RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 PKHD1P08F94 4074 aa3.94□□□□□ -1.78
PPME1-206ENST00000541340 DNAH11Q96DT5 4516 aa3.92□□□□□ -1.78
PPME1-206ENST00000541340 LRP1BQ9NZR2 4599 aa3.91□□□□□ -1.78
PPME1-206ENST00000541340 A0A0D9SG42 100 aa3.91□□□□□ -1.78
PPME1-206ENST00000541340 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.79
PPME1-206ENST00000541340 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
PPME1-206ENST00000541340 FAT3Q8TDW7 4589 aa3.89□□□□□ -1.79
PPME1-206ENST00000541340 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
PPME1-206ENST00000541340 STARD9Q9P2P6 4700 aa3.88□□□□□ -1.79
PPME1-206ENST00000541340 APLNQ9ULZ1 77 aa3.87□□□□□ -1.79
PPME1-206ENST00000541340 SMR3BP02814 79 aaPredicted RBP3.87□□□□□ -1.79
PPME1-206ENST00000541340 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
PPME1-206ENST00000541340 XP32Q5T750 250 aa3.85□□□□□ -1.79
PPME1-206ENST00000541340 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
PPME1-206ENST00000541340 Q6ZRN7 208 aaPredicted RBP3.84□□□□□ -1.79
PPME1-206ENST00000541340 S4R3F8 94 aa3.84□□□□□ -1.79
PPME1-206ENST00000541340 DYNC1H1Q14204 4646 aaKnown RBP3.83□□□□□ -1.8
PPME1-206ENST00000541340 C9orf92A6NGG3 77 aa3.83□□□□□ -1.8
PPME1-206ENST00000541340 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
PPME1-206ENST00000541340 KRTAP12-2P59991 146 aa3.81□□□□□ -1.8
PPME1-206ENST00000541340 DNAH5Q8TE73 4624 aa3.81□□□□□ -1.8
PPME1-206ENST00000541340 PKD1P98161 4303 aa3.78□□□□□ -1.8
PPME1-206ENST00000541340 KRTAP10-2P60368 255 aa3.75□□□□□ -1.81
PPME1-206ENST00000541340 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
PPME1-206ENST00000541340 ABCA13Q86UQ4 5058 aa3.73□□□□□ -1.81
PPME1-206ENST00000541340 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
PPME1-206ENST00000541340 MYCBP2O75592 4640 aa3.71□□□□□ -1.82
PPME1-206ENST00000541340 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
PPME1-206ENST00000541340 KRTAP1-4P0C5Y4 121 aa3.7□□□□□ -1.82
PPME1-206ENST00000541340 KRTAP10-1P60331 282 aa3.68□□□□□ -1.82
PPME1-206ENST00000541340 KRTAP10-8P60410 259 aa3.68□□□□□ -1.82
PPME1-206ENST00000541340 HSPG2P98160 4391 aa3.67□□□□□ -1.82
PPME1-206ENST00000541340 APOBP04114 4563 aaKnown RBP3.65□□□□□ -1.83
PPME1-206ENST00000541340 FAT1Q14517 4588 aa3.65□□□□□ -1.83
PPME1-206ENST00000541340 R4GN34 69 aa3.64□□□□□ -1.83
PPME1-206ENST00000541340 LPAP08519 4548 aa3.64□□□□□ -1.83
PPME1-206ENST00000541340 TNXBP22105 4242 aa3.63□□□□□ -1.83
PPME1-206ENST00000541340 RYR1P21817 5038 aa3.61□□□□□ -1.83
PPME1-206ENST00000541340 LRP1Q07954 4544 aaKnown RBP3.6□□□□□ -1.83
PPME1-206ENST00000541340 LCE2BO14633 110 aa3.57□□□□□ -1.84
PPME1-206ENST00000541340 INE1O15225 51 aa3.52□□□□□ -1.85
PPME1-206ENST00000541340 LCE2CQ5TA81 110 aa3.52□□□□□ -1.85
PPME1-206ENST00000541340 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
PPME1-206ENST00000541340 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
PPME1-206ENST00000541340 M0QZ58 72 aa3.48□□□□□ -1.85
PPME1-206ENST00000541340 A0A1B0GVY2 172 aa3.47□□□□□ -1.85
PPME1-206ENST00000541340 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
PPME1-206ENST00000541340 HMCN2Q8NDA2 5059 aa3.43□□□□□ -1.86
PPME1-206ENST00000541340 LRP2P98164 4655 aa3.43□□□□□ -1.86
PPME1-206ENST00000541340 Q5VSD8 79 aa3.4□□□□□ -1.86
PPME1-206ENST00000541340 RPS29P62273 56 aaKnown RBP3.39□□□□□ -1.87
PPME1-206ENST00000541340 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
PPME1-206ENST00000541340 LORP23490 312 aaPredicted RBP3.36□□□□□ -1.87
PPME1-206ENST00000541340 KRTAP23-1A1A580 65 aa3.33□□□□□ -1.88
PPME1-206ENST00000541340 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
PPME1-206ENST00000541340 KRTAP10-4P60372 401 aaPredicted RBP3.3□□□□□ -1.88
PPME1-206ENST00000541340 KRTAP4-5Q9BYR2 181 aa3.27□□□□□ -1.89
PPME1-206ENST00000541340 HERC1Q15751 4861 aa3.25□□□□□ -1.89
PPME1-206ENST00000541340 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
PPME1-206ENST00000541340 MUC2Q02817 5179 aa3.23□□□□□ -1.89
PPME1-206ENST00000541340 M0R2T5 61 aa3.19□□□□□ -1.9
PPME1-206ENST00000541340 UBR4Q5T4S7 5183 aa3.16□□□□□ -1.9
PPME1-206ENST00000541340 KRTAP9-2Q9BYQ4 174 aa3.15□□□□□ -1.91
PPME1-206ENST00000541340 TNP1P09430 55 aa3.13□□□□□ -1.91
PPME1-206ENST00000541340 MT1HL1P0DM35 61 aa3.07□□□□□ -1.92
PPME1-206ENST00000541340 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
PPME1-206ENST00000541340 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
PPME1-206ENST00000541340 RNF213Q63HN8 5207 aa3.01□□□□□ -1.93
PPME1-206ENST00000541340 KRTAP4-1Q9BYQ7 146 aa2.99□□□□□ -1.93
PPME1-206ENST00000541340 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
PPME1-206ENST00000541340 FLGP20930 4061 aaPredicted RBP2.97□□□□□ -1.93
PPME1-206ENST00000541340 KRTAP19-2Q3LHN2 52 aa2.92□□□□□ -1.94
PPME1-206ENST00000541340 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
PPME1-206ENST00000541340 CRCT1Q9UGL9 99 aa2.86□□□□□ -1.95
PPME1-206ENST00000541340 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
PPME1-206ENST00000541340 KMT2DO14686 5537 aa2.83□□□□□ -1.96
PPME1-206ENST00000541340 FSIP2Q5CZC0 6907 aa2.82□□□□□ -1.96
PPME1-206ENST00000541340 LOC100996750A0A140TA64 210 aa2.81□□□□□ -1.96
PPME1-206ENST00000541340 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
PPME1-206ENST00000541340 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
PPME1-206ENST00000541340 KRTAP9-7A8MTY7 169 aa2.78□□□□□ -1.97
PPME1-206ENST00000541340 KRTAP19-1Q8IUB9 90 aa2.76□□□□□ -1.97
PPME1-206ENST00000541340 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
PPME1-206ENST00000541340 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
PPME1-206ENST00000541340 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
PPME1-206ENST00000541340 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
PPME1-206ENST00000541340 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
PPME1-206ENST00000541340 USH2AO75445 5202 aa2.7□□□□□ -1.98
PPME1-206ENST00000541340 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
PPME1-206ENST00000541340 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
PPME1-206ENST00000541340 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
PPME1-206ENST00000541340 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
PPME1-206ENST00000541340 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
PPME1-206ENST00000541340 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
PPME1-206ENST00000541340 MT1XP80297 61 aa2.62□□□□□ -1.99
PPME1-206ENST00000541340 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
PPME1-206ENST00000541340 MT1HP80294 61 aa2.61□□□□□ -1.99
PPME1-206ENST00000541340 KRTAP4-7Q9BYR0 210 aa2.6□□□□□ -1.99
PPME1-206ENST00000541340 MT1FP04733 61 aa2.59□□□□□ -2
PPME1-206ENST00000541340 KRTAP19-5Q3LI72 72 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms