RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 K7ERS5 55 aa6.38□□□□□ -1.39
NPC1-202ENST00000540608 HSPG2P98160 4391 aa6.36□□□□□ -1.39
NPC1-202ENST00000540608 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
NPC1-202ENST00000540608 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.39
NPC1-202ENST00000540608 Q5VSD8 79 aa6.33□□□□□ -1.4
NPC1-202ENST00000540608 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
NPC1-202ENST00000540608 RPL37P61927 97 aaKnown RBP6.32□□□□□ -1.4
NPC1-202ENST00000540608 RYR1P21817 5038 aa6.29□□□□□ -1.4
NPC1-202ENST00000540608 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
NPC1-202ENST00000540608 KRTAP17-1Q9BYP8 105 aa6.28□□□□□ -1.4
NPC1-202ENST00000540608 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
NPC1-202ENST00000540608 MYCBP2O75592 4640 aa6.27□□□□□ -1.41
NPC1-202ENST00000540608 XP32Q5T750 250 aa6.26□□□□□ -1.41
NPC1-202ENST00000540608 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
NPC1-202ENST00000540608 ROMO1P60602 79 aa6.25□□□□□ -1.41
NPC1-202ENST00000540608 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
NPC1-202ENST00000540608 S4R3F8 94 aa6.25□□□□□ -1.41
NPC1-202ENST00000540608 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
NPC1-202ENST00000540608 KIAA1109Q2LD37 5005 aa6.2□□□□□ -1.42
NPC1-202ENST00000540608 A0A0D9SG42 100 aa6.2□□□□□ -1.42
NPC1-202ENST00000540608 P0C880 135 aa6.17□□□□□ -1.42
NPC1-202ENST00000540608 MT1HL1P0DM35 61 aa6.17□□□□□ -1.42
NPC1-202ENST00000540608 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.42
NPC1-202ENST00000540608 LPAP08519 4548 aa6.11□□□□□ -1.43
NPC1-202ENST00000540608 H3BS24 57 aa6.09□□□□□ -1.43
NPC1-202ENST00000540608 TPRXLQ17RH7 258 aa6.09□□□□□ -1.43
NPC1-202ENST00000540608 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
NPC1-202ENST00000540608 LRP2P98164 4655 aa6.06□□□□□ -1.44
NPC1-202ENST00000540608 HERC2O95714 4834 aa6.06□□□□□ -1.44
NPC1-202ENST00000540608 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
NPC1-202ENST00000540608 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
NPC1-202ENST00000540608 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
NPC1-202ENST00000540608 M0QZ58 72 aa6□□□□□ -1.45
NPC1-202ENST00000540608 ABCA13Q86UQ4 5058 aa6□□□□□ -1.45
NPC1-202ENST00000540608 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
NPC1-202ENST00000540608 LCE2DQ5TA82 110 aaPredicted RBP5.92□□□□□ -1.46
NPC1-202ENST00000540608 J3QL48 77 aa5.88□□□□□ -1.47
NPC1-202ENST00000540608 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
NPC1-202ENST00000540608 R4GN34 69 aa5.8□□□□□ -1.48
NPC1-202ENST00000540608 MUC17Q685J3 4493 aa5.79□□□□□ -1.48
NPC1-202ENST00000540608 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
NPC1-202ENST00000540608 SEC61BP60468 96 aaKnown RBP5.77□□□□□ -1.49
NPC1-202ENST00000540608 KRTAP4-1Q9BYQ7 146 aa5.75□□□□□ -1.49
NPC1-202ENST00000540608 NDUFAF8A1L188 74 aa5.71□□□□□ -1.5
NPC1-202ENST00000540608 LORP23490 312 aaPredicted RBP5.71□□□□□ -1.5
NPC1-202ENST00000540608 KRTAP19-2Q3LHN2 52 aa5.64□□□□□ -1.51
NPC1-202ENST00000540608 MUC2Q02817 5179 aa5.61□□□□□ -1.51
NPC1-202ENST00000540608 HMCN2Q8NDA2 5059 aa5.56□□□□□ -1.52
NPC1-202ENST00000540608 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
NPC1-202ENST00000540608 HERC1Q15751 4861 aa5.55□□□□□ -1.52
NPC1-202ENST00000540608 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
NPC1-202ENST00000540608 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
NPC1-202ENST00000540608 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
NPC1-202ENST00000540608 FLGP20930 4061 aaPredicted RBP5.47□□□□□ -1.53
NPC1-202ENST00000540608 TNP1P09430 55 aa5.34□□□□□ -1.55
NPC1-202ENST00000540608 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.55
NPC1-202ENST00000540608 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
NPC1-202ENST00000540608 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
NPC1-202ENST00000540608 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
NPC1-202ENST00000540608 UBR4Q5T4S7 5183 aa5.25□□□□□ -1.57
NPC1-202ENST00000540608 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
NPC1-202ENST00000540608 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
NPC1-202ENST00000540608 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
NPC1-202ENST00000540608 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
NPC1-202ENST00000540608 M0R2T5 61 aa5.16□□□□□ -1.58
NPC1-202ENST00000540608 MT1HP80294 61 aa5.16□□□□□ -1.58
NPC1-202ENST00000540608 MT1FP04733 61 aa5.08□□□□□ -1.6
NPC1-202ENST00000540608 MT2AP02795 61 aa5.07□□□□□ -1.6
NPC1-202ENST00000540608 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
NPC1-202ENST00000540608 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
NPC1-202ENST00000540608 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
NPC1-202ENST00000540608 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
NPC1-202ENST00000540608 LCE2AQ5TA79 106 aaPredicted RBP4.96□□□□□ -1.62
NPC1-202ENST00000540608 LCE2BO14633 110 aa4.94□□□□□ -1.62
NPC1-202ENST00000540608 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
NPC1-202ENST00000540608 MT1BP07438 61 aa4.9□□□□□ -1.62
NPC1-202ENST00000540608 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
NPC1-202ENST00000540608 MT1XP80297 61 aa4.87□□□□□ -1.63
NPC1-202ENST00000540608 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
NPC1-202ENST00000540608 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
NPC1-202ENST00000540608 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
NPC1-202ENST00000540608 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
NPC1-202ENST00000540608 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
NPC1-202ENST00000540608 INE1O15225 51 aa4.64□□□□□ -1.67
NPC1-202ENST00000540608 USH2AO75445 5202 aa4.63□□□□□ -1.67
NPC1-202ENST00000540608 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
NPC1-202ENST00000540608 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
NPC1-202ENST00000540608 KMT2DO14686 5537 aa4.52□□□□□ -1.69
NPC1-202ENST00000540608 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
NPC1-202ENST00000540608 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
NPC1-202ENST00000540608 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
NPC1-202ENST00000540608 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
NPC1-202ENST00000540608 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
NPC1-202ENST00000540608 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
NPC1-202ENST00000540608 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
NPC1-202ENST00000540608 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
NPC1-202ENST00000540608 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
NPC1-202ENST00000540608 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
NPC1-202ENST00000540608 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
NPC1-202ENST00000540608 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms