RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TRBV7-4A0A0J9YYF1 115 aa4.01□□□□□ -1.77
CPSF7-217ENST00000537162 RBM3P98179 157 aaKnown RBP4.01□□□□□ -1.77
CPSF7-217ENST00000537162 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
CPSF7-217ENST00000537162 WFDC13Q8IUB5 93 aa4.01□□□□□ -1.77
CPSF7-217ENST00000537162 DSCR8Q96T75 97 aa4□□□□□ -1.77
CPSF7-217ENST00000537162 FAM236AA0A1B0GUQ0 79 aa3.99□□□□□ -1.77
CPSF7-217ENST00000537162 FAM236BA0A1B0GV22 79 aa3.99□□□□□ -1.77
CPSF7-217ENST00000537162 F8WEM9 126 aa3.99□□□□□ -1.77
CPSF7-217ENST00000537162 Q6JHZ5 121 aa3.99□□□□□ -1.77
CPSF7-217ENST00000537162 CCKP06307 115 aa3.98□□□□□ -1.77
CPSF7-217ENST00000537162 ATP5EP2Q5VTU8 51 aa3.98□□□□□ -1.77
CPSF7-217ENST00000537162 Q6ZQT0 140 aa3.98□□□□□ -1.77
CPSF7-217ENST00000537162 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
CPSF7-217ENST00000537162 C14orf132Q9NPU4 83 aa3.97□□□□□ -1.77
CPSF7-217ENST00000537162 MT1XP80297 61 aa3.95□□□□□ -1.78
CPSF7-217ENST00000537162 ATOX1O00244 68 aa3.94□□□□□ -1.78
CPSF7-217ENST00000537162 LINC00313P59037 77 aa3.94□□□□□ -1.78
CPSF7-217ENST00000537162 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
CPSF7-217ENST00000537162 H1FX-AS1Q4G0G2 97 aa3.94□□□□□ -1.78
CPSF7-217ENST00000537162 UBL5Q9BZL1 73 aa3.94□□□□□ -1.78
CPSF7-217ENST00000537162 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
CPSF7-217ENST00000537162 UQCRQO14949 82 aa3.9□□□□□ -1.79
CPSF7-217ENST00000537162 CXCL6P80162 114 aa3.9□□□□□ -1.79
CPSF7-217ENST00000537162 SS18L2Q9UHA2 77 aa3.9□□□□□ -1.79
CPSF7-217ENST00000537162 ZCCHC13Q8WW36 166 aaKnown RBP3.89□□□□□ -1.79
CPSF7-217ENST00000537162 HIST1H4AP62805 103 aaKnown RBP3.88□□□□□ -1.79
CPSF7-217ENST00000537162 Q6ZVQ6 151 aa3.88□□□□□ -1.79
CPSF7-217ENST00000537162 IGKV3D-7A0A0C4DH55 119 aa3.87□□□□□ -1.79
CPSF7-217ENST00000537162 COX7CP15954 63 aa3.87□□□□□ -1.79
CPSF7-217ENST00000537162 SMIM20Q8N5G0 67 aa3.87□□□□□ -1.79
CPSF7-217ENST00000537162 J3KT08 172 aa3.86□□□□□ -1.79
CPSF7-217ENST00000537162 NREPQ16612 68 aa3.86□□□□□ -1.79
CPSF7-217ENST00000537162 A0A087WSZ3 146 aa3.85□□□□□ -1.79
CPSF7-217ENST00000537162 CCDC179H3BU77 68 aa3.85□□□□□ -1.79
CPSF7-217ENST00000537162 SERP2Q8N6R1 65 aa3.85□□□□□ -1.79
CPSF7-217ENST00000537162 C5orf47Q569G3 176 aa3.84□□□□□ -1.79
CPSF7-217ENST00000537162 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
CPSF7-217ENST00000537162 BPY2O14599 106 aa3.83□□□□□ -1.8
CPSF7-217ENST00000537162 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
CPSF7-217ENST00000537162 KLKP1Q107X0 134 aa3.82□□□□□ -1.8
CPSF7-217ENST00000537162 LINC00472Q9H8W2 130 aa3.82□□□□□ -1.8
CPSF7-217ENST00000537162 A0A087WVE0 104 aa3.81□□□□□ -1.8
CPSF7-217ENST00000537162 TMEM258P61165 79 aa3.81□□□□□ -1.8
CPSF7-217ENST00000537162 TRAV7A0A075B6U4 112 aa3.8□□□□□ -1.8
CPSF7-217ENST00000537162 IGHV6-1A0A0B4J1U7 121 aa3.78□□□□□ -1.8
CPSF7-217ENST00000537162 NDUFB1O75438 58 aa3.78□□□□□ -1.8
CPSF7-217ENST00000537162 IGKV4-1P06312 121 aa3.78□□□□□ -1.8
CPSF7-217ENST00000537162 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
CPSF7-217ENST00000537162 NDUFC1O43677 76 aa3.77□□□□□ -1.81
CPSF7-217ENST00000537162 PRR15Q8IV56 129 aa3.77□□□□□ -1.81
CPSF7-217ENST00000537162 ATP5EP56381 51 aaPredicted RBP3.76□□□□□ -1.81
CPSF7-217ENST00000537162 DEFB116Q30KQ4 102 aa3.76□□□□□ -1.81
CPSF7-217ENST00000537162 A0A1B0GVX0 72 aa3.75□□□□□ -1.81
CPSF7-217ENST00000537162 C8orf87E5RJ46 101 aa3.75□□□□□ -1.81
CPSF7-217ENST00000537162 K7EQZ3 153 aa3.75□□□□□ -1.81
CPSF7-217ENST00000537162 HCG22E2RYF7 251 aa3.74□□□□□ -1.81
CPSF7-217ENST00000537162 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
CPSF7-217ENST00000537162 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
CPSF7-217ENST00000537162 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
CPSF7-217ENST00000537162 LCA10Q71F78 164 aa3.73□□□□□ -1.81
CPSF7-217ENST00000537162 C20orf197Q8N268 126 aa3.73□□□□□ -1.81
CPSF7-217ENST00000537162 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
CPSF7-217ENST00000537162 MMP24-AS1A0A0U1RRL7 71 aa3.71□□□□□ -1.82
CPSF7-217ENST00000537162 SEC61GP60059 68 aa3.71□□□□□ -1.82
CPSF7-217ENST00000537162 KRTAP10-12P60413 245 aa3.71□□□□□ -1.82
CPSF7-217ENST00000537162 Q8N9L7 120 aa3.7□□□□□ -1.82
CPSF7-217ENST00000537162 TMEM254Q8TBM7 123 aa3.7□□□□□ -1.82
CPSF7-217ENST00000537162 TP53AIP1Q9HCN2 124 aa3.7□□□□□ -1.82
CPSF7-217ENST00000537162 C8orf17Q9NRJ1 99 aa3.7□□□□□ -1.82
CPSF7-217ENST00000537162 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
CPSF7-217ENST00000537162 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
CPSF7-217ENST00000537162 CASC2Q6XLA1 102 aa3.69□□□□□ -1.82
CPSF7-217ENST00000537162 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
CPSF7-217ENST00000537162 SERP1Q9Y6X1 66 aa3.68□□□□□ -1.82
CPSF7-217ENST00000537162 H7BZZ5 65 aa3.67□□□□□ -1.82
CPSF7-217ENST00000537162 MRPL34Q9BQ48 92 aaKnown RBP3.67□□□□□ -1.82
CPSF7-217ENST00000537162 H3BPC8 53 aa3.66□□□□□ -1.82
CPSF7-217ENST00000537162 CYSTM1Q9H1C7 97 aa3.66□□□□□ -1.82
CPSF7-217ENST00000537162 SNURFQ9Y675 71 aa3.66□□□□□ -1.82
CPSF7-217ENST00000537162 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
CPSF7-217ENST00000537162 MP68P56378 58 aa3.64□□□□□ -1.83
CPSF7-217ENST00000537162 CSAG1Q6PB30 78 aa3.64□□□□□ -1.83
CPSF7-217ENST00000537162 CRIPTQ9P021 101 aa3.64□□□□□ -1.83
CPSF7-217ENST00000537162 TRAV22A0A0B4J277 110 aa3.63□□□□□ -1.83
CPSF7-217ENST00000537162 SMIM26A0A096LP01 95 aa3.61□□□□□ -1.83
CPSF7-217ENST00000537162 V9GYY9 64 aa3.61□□□□□ -1.83
CPSF7-217ENST00000537162 C4orf26Q17RF5 130 aa3.59□□□□□ -1.83
CPSF7-217ENST00000537162 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
CPSF7-217ENST00000537162 S4R3F8 94 aa3.59□□□□□ -1.83
CPSF7-217ENST00000537162 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
CPSF7-217ENST00000537162 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
CPSF7-217ENST00000537162 H0Y9P7 68 aa3.57□□□□□ -1.84
CPSF7-217ENST00000537162 NDUFS5O43920 106 aa3.57□□□□□ -1.84
CPSF7-217ENST00000537162 SPANXA2-OT1Q8N9U9 137 aa3.56□□□□□ -1.84
CPSF7-217ENST00000537162 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
CPSF7-217ENST00000537162 LINC00208Q96KT6 92 aa3.55□□□□□ -1.84
CPSF7-217ENST00000537162 CYP4F30PQ9H0H9 118 aa3.55□□□□□ -1.84
CPSF7-217ENST00000537162 MT1EP04732 61 aa3.54□□□□□ -1.84
CPSF7-217ENST00000537162 MT3P25713 68 aa3.54□□□□□ -1.84
CPSF7-217ENST00000537162 C1orf64Q8NEQ6 169 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms