RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
CIT-210ENST00000539413 J3QR89 54 aa7.06□□□□□ -1.28
CIT-210ENST00000539413 KLKP1Q107X0 134 aa7.05□□□□□ -1.28
CIT-210ENST00000539413 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
CIT-210ENST00000539413 MP68P56378 58 aa7.03□□□□□ -1.28
CIT-210ENST00000539413 MT1BP07438 61 aa7.02□□□□□ -1.29
CIT-210ENST00000539413 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
CIT-210ENST00000539413 NDUFC1O43677 76 aa7□□□□□ -1.29
CIT-210ENST00000539413 A8MUN3 132 aa6.99□□□□□ -1.29
CIT-210ENST00000539413 Q5VV11 94 aa6.99□□□□□ -1.29
CIT-210ENST00000539413 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
CIT-210ENST00000539413 IMUPQ9GZP8 106 aa6.97□□□□□ -1.29
CIT-210ENST00000539413 SCGB1A1P11684 91 aa6.93□□□□□ -1.3
CIT-210ENST00000539413 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
CIT-210ENST00000539413 H0YAA0 97 aa6.92□□□□□ -1.3
CIT-210ENST00000539413 H3BPC8 53 aa6.92□□□□□ -1.3
CIT-210ENST00000539413 A6NN06 94 aa6.9□□□□□ -1.3
CIT-210ENST00000539413 ADM2Q7Z4H4 148 aa6.87□□□□□ -1.31
CIT-210ENST00000539413 MT-ATP8P03928 68 aa6.85□□□□□ -1.31
CIT-210ENST00000539413 DMAC1Q96GE9 116 aa6.84□□□□□ -1.31
CIT-210ENST00000539413 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
CIT-210ENST00000539413 K7ERU9 68 aa6.82□□□□□ -1.32
CIT-210ENST00000539413 KRTAP6-3Q3LI67 103 aa6.81□□□□□ -1.32
CIT-210ENST00000539413 TRAV7A0A075B6U4 112 aa6.75□□□□□ -1.33
CIT-210ENST00000539413 SMIM20Q8N5G0 67 aa6.74□□□□□ -1.33
CIT-210ENST00000539413 P0C880 135 aa6.73□□□□□ -1.33
CIT-210ENST00000539413 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
CIT-210ENST00000539413 R4GN34 69 aa6.68□□□□□ -1.34
CIT-210ENST00000539413 ACYP2P14621 99 aa6.67□□□□□ -1.34
CIT-210ENST00000539413 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
CIT-210ENST00000539413 M0QZ58 72 aa6.64□□□□□ -1.35
CIT-210ENST00000539413 SNURFQ9Y675 71 aa6.63□□□□□ -1.35
CIT-210ENST00000539413 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
CIT-210ENST00000539413 MT1XP80297 61 aa6.59□□□□□ -1.35
CIT-210ENST00000539413 SPTSSBQ8NFR3 76 aa6.57□□□□□ -1.36
CIT-210ENST00000539413 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
CIT-210ENST00000539413 CHKB-CPT1BH3BT56 60 aa6.55□□□□□ -1.36
CIT-210ENST00000539413 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
CIT-210ENST00000539413 NEBP20929 6669 aa6.54□□□□□ -1.36
CIT-210ENST00000539413 SERP2Q8N6R1 65 aa6.54□□□□□ -1.36
CIT-210ENST00000539413 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
CIT-210ENST00000539413 SPANXA2-OT1Q8N9U9 137 aa6.51□□□□□ -1.37
CIT-210ENST00000539413 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
CIT-210ENST00000539413 KMT2DO14686 5537 aa6.42□□□□□ -1.38
CIT-210ENST00000539413 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
CIT-210ENST00000539413 COX7CP15954 63 aa6.35□□□□□ -1.39
CIT-210ENST00000539413 COA5Q86WW8 74 aa6.35□□□□□ -1.39
CIT-210ENST00000539413 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
CIT-210ENST00000539413 KRTAP8-1Q8IUC2 63 aa6.34□□□□□ -1.39
CIT-210ENST00000539413 MDN1Q9NU22 5596 aa6.34□□□□□ -1.39
CIT-210ENST00000539413 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
CIT-210ENST00000539413 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
CIT-210ENST00000539413 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
CIT-210ENST00000539413 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
CIT-210ENST00000539413 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
CIT-210ENST00000539413 CYSTM1Q9H1C7 97 aa6.28□□□□□ -1.4
CIT-210ENST00000539413 H7BZZ5 65 aa6.26□□□□□ -1.41
CIT-210ENST00000539413 SPRR2EP22531 72 aa6.25□□□□□ -1.41
CIT-210ENST00000539413 SPRR2BP35325 72 aa6.25□□□□□ -1.41
CIT-210ENST00000539413 SPRR2AP35326 72 aa6.25□□□□□ -1.41
CIT-210ENST00000539413 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
CIT-210ENST00000539413 SEC61GP60059 68 aa6.19□□□□□ -1.42
CIT-210ENST00000539413 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
CIT-210ENST00000539413 LCE1AQ5T7P2 110 aa6.18□□□□□ -1.42
CIT-210ENST00000539413 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.42
CIT-210ENST00000539413 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
CIT-210ENST00000539413 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
CIT-210ENST00000539413 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
CIT-210ENST00000539413 SPATA8Q6RVD6 105 aa6.12□□□□□ -1.43
CIT-210ENST00000539413 A0A0D9SG42 100 aa6.11□□□□□ -1.43
CIT-210ENST00000539413 A0A1B0GU33 70 aa6.1□□□□□ -1.43
CIT-210ENST00000539413 CCDC179H3BU77 68 aa6.05□□□□□ -1.44
CIT-210ENST00000539413 SPRR2DP22532 72 aa6.04□□□□□ -1.44
CIT-210ENST00000539413 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
CIT-210ENST00000539413 A0A1B0GU69 56 aa6.02□□□□□ -1.45
CIT-210ENST00000539413 KRTAP12-1P59990 96 aa6□□□□□ -1.45
CIT-210ENST00000539413 KRTAP2-2Q9BYT5 123 aa5.94□□□□□ -1.46
CIT-210ENST00000539413 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
CIT-210ENST00000539413 ATP5EP56381 51 aaPredicted RBP5.92□□□□□ -1.46
CIT-210ENST00000539413 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
CIT-210ENST00000539413 A8MU10 97 aa5.91□□□□□ -1.46
CIT-210ENST00000539413 KRTAP19-7Q3SYF9 63 aa5.89□□□□□ -1.47
CIT-210ENST00000539413 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
CIT-210ENST00000539413 MT1EP04732 61 aa5.83□□□□□ -1.48
CIT-210ENST00000539413 PRR15LQ9BU68 103 aa5.83□□□□□ -1.48
CIT-210ENST00000539413 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
CIT-210ENST00000539413 TMEM258P61165 79 aa5.79□□□□□ -1.48
CIT-210ENST00000539413 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
CIT-210ENST00000539413 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
CIT-210ENST00000539413 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
CIT-210ENST00000539413 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
CIT-210ENST00000539413 TNP1P09430 55 aa5.68□□□□□ -1.5
CIT-210ENST00000539413 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
CIT-210ENST00000539413 DSTQ03001 7570 aaKnown RBP5.65□□□□□ -1.51
CIT-210ENST00000539413 UQCR11O14957 56 aa5.64□□□□□ -1.51
CIT-210ENST00000539413 MT1GP13640 62 aa5.63□□□□□ -1.51
CIT-210ENST00000539413 MT1LQ93083 61 aa5.58□□□□□ -1.52
CIT-210ENST00000539413 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
CIT-210ENST00000539413 MT1MQ8N339 61 aa5.55□□□□□ -1.52
CIT-210ENST00000539413 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms