RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
SNRPA1-203ENST00000540017 MT-ATP8P03928 68 aa8.34□□□□□ -1.07
SNRPA1-203ENST00000540017 SCGB1A1P11684 91 aa8.33□□□□□ -1.08
SNRPA1-203ENST00000540017 KRTAP19-6Q3LI70 58 aa8.32□□□□□ -1.08
SNRPA1-203ENST00000540017 K7ERU9 68 aa8.31□□□□□ -1.08
SNRPA1-203ENST00000540017 IMUPQ9GZP8 106 aa8.29□□□□□ -1.08
SNRPA1-203ENST00000540017 A8MUN3 132 aa8.28□□□□□ -1.08
SNRPA1-203ENST00000540017 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
SNRPA1-203ENST00000540017 H3BPC8 53 aa8.28□□□□□ -1.08
SNRPA1-203ENST00000540017 NDUFC1O43677 76 aa8.25□□□□□ -1.09
SNRPA1-203ENST00000540017 SPRR2GQ9BYE4 73 aa8.24□□□□□ -1.09
SNRPA1-203ENST00000540017 MT1BP07438 61 aa8.18□□□□□ -1.1
SNRPA1-203ENST00000540017 KRTAP19-8Q3LI54 63 aa8.17□□□□□ -1.1
SNRPA1-203ENST00000540017 TRAV7A0A075B6U4 112 aa8.15□□□□□ -1.1
SNRPA1-203ENST00000540017 H0YAA0 97 aa8.15□□□□□ -1.1
SNRPA1-203ENST00000540017 DMAC1Q96GE9 116 aa8.15□□□□□ -1.1
SNRPA1-203ENST00000540017 KRTAP9-7A8MTY7 169 aa8.12□□□□□ -1.11
SNRPA1-203ENST00000540017 Q5VV11 94 aa8.12□□□□□ -1.11
SNRPA1-203ENST00000540017 SMIM20Q8N5G0 67 aa8.11□□□□□ -1.11
SNRPA1-203ENST00000540017 CRIPTQ9P021 101 aa8.1□□□□□ -1.11
SNRPA1-203ENST00000540017 ADM2Q7Z4H4 148 aa8.09□□□□□ -1.11
SNRPA1-203ENST00000540017 MACF1Q9UPN3 7388 aaKnown RBP8.06□□□□□ -1.12
SNRPA1-203ENST00000540017 SNURFQ9Y675 71 aa8□□□□□ -1.13
SNRPA1-203ENST00000540017 A6NN06 94 aa7.96□□□□□ -1.14
SNRPA1-203ENST00000540017 P0C880 135 aa7.96□□□□□ -1.14
SNRPA1-203ENST00000540017 ACYP2P14621 99 aa7.95□□□□□ -1.14
SNRPA1-203ENST00000540017 KRTAP10-5P60370 271 aa7.93□□□□□ -1.14
SNRPA1-203ENST00000540017 SERP2Q8N6R1 65 aa7.93□□□□□ -1.14
SNRPA1-203ENST00000540017 C20orf197Q8N268 126 aa7.91□□□□□ -1.14
SNRPA1-203ENST00000540017 SYNE2Q8WXH0 6885 aaKnown RBP7.9□□□□□ -1.14
SNRPA1-203ENST00000540017 R4GN34 69 aa7.84□□□□□ -1.15
SNRPA1-203ENST00000540017 SPANXA2-OT1Q8N9U9 137 aa7.82□□□□□ -1.16
SNRPA1-203ENST00000540017 M0QZ58 72 aa7.8□□□□□ -1.16
SNRPA1-203ENST00000540017 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
SNRPA1-203ENST00000540017 SPTSSBQ8NFR3 76 aa7.79□□□□□ -1.16
SNRPA1-203ENST00000540017 KRTAP6-3Q3LI67 103 aa7.78□□□□□ -1.16
SNRPA1-203ENST00000540017 COX7CP15954 63 aa7.73□□□□□ -1.17
SNRPA1-203ENST00000540017 MT1XP80297 61 aa7.71□□□□□ -1.18
SNRPA1-203ENST00000540017 PLAC4Q8WY50 150 aa7.71□□□□□ -1.18
SNRPA1-203ENST00000540017 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
SNRPA1-203ENST00000540017 CYSTM1Q9H1C7 97 aa7.66□□□□□ -1.18
SNRPA1-203ENST00000540017 COA5Q86WW8 74 aa7.63□□□□□ -1.19
SNRPA1-203ENST00000540017 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
SNRPA1-203ENST00000540017 H7BZZ5 65 aa7.6□□□□□ -1.19
SNRPA1-203ENST00000540017 KRTAP13-4Q3LI77 160 aa7.52□□□□□ -1.21
SNRPA1-203ENST00000540017 ANAPC13Q9BS18 74 aa7.52□□□□□ -1.21
SNRPA1-203ENST00000540017 KRTAP5-9P26371 169 aa7.5□□□□□ -1.21
SNRPA1-203ENST00000540017 MUC12Q9UKN1 5478 aa7.49□□□□□ -1.21
SNRPA1-203ENST00000540017 KMT2DO14686 5537 aa7.48□□□□□ -1.21
SNRPA1-203ENST00000540017 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
SNRPA1-203ENST00000540017 CCDC179H3BU77 68 aa7.42□□□□□ -1.22
SNRPA1-203ENST00000540017 NEBP20929 6669 aa7.42□□□□□ -1.22
SNRPA1-203ENST00000540017 KRTAP10-7P60409 375 aaPredicted RBP7.37□□□□□ -1.23
SNRPA1-203ENST00000540017 SEC61GP60059 68 aa7.36□□□□□ -1.23
SNRPA1-203ENST00000540017 SERP1Q9Y6X1 66 aa7.36□□□□□ -1.23
SNRPA1-203ENST00000540017 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
SNRPA1-203ENST00000540017 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
SNRPA1-203ENST00000540017 KRTAP8-1Q8IUC2 63 aa7.33□□□□□ -1.24
SNRPA1-203ENST00000540017 SPRR2FQ96RM1 72 aa7.31□□□□□ -1.24
SNRPA1-203ENST00000540017 MDN1Q9NU22 5596 aa7.3□□□□□ -1.24
SNRPA1-203ENST00000540017 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
SNRPA1-203ENST00000540017 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
SNRPA1-203ENST00000540017 A0A1B0GU33 70 aa7.27□□□□□ -1.25
SNRPA1-203ENST00000540017 A0A0D9SG42 100 aa7.26□□□□□ -1.25
SNRPA1-203ENST00000540017 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
SNRPA1-203ENST00000540017 A0A1B0GU69 56 aa7.2□□□□□ -1.26
SNRPA1-203ENST00000540017 ATP5EP56381 51 aaPredicted RBP7.19□□□□□ -1.26
SNRPA1-203ENST00000540017 SPRR2EP22531 72 aa7.17□□□□□ -1.26
SNRPA1-203ENST00000540017 SPRR2BP35325 72 aa7.17□□□□□ -1.26
SNRPA1-203ENST00000540017 SPRR2AP35326 72 aa7.17□□□□□ -1.26
SNRPA1-203ENST00000540017 KRTAP12-1P59990 96 aa7.14□□□□□ -1.27
SNRPA1-203ENST00000540017 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
SNRPA1-203ENST00000540017 KRTAP20-1Q3LI63 56 aa7.12□□□□□ -1.27
SNRPA1-203ENST00000540017 LCE1AQ5T7P2 110 aa7.12□□□□□ -1.27
SNRPA1-203ENST00000540017 TMEM258P61165 79 aa7.08□□□□□ -1.28
SNRPA1-203ENST00000540017 A8MU10 97 aa7.07□□□□□ -1.28
SNRPA1-203ENST00000540017 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
SNRPA1-203ENST00000540017 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
SNRPA1-203ENST00000540017 PRR15LQ9BU68 103 aa6.99□□□□□ -1.29
SNRPA1-203ENST00000540017 KRTAP2-3P0C7H8 128 aa6.97□□□□□ -1.29
SNRPA1-203ENST00000540017 KRTAP2-4Q9BYR9 128 aa6.97□□□□□ -1.29
SNRPA1-203ENST00000540017 SPRR2DP22532 72 aa6.92□□□□□ -1.3
SNRPA1-203ENST00000540017 KRTAP19-7Q3SYF9 63 aa6.88□□□□□ -1.31
SNRPA1-203ENST00000540017 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
SNRPA1-203ENST00000540017 MT1EP04732 61 aa6.8□□□□□ -1.32
SNRPA1-203ENST00000540017 UQCR11O14957 56 aa6.79□□□□□ -1.32
SNRPA1-203ENST00000540017 KRTAP2-2Q9BYT5 123 aa6.77□□□□□ -1.33
SNRPA1-203ENST00000540017 KRTAP2-1Q9BYU5 128 aa6.77□□□□□ -1.33
SNRPA1-203ENST00000540017 KRTAP19-5Q3LI72 72 aa6.75□□□□□ -1.33
SNRPA1-203ENST00000540017 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
SNRPA1-203ENST00000540017 LCE5AQ5TCM9 118 aa6.71□□□□□ -1.34
SNRPA1-203ENST00000540017 TNP1P09430 55 aa6.7□□□□□ -1.34
SNRPA1-203ENST00000540017 KRTAP19-3Q7Z4W3 81 aa6.69□□□□□ -1.34
SNRPA1-203ENST00000540017 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
SNRPA1-203ENST00000540017 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
SNRPA1-203ENST00000540017 PSPHP1O15172 72 aa6.66□□□□□ -1.34
SNRPA1-203ENST00000540017 Q1T7F1 81 aa6.65□□□□□ -1.34
SNRPA1-203ENST00000540017 V9GYY9 64 aa6.63□□□□□ -1.35
SNRPA1-203ENST00000540017 MT1GP13640 62 aa6.55□□□□□ -1.36
SNRPA1-203ENST00000540017 MT1LQ93083 61 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms