.63
ABCB8-222	ENST00000542328	UBR4	Q5T4S7	5183 aa		4.86	□□□□□ -1.63
ABCB8-222	ENST00000542328	KRTAP10-5	P60370	271 aa		4.85	□□□□□ -1.63
ABCB8-222	ENST00000542328	LCE2B	O14633	110 aa		4.79	□□□□□ -1.64
ABCB8-222	ENST00000542328	MT1X	P80297	61 aa		4.79	□□□□□ -1.64
ABCB8-222	ENST00000542328	SPRR2F	Q96RM1	72 aa		4.74	□□□□□ -1.65
ABCB8-222	ENST00000542328	KRTAP10-7	P60409	375 aa	Predicted RBP	4.71	□□□□□ -1.66
ABCB8-222	ENST00000542328	INE1	O15225	51 aa		4.71	□□□□□ -1.66
ABCB8-222	ENST00000542328	LCE2D	Q5TA82	110 aa	Predicted RBP	4.7	□□□□□ -1.66
ABCB8-222	ENST00000542328	KRTAP9-2	Q9BYQ4	174 aa		4.7	□□□□□ -1.66
ABCB8-222	ENST00000542328	KRTAP19-5	Q3LI72	72 aa		4.67	□□□□□ -1.66
ABCB8-222	ENST00000542328	MUC2	Q02817	5179 aa		4.62	□□□□□ -1.67
ABCB8-222	ENST00000542328	KRTAP19-6	Q3LI70	58 aa		4.6	□□□□□ -1.67
ABCB8-222	ENST00000542328	KRTAP19-4	Q3LI73	84 aa		4.56	□□□□□ -1.68
ABCB8-222	ENST00000542328	KRTAP4-8	A0A0G2JLE6	195 aa		4.52	□□□□□ -1.69
ABCB8-222	ENST00000542328	KRTAP4-8	Q9BYQ9	185 aa		4.52	□□□□□ -1.69
ABCB8-222	ENST00000542328	LCE3C	Q5T5A8	94 aa		4.5	□□□□□ -1.69
ABCB8-222	ENST00000542328	SPRR2E	P22531	72 aa		4.49	□□□□□ -1.69
ABCB8-222	ENST00000542328	SPRR2B	P35325	72 aa		4.49	□□□□□ -1.69
ABCB8-222	ENST00000542328	SPRR2A	P35326	72 aa		4.49	□□□□□ -1.69
ABCB8-222	ENST00000542328	FSIP2	Q5CZC0	6907 aa		4.47	□□□□□ -1.69
ABCB8-222	ENST00000542328	KRTAP9-6	A0A140TA67	174 aa		4.45	□□□□□ -1.7
ABCB8-222	ENST00000542328	MT1G	P13640	62 aa		4.37	□□□□□ -1.71
ABCB8-222	ENST00000542328	SPRR2D	P22532	72 aa		4.34	□□□□□ -1.71
ABCB8-222	ENST00000542328	MT1E	P04732	61 aa		4.29	□□□□□ -1.72
ABCB8-222	ENST00000542328	KRTAP19-3	Q7Z4W3	81 aa		4.29	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 104 ms