RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 TNXBP22105 4242 aa6.5□□□□□ -1.37
NEK6-213ENST00000540326 DMBT1Q9UGM3 2413 aaPredicted RBP6.49□□□□□ -1.37
NEK6-213ENST00000540326 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
NEK6-213ENST00000540326 P0C880 135 aa6.44□□□□□ -1.38
NEK6-213ENST00000540326 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
NEK6-213ENST00000540326 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
NEK6-213ENST00000540326 Q5VSD8 79 aa6.42□□□□□ -1.38
NEK6-213ENST00000540326 RPL37P61927 97 aaKnown RBP6.4□□□□□ -1.39
NEK6-213ENST00000540326 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.39
NEK6-213ENST00000540326 XP32Q5T750 250 aa6.39□□□□□ -1.39
NEK6-213ENST00000540326 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
NEK6-213ENST00000540326 K7ERS5 55 aa6.34□□□□□ -1.39
NEK6-213ENST00000540326 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
NEK6-213ENST00000540326 RYR3Q15413 4870 aa6.34□□□□□ -1.4
NEK6-213ENST00000540326 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
NEK6-213ENST00000540326 S4R3F8 94 aa6.32□□□□□ -1.4
NEK6-213ENST00000540326 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
NEK6-213ENST00000540326 A0A0D9SG42 100 aa6.31□□□□□ -1.4
NEK6-213ENST00000540326 RYR1P21817 5038 aa6.31□□□□□ -1.4
NEK6-213ENST00000540326 LPAP08519 4548 aa6.3□□□□□ -1.4
NEK6-213ENST00000540326 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
NEK6-213ENST00000540326 KIAA1109Q2LD37 5005 aa6.28□□□□□ -1.4
NEK6-213ENST00000540326 MT1HL1P0DM35 61 aa6.24□□□□□ -1.41
NEK6-213ENST00000540326 LRP2P98164 4655 aa6.23□□□□□ -1.41
NEK6-213ENST00000540326 NDUFAF8A1L188 74 aa6.17□□□□□ -1.42
NEK6-213ENST00000540326 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
NEK6-213ENST00000540326 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
NEK6-213ENST00000540326 EPPK1P58107 5090 aaKnown RBP6.11□□□□□ -1.43
NEK6-213ENST00000540326 TPRXLQ17RH7 258 aa6.1□□□□□ -1.43
NEK6-213ENST00000540326 SPINT4Q6UDR6 99 aa6.08□□□□□ -1.44
NEK6-213ENST00000540326 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
NEK6-213ENST00000540326 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
NEK6-213ENST00000540326 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
NEK6-213ENST00000540326 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
NEK6-213ENST00000540326 M0QZ58 72 aa5.99□□□□□ -1.45
NEK6-213ENST00000540326 LUZP6Q538Z0 58 aa5.98□□□□□ -1.45
NEK6-213ENST00000540326 R4GN34 69 aa5.9□□□□□ -1.47
NEK6-213ENST00000540326 MUC17Q685J3 4493 aa5.9□□□□□ -1.47
NEK6-213ENST00000540326 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
NEK6-213ENST00000540326 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
NEK6-213ENST00000540326 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
NEK6-213ENST00000540326 LORP23490 312 aaPredicted RBP5.85□□□□□ -1.47
NEK6-213ENST00000540326 MUC2Q02817 5179 aa5.79□□□□□ -1.48
NEK6-213ENST00000540326 J3QL48 77 aa5.78□□□□□ -1.48
NEK6-213ENST00000540326 HERC2O95714 4834 aa5.76□□□□□ -1.49
NEK6-213ENST00000540326 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
NEK6-213ENST00000540326 KRTAP19-2Q3LHN2 52 aa5.71□□□□□ -1.49
NEK6-213ENST00000540326 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
NEK6-213ENST00000540326 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
NEK6-213ENST00000540326 HERC1Q15751 4861 aa5.55□□□□□ -1.52
NEK6-213ENST00000540326 PCLOQ9Y6V0 5065 aa5.55□□□□□ -1.52
NEK6-213ENST00000540326 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
NEK6-213ENST00000540326 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
NEK6-213ENST00000540326 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
NEK6-213ENST00000540326 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
NEK6-213ENST00000540326 TNP1P09430 55 aa5.36□□□□□ -1.55
NEK6-213ENST00000540326 LCE2CQ5TA81 110 aa5.36□□□□□ -1.55
NEK6-213ENST00000540326 RNF213Q63HN8 5207 aa5.33□□□□□ -1.56
NEK6-213ENST00000540326 M0R2T5 61 aa5.29□□□□□ -1.56
NEK6-213ENST00000540326 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
NEK6-213ENST00000540326 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
NEK6-213ENST00000540326 UBR4Q5T4S7 5183 aa5.26□□□□□ -1.57
NEK6-213ENST00000540326 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
NEK6-213ENST00000540326 MT1HP80294 61 aa5.22□□□□□ -1.57
NEK6-213ENST00000540326 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
NEK6-213ENST00000540326 MT1FP04733 61 aa5.17□□□□□ -1.58
NEK6-213ENST00000540326 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
NEK6-213ENST00000540326 MT2AP02795 61 aa5.15□□□□□ -1.59
NEK6-213ENST00000540326 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
NEK6-213ENST00000540326 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
NEK6-213ENST00000540326 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
NEK6-213ENST00000540326 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
NEK6-213ENST00000540326 MT1BP07438 61 aa4.99□□□□□ -1.61
NEK6-213ENST00000540326 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
NEK6-213ENST00000540326 MT1XP80297 61 aa4.97□□□□□ -1.61
NEK6-213ENST00000540326 KRTAP8-1Q8IUC2 63 aa4.94□□□□□ -1.62
NEK6-213ENST00000540326 INE1O15225 51 aa4.92□□□□□ -1.62
NEK6-213ENST00000540326 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
NEK6-213ENST00000540326 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
NEK6-213ENST00000540326 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
NEK6-213ENST00000540326 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
NEK6-213ENST00000540326 USH2AO75445 5202 aa4.77□□□□□ -1.65
NEK6-213ENST00000540326 LCE2BO14633 110 aa4.73□□□□□ -1.65
NEK6-213ENST00000540326 KMT2DO14686 5537 aa4.7□□□□□ -1.66
NEK6-213ENST00000540326 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
NEK6-213ENST00000540326 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
NEK6-213ENST00000540326 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.68
NEK6-213ENST00000540326 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.68
NEK6-213ENST00000540326 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
NEK6-213ENST00000540326 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
NEK6-213ENST00000540326 KRTAP9-2Q9BYQ4 174 aa4.5□□□□□ -1.69
NEK6-213ENST00000540326 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
NEK6-213ENST00000540326 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
NEK6-213ENST00000540326 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
NEK6-213ENST00000540326 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
NEK6-213ENST00000540326 KRTAP4-6Q9BYQ5 205 aa4.35□□□□□ -1.71
NEK6-213ENST00000540326 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
NEK6-213ENST00000540326 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
NEK6-213ENST00000540326 MT1LQ93083 61 aa4.29□□□□□ -1.72
NEK6-213ENST00000540326 MT1EP04732 61 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms