RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 A6NN06 94 aa4.61□□□□□ -1.67
UBE3B-208ENST00000538070 HSPG2P98160 4391 aa4.59□□□□□ -1.67
UBE3B-208ENST00000538070 SPATA8Q6RVD6 105 aa4.59□□□□□ -1.67
UBE3B-208ENST00000538070 RYR1P21817 5038 aa4.59□□□□□ -1.67
UBE3B-208ENST00000538070 KRTAP10-8P60410 259 aa4.58□□□□□ -1.68
UBE3B-208ENST00000538070 COX6B2Q6YFQ2 88 aa4.57□□□□□ -1.68
UBE3B-208ENST00000538070 A0A1B0GU33 70 aa4.56□□□□□ -1.68
UBE3B-208ENST00000538070 XP32Q5T750 250 aa4.56□□□□□ -1.68
UBE3B-208ENST00000538070 A0A0D9SG42 100 aa4.55□□□□□ -1.68
UBE3B-208ENST00000538070 EPPK1P58107 5090 aaKnown RBP4.54□□□□□ -1.68
UBE3B-208ENST00000538070 RPL37P61927 97 aaKnown RBP4.52□□□□□ -1.69
UBE3B-208ENST00000538070 TNXBP22105 4242 aa4.51□□□□□ -1.69
UBE3B-208ENST00000538070 CSAG1Q6PB30 78 aa4.51□□□□□ -1.69
UBE3B-208ENST00000538070 KRTAP4-5Q9BYR2 181 aa4.5□□□□□ -1.69
UBE3B-208ENST00000538070 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
UBE3B-208ENST00000538070 H0YAA0 97 aa4.5□□□□□ -1.69
UBE3B-208ENST00000538070 LRP2P98164 4655 aa4.5□□□□□ -1.69
UBE3B-208ENST00000538070 H1FX-AS1Q4G0G2 97 aa4.49□□□□□ -1.69
UBE3B-208ENST00000538070 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
UBE3B-208ENST00000538070 S4R3F8 94 aa4.48□□□□□ -1.69
UBE3B-208ENST00000538070 LPAP08519 4548 aa4.47□□□□□ -1.69
UBE3B-208ENST00000538070 ABCA13Q86UQ4 5058 aa4.43□□□□□ -1.7
UBE3B-208ENST00000538070 K7ERS5 55 aa4.43□□□□□ -1.7
UBE3B-208ENST00000538070 P0C880 135 aa4.4□□□□□ -1.7
UBE3B-208ENST00000538070 LUZP6Q538Z0 58 aa4.4□□□□□ -1.7
UBE3B-208ENST00000538070 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
UBE3B-208ENST00000538070 SPINT4Q6UDR6 99 aa4.38□□□□□ -1.71
UBE3B-208ENST00000538070 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
UBE3B-208ENST00000538070 ROMO1P60602 79 aa4.37□□□□□ -1.71
UBE3B-208ENST00000538070 KRTAP13-4Q3LI77 160 aa4.36□□□□□ -1.71
UBE3B-208ENST00000538070 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
UBE3B-208ENST00000538070 HERC2O95714 4834 aa4.32□□□□□ -1.72
UBE3B-208ENST00000538070 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
UBE3B-208ENST00000538070 SEC61BP60468 96 aaKnown RBP4.32□□□□□ -1.72
UBE3B-208ENST00000538070 KRTAP3-2Q9BYR7 98 aa4.31□□□□□ -1.72
UBE3B-208ENST00000538070 MUC2Q02817 5179 aa4.29□□□□□ -1.72
UBE3B-208ENST00000538070 M0QZ58 72 aa4.25□□□□□ -1.73
UBE3B-208ENST00000538070 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
UBE3B-208ENST00000538070 KRTAP12-2P59991 146 aa4.23□□□□□ -1.73
UBE3B-208ENST00000538070 R4GN34 69 aa4.23□□□□□ -1.73
UBE3B-208ENST00000538070 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
UBE3B-208ENST00000538070 KRTAP4-1Q9BYQ7 146 aa4.22□□□□□ -1.73
UBE3B-208ENST00000538070 HERC1Q15751 4861 aa4.19□□□□□ -1.74
UBE3B-208ENST00000538070 LORP23490 312 aaPredicted RBP4.15□□□□□ -1.74
UBE3B-208ENST00000538070 KRTAP12-1P59990 96 aa4.15□□□□□ -1.74
UBE3B-208ENST00000538070 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.75
UBE3B-208ENST00000538070 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
UBE3B-208ENST00000538070 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
UBE3B-208ENST00000538070 M0R2T5 61 aa4.07□□□□□ -1.76
UBE3B-208ENST00000538070 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
UBE3B-208ENST00000538070 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
UBE3B-208ENST00000538070 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
UBE3B-208ENST00000538070 HMCN2Q8NDA2 5059 aa3.95□□□□□ -1.78
UBE3B-208ENST00000538070 KRTAP9-6A0A140TA67 174 aa3.94□□□□□ -1.78
UBE3B-208ENST00000538070 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
UBE3B-208ENST00000538070 FLGP20930 4061 aaPredicted RBP3.93□□□□□ -1.78
UBE3B-208ENST00000538070 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
UBE3B-208ENST00000538070 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
UBE3B-208ENST00000538070 PLAC4Q8WY50 150 aa3.82□□□□□ -1.8
UBE3B-208ENST00000538070 LCE2CQ5TA81 110 aa3.81□□□□□ -1.8
UBE3B-208ENST00000538070 TNP1P09430 55 aa3.78□□□□□ -1.8
UBE3B-208ENST00000538070 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
UBE3B-208ENST00000538070 MT1HP80294 61 aa3.77□□□□□ -1.81
UBE3B-208ENST00000538070 MT1FP04733 61 aa3.73□□□□□ -1.81
UBE3B-208ENST00000538070 MT2AP02795 61 aa3.71□□□□□ -1.82
UBE3B-208ENST00000538070 KRTAP19-1Q8IUB9 90 aa3.71□□□□□ -1.82
UBE3B-208ENST00000538070 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
UBE3B-208ENST00000538070 CRCT1Q9UGL9 99 aa3.68□□□□□ -1.82
UBE3B-208ENST00000538070 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
UBE3B-208ENST00000538070 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
UBE3B-208ENST00000538070 KRTAP9-8Q9BYQ0 159 aa3.63□□□□□ -1.83
UBE3B-208ENST00000538070 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
UBE3B-208ENST00000538070 USH2AO75445 5202 aa3.62□□□□□ -1.83
UBE3B-208ENST00000538070 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
UBE3B-208ENST00000538070 LCE2AQ5TA79 106 aaPredicted RBP3.59□□□□□ -1.84
UBE3B-208ENST00000538070 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
UBE3B-208ENST00000538070 MT1BP07438 61 aa3.52□□□□□ -1.85
UBE3B-208ENST00000538070 KMT2DO14686 5537 aa3.5□□□□□ -1.85
UBE3B-208ENST00000538070 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
UBE3B-208ENST00000538070 MT1XP80297 61 aa3.48□□□□□ -1.85
UBE3B-208ENST00000538070 KRTAP10-5P60370 271 aa3.48□□□□□ -1.85
UBE3B-208ENST00000538070 KRTAP9-3Q9BYQ3 159 aa3.47□□□□□ -1.85
UBE3B-208ENST00000538070 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
UBE3B-208ENST00000538070 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
UBE3B-208ENST00000538070 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
UBE3B-208ENST00000538070 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
UBE3B-208ENST00000538070 LCE2BO14633 110 aa3.42□□□□□ -1.86
UBE3B-208ENST00000538070 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
UBE3B-208ENST00000538070 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
UBE3B-208ENST00000538070 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
UBE3B-208ENST00000538070 KRTAP4-8Q9BYQ9 185 aa3.35□□□□□ -1.87
UBE3B-208ENST00000538070 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
UBE3B-208ENST00000538070 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
UBE3B-208ENST00000538070 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.89
UBE3B-208ENST00000538070 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
UBE3B-208ENST00000538070 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
UBE3B-208ENST00000538070 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
UBE3B-208ENST00000538070 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
UBE3B-208ENST00000538070 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
UBE3B-208ENST00000538070 INE1O15225 51 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms