RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 A0A0D9SG42 100 aa8.9□□□□□ -0.98
EPB41L3-204ENST00000540638 HSPG2P98160 4391 aa8.89□□□□□ -0.99
EPB41L3-204ENST00000540638 PKHD1L1Q86WI1 4243 aa8.88□□□□□ -0.99
EPB41L3-204ENST00000540638 J3QL48 77 aa8.86□□□□□ -0.99
EPB41L3-204ENST00000540638 KRTAP4-5Q9BYR2 181 aa8.83□□□□□ -1
EPB41L3-204ENST00000540638 MT1HL1P0DM35 61 aa8.82□□□□□ -1
EPB41L3-204ENST00000540638 S4R3F8 94 aa8.82□□□□□ -1
EPB41L3-204ENST00000540638 RBM12B-AS1Q9P1G2 102 aa8.81□□□□□ -1
EPB41L3-204ENST00000540638 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
EPB41L3-204ENST00000540638 H0YAA0 97 aa8.79□□□□□ -1
EPB41L3-204ENST00000540638 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
EPB41L3-204ENST00000540638 K7ERS5 55 aa8.76□□□□□ -1.01
EPB41L3-204ENST00000540638 CRIPTQ9P021 101 aa8.76□□□□□ -1.01
EPB41L3-204ENST00000540638 LRP2P98164 4655 aa8.7□□□□□ -1.02
EPB41L3-204ENST00000540638 TNXBP22105 4242 aa8.69□□□□□ -1.02
EPB41L3-204ENST00000540638 CSAG1Q6PB30 78 aa8.67□□□□□ -1.02
EPB41L3-204ENST00000540638 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
EPB41L3-204ENST00000540638 P0C880 135 aa8.62□□□□□ -1.03
EPB41L3-204ENST00000540638 LPAP08519 4548 aa8.62□□□□□ -1.03
EPB41L3-204ENST00000540638 SPINT4Q6UDR6 99 aa8.6□□□□□ -1.03
EPB41L3-204ENST00000540638 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
EPB41L3-204ENST00000540638 TPRXLQ17RH7 258 aa8.57□□□□□ -1.04
EPB41L3-204ENST00000540638 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
EPB41L3-204ENST00000540638 KRTAP13-4Q3LI77 160 aa8.51□□□□□ -1.05
EPB41L3-204ENST00000540638 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
EPB41L3-204ENST00000540638 SEC61BP60468 96 aaKnown RBP8.47□□□□□ -1.05
EPB41L3-204ENST00000540638 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
EPB41L3-204ENST00000540638 HERC2O95714 4834 aa8.39□□□□□ -1.07
EPB41L3-204ENST00000540638 M0QZ58 72 aa8.37□□□□□ -1.07
EPB41L3-204ENST00000540638 R4GN34 69 aa8.35□□□□□ -1.07
EPB41L3-204ENST00000540638 ROMO1P60602 79 aa8.31□□□□□ -1.08
EPB41L3-204ENST00000540638 KRTAP12-2P59991 146 aa8.27□□□□□ -1.09
EPB41L3-204ENST00000540638 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
EPB41L3-204ENST00000540638 MUC2Q02817 5179 aa8.26□□□□□ -1.09
EPB41L3-204ENST00000540638 KRTAP25-1Q3LHN0 102 aa8.25□□□□□ -1.09
EPB41L3-204ENST00000540638 KRTAP4-1Q9BYQ7 146 aa8.25□□□□□ -1.09
EPB41L3-204ENST00000540638 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
EPB41L3-204ENST00000540638 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
EPB41L3-204ENST00000540638 HERC1Q15751 4861 aa8.08□□□□□ -1.12
EPB41L3-204ENST00000540638 M0R2T5 61 aa8.06□□□□□ -1.12
EPB41L3-204ENST00000540638 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
EPB41L3-204ENST00000540638 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
EPB41L3-204ENST00000540638 PCLOQ9Y6V0 5065 aa7.91□□□□□ -1.14
EPB41L3-204ENST00000540638 H3BS24 57 aa7.88□□□□□ -1.15
EPB41L3-204ENST00000540638 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
EPB41L3-204ENST00000540638 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
EPB41L3-204ENST00000540638 MUC17Q685J3 4493 aa7.85□□□□□ -1.15
EPB41L3-204ENST00000540638 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
EPB41L3-204ENST00000540638 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
EPB41L3-204ENST00000540638 HMCN2Q8NDA2 5059 aa7.65□□□□□ -1.18
EPB41L3-204ENST00000540638 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
EPB41L3-204ENST00000540638 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
EPB41L3-204ENST00000540638 FLGP20930 4061 aaPredicted RBP7.54□□□□□ -1.2
EPB41L3-204ENST00000540638 NDUFAF8A1L188 74 aa7.51□□□□□ -1.21
EPB41L3-204ENST00000540638 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
EPB41L3-204ENST00000540638 TNP1P09430 55 aa7.46□□□□□ -1.22
EPB41L3-204ENST00000540638 MT1HP80294 61 aa7.43□□□□□ -1.22
EPB41L3-204ENST00000540638 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
EPB41L3-204ENST00000540638 MT1FP04733 61 aa7.31□□□□□ -1.24
EPB41L3-204ENST00000540638 MT2AP02795 61 aa7.29□□□□□ -1.24
EPB41L3-204ENST00000540638 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
EPB41L3-204ENST00000540638 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
EPB41L3-204ENST00000540638 LUZP6Q538Z0 58 aa7.2□□□□□ -1.26
EPB41L3-204ENST00000540638 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
EPB41L3-204ENST00000540638 KRTAP9-8Q9BYQ0 159 aa7.14□□□□□ -1.27
EPB41L3-204ENST00000540638 LCE3AQ5TA76 89 aa7.04□□□□□ -1.28
EPB41L3-204ENST00000540638 USH2AO75445 5202 aa6.99□□□□□ -1.29
EPB41L3-204ENST00000540638 MT1BP07438 61 aa6.91□□□□□ -1.3
EPB41L3-204ENST00000540638 FSIP2Q5CZC0 6907 aa6.88□□□□□ -1.31
EPB41L3-204ENST00000540638 KRTAP19-8Q3LI54 63 aa6.84□□□□□ -1.31
EPB41L3-204ENST00000540638 MT1XP80297 61 aa6.83□□□□□ -1.32
EPB41L3-204ENST00000540638 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
EPB41L3-204ENST00000540638 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
EPB41L3-204ENST00000540638 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
EPB41L3-204ENST00000540638 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
EPB41L3-204ENST00000540638 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
EPB41L3-204ENST00000540638 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
EPB41L3-204ENST00000540638 KMT2DO14686 5537 aa6.72□□□□□ -1.33
EPB41L3-204ENST00000540638 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
EPB41L3-204ENST00000540638 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
EPB41L3-204ENST00000540638 LCE2BO14633 110 aa6.7□□□□□ -1.34
EPB41L3-204ENST00000540638 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
EPB41L3-204ENST00000540638 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
EPB41L3-204ENST00000540638 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
EPB41L3-204ENST00000540638 LCE2AQ5TA79 106 aaPredicted RBP6.52□□□□□ -1.37
EPB41L3-204ENST00000540638 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
EPB41L3-204ENST00000540638 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.38
EPB41L3-204ENST00000540638 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
EPB41L3-204ENST00000540638 SSPOA2VEC9 5147 aa6.21□□□□□ -1.41
EPB41L3-204ENST00000540638 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
EPB41L3-204ENST00000540638 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
EPB41L3-204ENST00000540638 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
EPB41L3-204ENST00000540638 KRTAP19-7Q3SYF9 63 aa6.06□□□□□ -1.44
EPB41L3-204ENST00000540638 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
EPB41L3-204ENST00000540638 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.45
EPB41L3-204ENST00000540638 KRTAP9-6A8MVA2 160 aa5.93□□□□□ -1.46
EPB41L3-204ENST00000540638 MT1EP04732 61 aa5.92□□□□□ -1.46
EPB41L3-204ENST00000540638 MT1LQ93083 61 aa5.9□□□□□ -1.46
EPB41L3-204ENST00000540638 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
EPB41L3-204ENST00000540638 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms