RNA–Protein interactions for RNA: ENST00000539743.5

CPT1A-205, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CPT1A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-205ENST00000539743 KRTAP13-4Q3LI77 160 aa6.53□□□□□ -1.36
CPT1A-205ENST00000539743 PKHD1P08F94 4074 aa6.5□□□□□ -1.37
CPT1A-205ENST00000539743 C9orf92A6NGG3 77 aa6.47□□□□□ -1.37
CPT1A-205ENST00000539743 S4R3F8 94 aa6.47□□□□□ -1.37
CPT1A-205ENST00000539743 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
CPT1A-205ENST00000539743 DYNC1H1Q14204 4646 aaKnown RBP6.45□□□□□ -1.38
CPT1A-205ENST00000539743 KRTAP3-3Q9BYR6 98 aa6.42□□□□□ -1.38
CPT1A-205ENST00000539743 A0A1B0GVY2 172 aa6.41□□□□□ -1.38
CPT1A-205ENST00000539743 XP32Q5T750 250 aa6.39□□□□□ -1.39
CPT1A-205ENST00000539743 APOBP04114 4563 aaKnown RBP6.39□□□□□ -1.39
CPT1A-205ENST00000539743 SMR3BP02814 79 aaPredicted RBP6.38□□□□□ -1.39
CPT1A-205ENST00000539743 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
CPT1A-205ENST00000539743 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
CPT1A-205ENST00000539743 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
CPT1A-205ENST00000539743 KRTAP10-4P60372 401 aaPredicted RBP6.35□□□□□ -1.39
CPT1A-205ENST00000539743 PKHD1L1Q86WI1 4243 aa6.34□□□□□ -1.39
CPT1A-205ENST00000539743 FAT1Q14517 4588 aa6.34□□□□□ -1.39
CPT1A-205ENST00000539743 RYR2Q92736 4967 aa6.33□□□□□ -1.4
CPT1A-205ENST00000539743 KRTAP12-1P59990 96 aa6.32□□□□□ -1.4
CPT1A-205ENST00000539743 KMT2CQ8NEZ4 4911 aaKnown RBP6.25□□□□□ -1.41
CPT1A-205ENST00000539743 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
CPT1A-205ENST00000539743 M0QZ58 72 aa6.19□□□□□ -1.42
CPT1A-205ENST00000539743 TNXBP22105 4242 aa6.14□□□□□ -1.43
CPT1A-205ENST00000539743 HSPG2P98160 4391 aa6.13□□□□□ -1.43
CPT1A-205ENST00000539743 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
CPT1A-205ENST00000539743 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
CPT1A-205ENST00000539743 KRTAP10-8P60410 259 aa6.1□□□□□ -1.43
CPT1A-205ENST00000539743 Q5VSD8 79 aa6.1□□□□□ -1.43
CPT1A-205ENST00000539743 LRP1Q07954 4544 aaKnown RBP6.08□□□□□ -1.44
CPT1A-205ENST00000539743 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
CPT1A-205ENST00000539743 RYR3Q15413 4870 aa6.07□□□□□ -1.44
CPT1A-205ENST00000539743 RYR1P21817 5038 aa6.05□□□□□ -1.44
CPT1A-205ENST00000539743 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
CPT1A-205ENST00000539743 MYCBP2O75592 4640 aa5.94□□□□□ -1.46
CPT1A-205ENST00000539743 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
CPT1A-205ENST00000539743 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
CPT1A-205ENST00000539743 LCE2DQ5TA82 110 aaPredicted RBP5.92□□□□□ -1.46
CPT1A-205ENST00000539743 KIAA1109Q2LD37 5005 aa5.91□□□□□ -1.46
CPT1A-205ENST00000539743 R4GN34 69 aa5.88□□□□□ -1.47
CPT1A-205ENST00000539743 EPPK1P58107 5090 aaKnown RBP5.86□□□□□ -1.47
CPT1A-205ENST00000539743 LPAP08519 4548 aa5.79□□□□□ -1.48
CPT1A-205ENST00000539743 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
CPT1A-205ENST00000539743 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
CPT1A-205ENST00000539743 LRP2P98164 4655 aa5.71□□□□□ -1.49
CPT1A-205ENST00000539743 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
CPT1A-205ENST00000539743 LCE2AQ5TA79 106 aaPredicted RBP5.69□□□□□ -1.5
CPT1A-205ENST00000539743 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
CPT1A-205ENST00000539743 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
CPT1A-205ENST00000539743 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
CPT1A-205ENST00000539743 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
CPT1A-205ENST00000539743 HERC2O95714 4834 aa5.62□□□□□ -1.51
CPT1A-205ENST00000539743 PCLOQ9Y6V0 5065 aa5.54□□□□□ -1.52
CPT1A-205ENST00000539743 TNP1P09430 55 aa5.53□□□□□ -1.52
CPT1A-205ENST00000539743 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
CPT1A-205ENST00000539743 INE1O15225 51 aa5.5□□□□□ -1.53
CPT1A-205ENST00000539743 KRTAP4-1Q9BYQ7 146 aa5.45□□□□□ -1.54
CPT1A-205ENST00000539743 LCE2BO14633 110 aa5.44□□□□□ -1.54
CPT1A-205ENST00000539743 KRTAP19-2Q3LHN2 52 aa5.37□□□□□ -1.55
CPT1A-205ENST00000539743 MUC2Q02817 5179 aa5.28□□□□□ -1.56
CPT1A-205ENST00000539743 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
CPT1A-205ENST00000539743 HMCN2Q8NDA2 5059 aa5.25□□□□□ -1.57
CPT1A-205ENST00000539743 HERC1Q15751 4861 aa5.23□□□□□ -1.57
CPT1A-205ENST00000539743 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
CPT1A-205ENST00000539743 UBR4Q5T4S7 5183 aa5.06□□□□□ -1.6
CPT1A-205ENST00000539743 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
CPT1A-205ENST00000539743 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
CPT1A-205ENST00000539743 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
CPT1A-205ENST00000539743 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
CPT1A-205ENST00000539743 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
CPT1A-205ENST00000539743 MT1HP80294 61 aa4.96□□□□□ -1.62
CPT1A-205ENST00000539743 M0R2T5 61 aa4.94□□□□□ -1.62
CPT1A-205ENST00000539743 KRTAP10-12P60413 245 aa4.9□□□□□ -1.62
CPT1A-205ENST00000539743 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
CPT1A-205ENST00000539743 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
CPT1A-205ENST00000539743 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
CPT1A-205ENST00000539743 MT2AP02795 61 aa4.85□□□□□ -1.63
CPT1A-205ENST00000539743 MT1FP04733 61 aa4.84□□□□□ -1.63
CPT1A-205ENST00000539743 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
CPT1A-205ENST00000539743 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
CPT1A-205ENST00000539743 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
CPT1A-205ENST00000539743 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
CPT1A-205ENST00000539743 MT1BP07438 61 aa4.67□□□□□ -1.66
CPT1A-205ENST00000539743 MT1XP80297 61 aa4.66□□□□□ -1.66
CPT1A-205ENST00000539743 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
CPT1A-205ENST00000539743 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
CPT1A-205ENST00000539743 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
CPT1A-205ENST00000539743 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
CPT1A-205ENST00000539743 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
CPT1A-205ENST00000539743 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
CPT1A-205ENST00000539743 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
CPT1A-205ENST00000539743 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
CPT1A-205ENST00000539743 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
CPT1A-205ENST00000539743 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
CPT1A-205ENST00000539743 USH2AO75445 5202 aa4.35□□□□□ -1.71
CPT1A-205ENST00000539743 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
CPT1A-205ENST00000539743 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
CPT1A-205ENST00000539743 KMT2DO14686 5537 aa4.3□□□□□ -1.72
CPT1A-205ENST00000539743 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
CPT1A-205ENST00000539743 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
CPT1A-205ENST00000539743 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms