RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 FAM229AH3BQW9 127 aa5.2□□□□□ -1.58
SF3B2-216ENST00000534765 LINC00483Q53H64 154 aa5.19□□□□□ -1.58
SF3B2-216ENST00000534765 LINC00304Q8N9R0 145 aa5.19□□□□□ -1.58
SF3B2-216ENST00000534765 SPRR1BP22528 89 aa5.18□□□□□ -1.58
SF3B2-216ENST00000534765 A0A0D9SG42 100 aa5.17□□□□□ -1.58
SF3B2-216ENST00000534765 ABCA13Q86UQ4 5058 aa5.17□□□□□ -1.58
SF3B2-216ENST00000534765 FAT3Q8TDW7 4589 aa5.17□□□□□ -1.58
SF3B2-216ENST00000534765 A0A1B0GU33 70 aa5.16□□□□□ -1.58
SF3B2-216ENST00000534765 KRTAP10-4P60372 401 aaPredicted RBP5.16□□□□□ -1.58
SF3B2-216ENST00000534765 KRTAP13-2Q52LG2 175 aa5.16□□□□□ -1.58
SF3B2-216ENST00000534765 Q96NJ1 140 aa5.15□□□□□ -1.58
SF3B2-216ENST00000534765 KRTAP1-4P0C5Y4 121 aa5.15□□□□□ -1.59
SF3B2-216ENST00000534765 C20orf166-AS1Q96NR2 134 aa5.14□□□□□ -1.59
SF3B2-216ENST00000534765 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
SF3B2-216ENST00000534765 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
SF3B2-216ENST00000534765 LPAP08519 4548 aa5.1□□□□□ -1.59
SF3B2-216ENST00000534765 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
SF3B2-216ENST00000534765 H0YAA0 97 aa5.08□□□□□ -1.6
SF3B2-216ENST00000534765 TYMSOSQ8TAI1 123 aa5.06□□□□□ -1.6
SF3B2-216ENST00000534765 H1FX-AS1Q4G0G2 97 aa5.02□□□□□ -1.61
SF3B2-216ENST00000534765 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
SF3B2-216ENST00000534765 PCLOQ9Y6V0 5065 aa4.98□□□□□ -1.61
SF3B2-216ENST00000534765 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
SF3B2-216ENST00000534765 LRP2P98164 4655 aa4.94□□□□□ -1.62
SF3B2-216ENST00000534765 HERC2O95714 4834 aa4.93□□□□□ -1.62
SF3B2-216ENST00000534765 RPL37P61927 97 aaKnown RBP4.92□□□□□ -1.62
SF3B2-216ENST00000534765 LCE2BO14633 110 aa4.91□□□□□ -1.62
SF3B2-216ENST00000534765 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
SF3B2-216ENST00000534765 Q5VSD8 79 aa4.9□□□□□ -1.62
SF3B2-216ENST00000534765 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
SF3B2-216ENST00000534765 HERC1Q15751 4861 aa4.89□□□□□ -1.63
SF3B2-216ENST00000534765 MUC2Q02817 5179 aa4.88□□□□□ -1.63
SF3B2-216ENST00000534765 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
SF3B2-216ENST00000534765 MT1HL1P0DM35 61 aa4.84□□□□□ -1.63
SF3B2-216ENST00000534765 KRTAP10-8P60410 259 aa4.82□□□□□ -1.64
SF3B2-216ENST00000534765 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
SF3B2-216ENST00000534765 LCE2CQ5TA81 110 aa4.75□□□□□ -1.65
SF3B2-216ENST00000534765 MUC17Q685J3 4493 aa4.71□□□□□ -1.66
SF3B2-216ENST00000534765 S4R3F8 94 aa4.7□□□□□ -1.66
SF3B2-216ENST00000534765 RPS29P62273 56 aaKnown RBP4.69□□□□□ -1.66
SF3B2-216ENST00000534765 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
SF3B2-216ENST00000534765 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
SF3B2-216ENST00000534765 RNF213Q63HN8 5207 aa4.66□□□□□ -1.66
SF3B2-216ENST00000534765 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
SF3B2-216ENST00000534765 PLAC4Q8WY50 150 aa4.64□□□□□ -1.67
SF3B2-216ENST00000534765 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
SF3B2-216ENST00000534765 XP32Q5T750 250 aa4.62□□□□□ -1.67
SF3B2-216ENST00000534765 LCE2AQ5TA79 106 aaPredicted RBP4.62□□□□□ -1.67
SF3B2-216ENST00000534765 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
SF3B2-216ENST00000534765 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
SF3B2-216ENST00000534765 FAT4Q6V0I7 4981 aa4.6□□□□□ -1.67
SF3B2-216ENST00000534765 KRTAP4-1Q9BYQ7 146 aa4.54□□□□□ -1.68
SF3B2-216ENST00000534765 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
SF3B2-216ENST00000534765 FLGP20930 4061 aaPredicted RBP4.49□□□□□ -1.69
SF3B2-216ENST00000534765 M0QZ58 72 aa4.47□□□□□ -1.69
SF3B2-216ENST00000534765 LORP23490 312 aaPredicted RBP4.47□□□□□ -1.69
SF3B2-216ENST00000534765 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
SF3B2-216ENST00000534765 R4GN34 69 aa4.43□□□□□ -1.7
SF3B2-216ENST00000534765 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
SF3B2-216ENST00000534765 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
SF3B2-216ENST00000534765 M0R2T5 61 aa4.34□□□□□ -1.71
SF3B2-216ENST00000534765 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
SF3B2-216ENST00000534765 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
SF3B2-216ENST00000534765 TNP1P09430 55 aa4.08□□□□□ -1.76
SF3B2-216ENST00000534765 USH2AO75445 5202 aa4.07□□□□□ -1.76
SF3B2-216ENST00000534765 MT1HP80294 61 aa4.07□□□□□ -1.76
SF3B2-216ENST00000534765 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
SF3B2-216ENST00000534765 MT1FP04733 61 aa3.96□□□□□ -1.78
SF3B2-216ENST00000534765 INE1O15225 51 aa3.95□□□□□ -1.78
SF3B2-216ENST00000534765 MT2AP02795 61 aa3.92□□□□□ -1.78
SF3B2-216ENST00000534765 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
SF3B2-216ENST00000534765 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
SF3B2-216ENST00000534765 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
SF3B2-216ENST00000534765 KMT2DO14686 5537 aa3.84□□□□□ -1.79
SF3B2-216ENST00000534765 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
SF3B2-216ENST00000534765 KRTAP9-3Q9BYQ3 159 aa3.79□□□□□ -1.8
SF3B2-216ENST00000534765 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
SF3B2-216ENST00000534765 MT1BP07438 61 aa3.75□□□□□ -1.81
SF3B2-216ENST00000534765 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
SF3B2-216ENST00000534765 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
SF3B2-216ENST00000534765 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
SF3B2-216ENST00000534765 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
SF3B2-216ENST00000534765 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
SF3B2-216ENST00000534765 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
SF3B2-216ENST00000534765 MT1XP80297 61 aa3.64□□□□□ -1.83
SF3B2-216ENST00000534765 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
SF3B2-216ENST00000534765 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
SF3B2-216ENST00000534765 CRCT1Q9UGL9 99 aa3.52□□□□□ -1.85
SF3B2-216ENST00000534765 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
SF3B2-216ENST00000534765 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
SF3B2-216ENST00000534765 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
SF3B2-216ENST00000534765 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
SF3B2-216ENST00000534765 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
SF3B2-216ENST00000534765 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
SF3B2-216ENST00000534765 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
SF3B2-216ENST00000534765 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
SF3B2-216ENST00000534765 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
SF3B2-216ENST00000534765 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
SF3B2-216ENST00000534765 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
SF3B2-216ENST00000534765 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms