RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 HSPG2P98160 4391 aa6.29□□□□□ -1.4
CPSF7-218ENST00000537641 TNXBP22105 4242 aa6.28□□□□□ -1.4
CPSF7-218ENST00000537641 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
CPSF7-218ENST00000537641 H3BS24 57 aa6.28□□□□□ -1.4
CPSF7-218ENST00000537641 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
CPSF7-218ENST00000537641 KRTAP3-3Q9BYR6 98 aa6.25□□□□□ -1.41
CPSF7-218ENST00000537641 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
CPSF7-218ENST00000537641 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
CPSF7-218ENST00000537641 RYR3Q15413 4870 aa6.21□□□□□ -1.42
CPSF7-218ENST00000537641 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
CPSF7-218ENST00000537641 S4R3F8 94 aa6.21□□□□□ -1.42
CPSF7-218ENST00000537641 RYR1P21817 5038 aa6.21□□□□□ -1.42
CPSF7-218ENST00000537641 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
CPSF7-218ENST00000537641 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
CPSF7-218ENST00000537641 CRIPTQ9P021 101 aa6.18□□□□□ -1.42
CPSF7-218ENST00000537641 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
CPSF7-218ENST00000537641 XP32Q5T750 250 aa6.14□□□□□ -1.43
CPSF7-218ENST00000537641 A0A0D9SG42 100 aa6.13□□□□□ -1.43
CPSF7-218ENST00000537641 DMBT1Q9UGM3 2413 aaPredicted RBP6.13□□□□□ -1.43
CPSF7-218ENST00000537641 TPRXLQ17RH7 258 aa6.09□□□□□ -1.43
CPSF7-218ENST00000537641 P0C880 135 aa6.08□□□□□ -1.44
CPSF7-218ENST00000537641 KIAA1109Q2LD37 5005 aa6.08□□□□□ -1.44
CPSF7-218ENST00000537641 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
CPSF7-218ENST00000537641 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
CPSF7-218ENST00000537641 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
CPSF7-218ENST00000537641 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
CPSF7-218ENST00000537641 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
CPSF7-218ENST00000537641 EPPK1P58107 5090 aaKnown RBP5.98□□□□□ -1.45
CPSF7-218ENST00000537641 M0QZ58 72 aa5.98□□□□□ -1.45
CPSF7-218ENST00000537641 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.45
CPSF7-218ENST00000537641 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
CPSF7-218ENST00000537641 KRTAP4-5Q9BYR2 181 aa5.91□□□□□ -1.46
CPSF7-218ENST00000537641 LRP2P98164 4655 aa5.83□□□□□ -1.48
CPSF7-218ENST00000537641 ABCA13Q86UQ4 5058 aa5.8□□□□□ -1.48
CPSF7-218ENST00000537641 J3QL48 77 aa5.78□□□□□ -1.48
CPSF7-218ENST00000537641 SEC61BP60468 96 aaKnown RBP5.78□□□□□ -1.48
CPSF7-218ENST00000537641 LPAP08519 4548 aa5.78□□□□□ -1.48
CPSF7-218ENST00000537641 NDUFAF8A1L188 74 aa5.77□□□□□ -1.49
CPSF7-218ENST00000537641 R4GN34 69 aa5.74□□□□□ -1.49
CPSF7-218ENST00000537641 HERC2O95714 4834 aa5.66□□□□□ -1.5
CPSF7-218ENST00000537641 MUC17Q685J3 4493 aa5.65□□□□□ -1.51
CPSF7-218ENST00000537641 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
CPSF7-218ENST00000537641 BIRC6Q9NR09 4857 aa5.61□□□□□ -1.51
CPSF7-218ENST00000537641 PLAC4Q8WY50 150 aa5.59□□□□□ -1.51
CPSF7-218ENST00000537641 LORP23490 312 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-218ENST00000537641 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
CPSF7-218ENST00000537641 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
CPSF7-218ENST00000537641 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
CPSF7-218ENST00000537641 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-218ENST00000537641 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
CPSF7-218ENST00000537641 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
CPSF7-218ENST00000537641 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
CPSF7-218ENST00000537641 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
CPSF7-218ENST00000537641 HERC1Q15751 4861 aa5.35□□□□□ -1.55
CPSF7-218ENST00000537641 MUC2Q02817 5179 aa5.33□□□□□ -1.56
CPSF7-218ENST00000537641 TNP1P09430 55 aa5.33□□□□□ -1.56
CPSF7-218ENST00000537641 LCE2CQ5TA81 110 aa5.28□□□□□ -1.56
CPSF7-218ENST00000537641 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
CPSF7-218ENST00000537641 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
CPSF7-218ENST00000537641 MT1HP80294 61 aa5.14□□□□□ -1.59
CPSF7-218ENST00000537641 M0R2T5 61 aa5.13□□□□□ -1.59
CPSF7-218ENST00000537641 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
CPSF7-218ENST00000537641 RNF213Q63HN8 5207 aa5.13□□□□□ -1.59
CPSF7-218ENST00000537641 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
CPSF7-218ENST00000537641 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
CPSF7-218ENST00000537641 KRTAP19-1Q8IUB9 90 aa5.06□□□□□ -1.6
CPSF7-218ENST00000537641 LCE2BO14633 110 aa5.04□□□□□ -1.6
CPSF7-218ENST00000537641 MT2AP02795 61 aa5.03□□□□□ -1.6
CPSF7-218ENST00000537641 MT1FP04733 61 aa5.01□□□□□ -1.61
CPSF7-218ENST00000537641 KRTAP10-10P60014 251 aa5□□□□□ -1.61
CPSF7-218ENST00000537641 KRTAP9-8Q9BYQ0 159 aa5□□□□□ -1.61
CPSF7-218ENST00000537641 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
CPSF7-218ENST00000537641 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
CPSF7-218ENST00000537641 KRTAP8-1Q8IUC2 63 aa4.92□□□□□ -1.62
CPSF7-218ENST00000537641 MT1BP07438 61 aa4.82□□□□□ -1.64
CPSF7-218ENST00000537641 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
CPSF7-218ENST00000537641 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
CPSF7-218ENST00000537641 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
CPSF7-218ENST00000537641 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
CPSF7-218ENST00000537641 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
CPSF7-218ENST00000537641 INE1O15225 51 aa4.77□□□□□ -1.65
CPSF7-218ENST00000537641 MT1XP80297 61 aa4.77□□□□□ -1.65
CPSF7-218ENST00000537641 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
CPSF7-218ENST00000537641 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
CPSF7-218ENST00000537641 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-218ENST00000537641 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
CPSF7-218ENST00000537641 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
CPSF7-218ENST00000537641 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
CPSF7-218ENST00000537641 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
CPSF7-218ENST00000537641 USH2AO75445 5202 aa4.4□□□□□ -1.71
CPSF7-218ENST00000537641 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
CPSF7-218ENST00000537641 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
CPSF7-218ENST00000537641 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
CPSF7-218ENST00000537641 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
CPSF7-218ENST00000537641 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
CPSF7-218ENST00000537641 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
CPSF7-218ENST00000537641 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
CPSF7-218ENST00000537641 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
CPSF7-218ENST00000537641 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
CPSF7-218ENST00000537641 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms