RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
GNE-205ENST00000539815 H3BQ85 93 aa4.26□□□□□ -1.73
GNE-205ENST00000539815 C8orf17Q9NRJ1 99 aa4.26□□□□□ -1.73
GNE-205ENST00000539815 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
GNE-205ENST00000539815 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
GNE-205ENST00000539815 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
GNE-205ENST00000539815 PKD1P98161 4303 aa4.25□□□□□ -1.73
GNE-205ENST00000539815 KRTAP13-3Q3SY46 172 aa4.25□□□□□ -1.73
GNE-205ENST00000539815 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
GNE-205ENST00000539815 KRTAP7-1Q8IUC3 87 aa4.23□□□□□ -1.73
GNE-205ENST00000539815 Q96NJ1 140 aa4.22□□□□□ -1.73
GNE-205ENST00000539815 H3BPC8 53 aa4.22□□□□□ -1.73
GNE-205ENST00000539815 XP32Q5T750 250 aa4.21□□□□□ -1.74
GNE-205ENST00000539815 LINC00472Q9H8W2 130 aa4.2□□□□□ -1.74
GNE-205ENST00000539815 A0A0G2JQZ4 141 aa4.19□□□□□ -1.74
GNE-205ENST00000539815 A0A1B0GU69 56 aa4.19□□□□□ -1.74
GNE-205ENST00000539815 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
GNE-205ENST00000539815 Q8N377 158 aa4.18□□□□□ -1.74
GNE-205ENST00000539815 UQCR11O14957 56 aa4.18□□□□□ -1.74
GNE-205ENST00000539815 KRTAP13-1Q8IUC0 172 aa4.18□□□□□ -1.74
GNE-205ENST00000539815 PKHD1L1Q86WI1 4243 aa4.18□□□□□ -1.74
GNE-205ENST00000539815 IGLV5-48A0A075B6I7 105 aa4.17□□□□□ -1.74
GNE-205ENST00000539815 A0A1B0GW54 56 aa4.16□□□□□ -1.74
GNE-205ENST00000539815 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.74
GNE-205ENST00000539815 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
GNE-205ENST00000539815 SPRR1AP35321 89 aa4.13□□□□□ -1.75
GNE-205ENST00000539815 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
GNE-205ENST00000539815 IGFL1Q6UW32 110 aa4.1□□□□□ -1.75
GNE-205ENST00000539815 K7ERS5 55 aa4.09□□□□□ -1.75
GNE-205ENST00000539815 A0A087WSZ3 146 aa4.09□□□□□ -1.75
GNE-205ENST00000539815 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
GNE-205ENST00000539815 DNAH8Q96JB1 4490 aa4.08□□□□□ -1.76
GNE-205ENST00000539815 Q5W150 140 aa4.08□□□□□ -1.76
GNE-205ENST00000539815 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
GNE-205ENST00000539815 KRTAP4-16G5E9R7 235 aaPredicted RBP4.04□□□□□ -1.76
GNE-205ENST00000539815 SPRR1BP22528 89 aa4.04□□□□□ -1.76
GNE-205ENST00000539815 MMP24-AS1A0A0U1RRL7 71 aa4.03□□□□□ -1.76
GNE-205ENST00000539815 ACYP2P14621 99 aa4.02□□□□□ -1.77
GNE-205ENST00000539815 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
GNE-205ENST00000539815 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
GNE-205ENST00000539815 MT1HP80294 61 aa3.99□□□□□ -1.77
GNE-205ENST00000539815 FAT4Q6V0I7 4981 aa3.98□□□□□ -1.77
GNE-205ENST00000539815 H0YAA0 97 aa3.96□□□□□ -1.78
GNE-205ENST00000539815 TP53AIP1Q9HCN2 124 aa3.96□□□□□ -1.78
GNE-205ENST00000539815 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.78
GNE-205ENST00000539815 A0A1B0GVX0 72 aa3.94□□□□□ -1.78
GNE-205ENST00000539815 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
GNE-205ENST00000539815 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
GNE-205ENST00000539815 IGKV2-30P06310 120 aa3.91□□□□□ -1.78
GNE-205ENST00000539815 LPAP08519 4548 aa3.89□□□□□ -1.79
GNE-205ENST00000539815 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
GNE-205ENST00000539815 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
GNE-205ENST00000539815 MRPL34Q9BQ48 92 aaKnown RBP3.85□□□□□ -1.79
GNE-205ENST00000539815 MUC2Q02817 5179 aa3.8□□□□□ -1.8
GNE-205ENST00000539815 TNXBP22105 4242 aa3.8□□□□□ -1.8
GNE-205ENST00000539815 A0A1B0GU33 70 aa3.78□□□□□ -1.8
GNE-205ENST00000539815 H1FX-AS1Q4G0G2 97 aa3.75□□□□□ -1.81
GNE-205ENST00000539815 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
GNE-205ENST00000539815 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
GNE-205ENST00000539815 MT2AP02795 61 aa3.7□□□□□ -1.82
GNE-205ENST00000539815 S4R3F8 94 aa3.67□□□□□ -1.82
GNE-205ENST00000539815 KRTAP19-2Q3LHN2 52 aa3.65□□□□□ -1.83
GNE-205ENST00000539815 PLAC4Q8WY50 150 aa3.65□□□□□ -1.83
GNE-205ENST00000539815 A0A0D9SG42 100 aa3.64□□□□□ -1.83
GNE-205ENST00000539815 MT1FP04733 61 aa3.64□□□□□ -1.83
GNE-205ENST00000539815 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
GNE-205ENST00000539815 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
GNE-205ENST00000539815 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
GNE-205ENST00000539815 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.84
GNE-205ENST00000539815 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.84
GNE-205ENST00000539815 R4GN34 69 aa3.58□□□□□ -1.84
GNE-205ENST00000539815 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
GNE-205ENST00000539815 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
GNE-205ENST00000539815 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
GNE-205ENST00000539815 MUC17Q685J3 4493 aa3.51□□□□□ -1.85
GNE-205ENST00000539815 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
GNE-205ENST00000539815 USH2AO75445 5202 aa3.47□□□□□ -1.85
GNE-205ENST00000539815 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
GNE-205ENST00000539815 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.86
GNE-205ENST00000539815 SPRR2EP22531 72 aa3.44□□□□□ -1.86
GNE-205ENST00000539815 SPRR2BP35325 72 aa3.44□□□□□ -1.86
GNE-205ENST00000539815 SPRR2AP35326 72 aa3.44□□□□□ -1.86
GNE-205ENST00000539815 M0QZ58 72 aa3.43□□□□□ -1.86
GNE-205ENST00000539815 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
GNE-205ENST00000539815 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
GNE-205ENST00000539815 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
GNE-205ENST00000539815 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
GNE-205ENST00000539815 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
GNE-205ENST00000539815 NEBP20929 6669 aa3.39□□□□□ -1.87
GNE-205ENST00000539815 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
GNE-205ENST00000539815 KMT2DO14686 5537 aa3.38□□□□□ -1.87
GNE-205ENST00000539815 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
GNE-205ENST00000539815 SPRR2DP22532 72 aa3.33□□□□□ -1.88
GNE-205ENST00000539815 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
GNE-205ENST00000539815 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
GNE-205ENST00000539815 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
GNE-205ENST00000539815 INE1O15225 51 aa3.27□□□□□ -1.89
GNE-205ENST00000539815 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
GNE-205ENST00000539815 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
GNE-205ENST00000539815 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms