RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
CLSTN3-203ENST00000534830 KRTAP3-3Q9BYR6 98 aa4.52□□□□□ -1.69
CLSTN3-203ENST00000534830 FAM236AA0A1B0GUQ0 79 aa4.51□□□□□ -1.69
CLSTN3-203ENST00000534830 FAM236BA0A1B0GV22 79 aa4.51□□□□□ -1.69
CLSTN3-203ENST00000534830 FAM240AA0A1B0GVK7 77 aa4.48□□□□□ -1.69
CLSTN3-203ENST00000534830 Q5VV11 94 aa4.48□□□□□ -1.69
CLSTN3-203ENST00000534830 SPRR2EP22531 72 aa4.47□□□□□ -1.69
CLSTN3-203ENST00000534830 SPRR2BP35325 72 aa4.47□□□□□ -1.69
CLSTN3-203ENST00000534830 SPRR2AP35326 72 aa4.47□□□□□ -1.69
CLSTN3-203ENST00000534830 KLKP1Q107X0 134 aa4.47□□□□□ -1.69
CLSTN3-203ENST00000534830 CYP4F30PQ9H0H9 118 aa4.47□□□□□ -1.69
CLSTN3-203ENST00000534830 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
CLSTN3-203ENST00000534830 ACYP1P07311 99 aa4.45□□□□□ -1.7
CLSTN3-203ENST00000534830 A0A087WVE0 104 aa4.44□□□□□ -1.7
CLSTN3-203ENST00000534830 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
CLSTN3-203ENST00000534830 TRAV22A0A0B4J277 110 aa4.41□□□□□ -1.7
CLSTN3-203ENST00000534830 LOC101927531A0A1B0GV80 90 aa4.4□□□□□ -1.71
CLSTN3-203ENST00000534830 J3QR89 54 aa4.4□□□□□ -1.71
CLSTN3-203ENST00000534830 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
CLSTN3-203ENST00000534830 LINC00643Q86TS7 51 aa4.39□□□□□ -1.71
CLSTN3-203ENST00000534830 H0YAA0 97 aa4.37□□□□□ -1.71
CLSTN3-203ENST00000534830 K7ERU9 68 aa4.37□□□□□ -1.71
CLSTN3-203ENST00000534830 ATP5EP2Q5VTU8 51 aa4.36□□□□□ -1.71
CLSTN3-203ENST00000534830 IMUPQ9GZP8 106 aa4.36□□□□□ -1.71
CLSTN3-203ENST00000534830 UQCRQO14949 82 aa4.35□□□□□ -1.71
CLSTN3-203ENST00000534830 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
CLSTN3-203ENST00000534830 H0Y9P7 68 aa4.33□□□□□ -1.72
CLSTN3-203ENST00000534830 ATOX1O00244 68 aa4.33□□□□□ -1.72
CLSTN3-203ENST00000534830 MT-ATP8P03928 68 aa4.33□□□□□ -1.72
CLSTN3-203ENST00000534830 SPRR2DP22532 72 aa4.32□□□□□ -1.72
CLSTN3-203ENST00000534830 NDUFC1O43677 76 aa4.31□□□□□ -1.72
CLSTN3-203ENST00000534830 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
CLSTN3-203ENST00000534830 A8MUN3 132 aa4.3□□□□□ -1.72
CLSTN3-203ENST00000534830 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
CLSTN3-203ENST00000534830 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
CLSTN3-203ENST00000534830 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
CLSTN3-203ENST00000534830 MT1XP80297 61 aa4.24□□□□□ -1.73
CLSTN3-203ENST00000534830 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
CLSTN3-203ENST00000534830 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
CLSTN3-203ENST00000534830 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
CLSTN3-203ENST00000534830 MP68P56378 58 aa4.19□□□□□ -1.74
CLSTN3-203ENST00000534830 P0C880 135 aa4.18□□□□□ -1.74
CLSTN3-203ENST00000534830 H3BPC8 53 aa4.17□□□□□ -1.74
CLSTN3-203ENST00000534830 KRTAP3-2Q9BYR7 98 aa4.17□□□□□ -1.74
CLSTN3-203ENST00000534830 SCGB1A1P11684 91 aa4.16□□□□□ -1.74
CLSTN3-203ENST00000534830 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
CLSTN3-203ENST00000534830 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
CLSTN3-203ENST00000534830 DMAC1Q96GE9 116 aa4.16□□□□□ -1.74
CLSTN3-203ENST00000534830 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
CLSTN3-203ENST00000534830 R4GN34 69 aa4.15□□□□□ -1.75
CLSTN3-203ENST00000534830 C20orf197Q8N268 126 aa4.13□□□□□ -1.75
CLSTN3-203ENST00000534830 TRAV7A0A075B6U4 112 aa4.12□□□□□ -1.75
CLSTN3-203ENST00000534830 M0QZ58 72 aa4.11□□□□□ -1.75
CLSTN3-203ENST00000534830 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
CLSTN3-203ENST00000534830 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
CLSTN3-203ENST00000534830 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
CLSTN3-203ENST00000534830 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
CLSTN3-203ENST00000534830 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
CLSTN3-203ENST00000534830 SNURFQ9Y675 71 aa4.05□□□□□ -1.76
CLSTN3-203ENST00000534830 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
CLSTN3-203ENST00000534830 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
CLSTN3-203ENST00000534830 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
CLSTN3-203ENST00000534830 ACYP2P14621 99 aa4.02□□□□□ -1.77
CLSTN3-203ENST00000534830 COX7CP15954 63 aa4.02□□□□□ -1.77
CLSTN3-203ENST00000534830 CYSTM1Q9H1C7 97 aa4.01□□□□□ -1.77
CLSTN3-203ENST00000534830 ANAPC13Q9BS18 74 aa4□□□□□ -1.77
CLSTN3-203ENST00000534830 CCDC179H3BU77 68 aa3.96□□□□□ -1.78
CLSTN3-203ENST00000534830 SPTSSBQ8NFR3 76 aa3.96□□□□□ -1.78
CLSTN3-203ENST00000534830 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
CLSTN3-203ENST00000534830 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
CLSTN3-203ENST00000534830 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
CLSTN3-203ENST00000534830 H7BZZ5 65 aa3.92□□□□□ -1.78
CLSTN3-203ENST00000534830 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
CLSTN3-203ENST00000534830 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
CLSTN3-203ENST00000534830 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
CLSTN3-203ENST00000534830 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
CLSTN3-203ENST00000534830 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
CLSTN3-203ENST00000534830 MT4P47944 62 aa3.84□□□□□ -1.79
CLSTN3-203ENST00000534830 COA5Q86WW8 74 aa3.82□□□□□ -1.8
CLSTN3-203ENST00000534830 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
CLSTN3-203ENST00000534830 PCP4P48539 62 aa3.78□□□□□ -1.8
CLSTN3-203ENST00000534830 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
CLSTN3-203ENST00000534830 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
CLSTN3-203ENST00000534830 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
CLSTN3-203ENST00000534830 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
CLSTN3-203ENST00000534830 TMEM258P61165 79 aa3.76□□□□□ -1.81
CLSTN3-203ENST00000534830 MT1EP04732 61 aa3.75□□□□□ -1.81
CLSTN3-203ENST00000534830 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
CLSTN3-203ENST00000534830 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
CLSTN3-203ENST00000534830 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
CLSTN3-203ENST00000534830 SPATA8Q6RVD6 105 aa3.7□□□□□ -1.82
CLSTN3-203ENST00000534830 A0A0D9SG42 100 aa3.69□□□□□ -1.82
CLSTN3-203ENST00000534830 SERP1Q9Y6X1 66 aa3.69□□□□□ -1.82
CLSTN3-203ENST00000534830 SEC61GP60059 68 aa3.68□□□□□ -1.82
CLSTN3-203ENST00000534830 A0A1B0GU33 70 aa3.67□□□□□ -1.82
CLSTN3-203ENST00000534830 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
CLSTN3-203ENST00000534830 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
CLSTN3-203ENST00000534830 KRTAP4-6Q9BYQ5 205 aa3.65□□□□□ -1.83
CLSTN3-203ENST00000534830 MT1GP13640 62 aa3.64□□□□□ -1.83
CLSTN3-203ENST00000534830 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms