RNA–Protein interactions for RNA: ENST00000534510.5

CTSB-232, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-232ENST00000534510 XP32Q5T750 250 aa9.08□□□□□ -0.96
CTSB-232ENST00000534510 K7ERS5 55 aa9.07□□□□□ -0.96
CTSB-232ENST00000534510 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
CTSB-232ENST00000534510 S4R3F8 94 aa9.01□□□□□ -0.97
CTSB-232ENST00000534510 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
CTSB-232ENST00000534510 LRP1Q07954 4544 aaKnown RBP8.98□□□□□ -0.97
CTSB-232ENST00000534510 KRTAP25-1Q3LHN0 102 aa8.97□□□□□ -0.97
CTSB-232ENST00000534510 HSPG2P98160 4391 aa8.94□□□□□ -0.98
CTSB-232ENST00000534510 KRTAP3-2Q9BYR7 98 aa8.93□□□□□ -0.98
CTSB-232ENST00000534510 EPPK1P58107 5090 aaKnown RBP8.9□□□□□ -0.99
CTSB-232ENST00000534510 KRTAP13-4Q3LI77 160 aa8.89□□□□□ -0.99
CTSB-232ENST00000534510 MT1HL1P0DM35 61 aa8.87□□□□□ -0.99
CTSB-232ENST00000534510 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
CTSB-232ENST00000534510 ROMO1P60602 79 aa8.84□□□□□ -0.99
CTSB-232ENST00000534510 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
CTSB-232ENST00000534510 RYR1P21817 5038 aa8.84□□□□□ -0.99
CTSB-232ENST00000534510 A0A0D9SG42 100 aa8.82□□□□□ -1
CTSB-232ENST00000534510 KIAA1109Q2LD37 5005 aa8.82□□□□□ -1
CTSB-232ENST00000534510 P0C880 135 aa8.8□□□□□ -1
CTSB-232ENST00000534510 CRIPTQ9P021 101 aa8.75□□□□□ -1.01
CTSB-232ENST00000534510 TPRXLQ17RH7 258 aa8.74□□□□□ -1.01
CTSB-232ENST00000534510 MYCBP2O75592 4640 aa8.7□□□□□ -1.02
CTSB-232ENST00000534510 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
CTSB-232ENST00000534510 M0QZ58 72 aa8.58□□□□□ -1.04
CTSB-232ENST00000534510 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
CTSB-232ENST00000534510 BIRC6Q9NR09 4857 aa8.57□□□□□ -1.04
CTSB-232ENST00000534510 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
CTSB-232ENST00000534510 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
CTSB-232ENST00000534510 LPAP08519 4548 aa8.49□□□□□ -1.05
CTSB-232ENST00000534510 LRP2P98164 4655 aa8.49□□□□□ -1.05
CTSB-232ENST00000534510 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
CTSB-232ENST00000534510 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
CTSB-232ENST00000534510 ABCA13Q86UQ4 5058 aa8.41□□□□□ -1.06
CTSB-232ENST00000534510 H3BS24 57 aa8.36□□□□□ -1.07
CTSB-232ENST00000534510 HERC2O95714 4834 aa8.36□□□□□ -1.07
CTSB-232ENST00000534510 R4GN34 69 aa8.34□□□□□ -1.07
CTSB-232ENST00000534510 J3QL48 77 aa8.33□□□□□ -1.08
CTSB-232ENST00000534510 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
CTSB-232ENST00000534510 MUC17Q685J3 4493 aa8.22□□□□□ -1.09
CTSB-232ENST00000534510 PCLOQ9Y6V0 5065 aa8.2□□□□□ -1.1
CTSB-232ENST00000534510 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
CTSB-232ENST00000534510 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
CTSB-232ENST00000534510 KRTAP19-2Q3LHN2 52 aa8.13□□□□□ -1.11
CTSB-232ENST00000534510 HERC1Q15751 4861 aa7.95□□□□□ -1.14
CTSB-232ENST00000534510 NDUFAF8A1L188 74 aa7.95□□□□□ -1.14
CTSB-232ENST00000534510 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
CTSB-232ENST00000534510 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
CTSB-232ENST00000534510 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
CTSB-232ENST00000534510 FLGP20930 4061 aaPredicted RBP7.82□□□□□ -1.16
CTSB-232ENST00000534510 HMCN2Q8NDA2 5059 aa7.79□□□□□ -1.16
CTSB-232ENST00000534510 TNP1P09430 55 aa7.65□□□□□ -1.18
CTSB-232ENST00000534510 LCE2CQ5TA81 110 aa7.61□□□□□ -1.19
CTSB-232ENST00000534510 MUC2Q02817 5179 aa7.61□□□□□ -1.19
CTSB-232ENST00000534510 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
CTSB-232ENST00000534510 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
CTSB-232ENST00000534510 UBR4Q5T4S7 5183 aa7.5□□□□□ -1.21
CTSB-232ENST00000534510 LUZP6Q538Z0 58 aa7.48□□□□□ -1.21
CTSB-232ENST00000534510 KRTAP19-1Q8IUB9 90 aa7.47□□□□□ -1.21
CTSB-232ENST00000534510 M0R2T5 61 aa7.45□□□□□ -1.22
CTSB-232ENST00000534510 RNF213Q63HN8 5207 aa7.41□□□□□ -1.22
CTSB-232ENST00000534510 MT1HP80294 61 aa7.41□□□□□ -1.22
CTSB-232ENST00000534510 MT2AP02795 61 aa7.32□□□□□ -1.24
CTSB-232ENST00000534510 SPRR5A0A1B0GTR4 108 aa7.31□□□□□ -1.24
CTSB-232ENST00000534510 MT1FP04733 61 aa7.31□□□□□ -1.24
CTSB-232ENST00000534510 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
CTSB-232ENST00000534510 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
CTSB-232ENST00000534510 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
CTSB-232ENST00000534510 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
CTSB-232ENST00000534510 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
CTSB-232ENST00000534510 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
CTSB-232ENST00000534510 MT1BP07438 61 aa7.09□□□□□ -1.27
CTSB-232ENST00000534510 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
CTSB-232ENST00000534510 KRTAP8-1Q8IUC2 63 aa7.06□□□□□ -1.28
CTSB-232ENST00000534510 MT1XP80297 61 aa7.04□□□□□ -1.28
CTSB-232ENST00000534510 KRTAP10-12P60413 245 aa6.95□□□□□ -1.3
CTSB-232ENST00000534510 KRTAP9-3Q9BYQ3 159 aa6.94□□□□□ -1.3
CTSB-232ENST00000534510 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
CTSB-232ENST00000534510 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
CTSB-232ENST00000534510 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
CTSB-232ENST00000534510 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
CTSB-232ENST00000534510 LCE2BO14633 110 aa6.64□□□□□ -1.35
CTSB-232ENST00000534510 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
CTSB-232ENST00000534510 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
CTSB-232ENST00000534510 INE1O15225 51 aa6.48□□□□□ -1.37
CTSB-232ENST00000534510 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
CTSB-232ENST00000534510 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
CTSB-232ENST00000534510 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
CTSB-232ENST00000534510 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
CTSB-232ENST00000534510 USH2AO75445 5202 aa6.34□□□□□ -1.39
CTSB-232ENST00000534510 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
CTSB-232ENST00000534510 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.42
CTSB-232ENST00000534510 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
CTSB-232ENST00000534510 KRTAP9-6A8MVA2 160 aa6.2□□□□□ -1.42
CTSB-232ENST00000534510 KMT2DO14686 5537 aa6.2□□□□□ -1.42
CTSB-232ENST00000534510 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
CTSB-232ENST00000534510 MT1EP04732 61 aa6.11□□□□□ -1.43
CTSB-232ENST00000534510 MT1LQ93083 61 aa6.11□□□□□ -1.43
CTSB-232ENST00000534510 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
CTSB-232ENST00000534510 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
CTSB-232ENST00000534510 KRTAP9-6A0A140TA67 174 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms