RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 KRTAP19-8Q3LI54 63 aa6.03□□□□□ -1.44
CAPN1-228ENST00000534373 Q5VV11 94 aa6.03□□□□□ -1.44
CAPN1-228ENST00000534373 LOC101927531A0A1B0GV80 90 aa6.02□□□□□ -1.45
CAPN1-228ENST00000534373 K7ERU9 68 aa6.01□□□□□ -1.45
CAPN1-228ENST00000534373 MT1BP07438 61 aa6.01□□□□□ -1.45
CAPN1-228ENST00000534373 KLKP1Q107X0 134 aa6.01□□□□□ -1.45
CAPN1-228ENST00000534373 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
CAPN1-228ENST00000534373 A6NN06 94 aa6□□□□□ -1.45
CAPN1-228ENST00000534373 ATOX1O00244 68 aa5.99□□□□□ -1.45
CAPN1-228ENST00000534373 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
CAPN1-228ENST00000534373 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
CAPN1-228ENST00000534373 MT-ATP8P03928 68 aa5.95□□□□□ -1.46
CAPN1-228ENST00000534373 SCGB1A1P11684 91 aa5.95□□□□□ -1.46
CAPN1-228ENST00000534373 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
CAPN1-228ENST00000534373 MP68P56378 58 aa5.94□□□□□ -1.46
CAPN1-228ENST00000534373 IMUPQ9GZP8 106 aa5.93□□□□□ -1.46
CAPN1-228ENST00000534373 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
CAPN1-228ENST00000534373 NDUFC1O43677 76 aa5.9□□□□□ -1.46
CAPN1-228ENST00000534373 H0YAA0 97 aa5.89□□□□□ -1.47
CAPN1-228ENST00000534373 A8MUN3 132 aa5.88□□□□□ -1.47
CAPN1-228ENST00000534373 MUC12Q9UKN1 5478 aa5.84□□□□□ -1.47
CAPN1-228ENST00000534373 H3BPC8 53 aa5.83□□□□□ -1.48
CAPN1-228ENST00000534373 NEBP20929 6669 aa5.8□□□□□ -1.48
CAPN1-228ENST00000534373 SMIM20Q8N5G0 67 aa5.79□□□□□ -1.48
CAPN1-228ENST00000534373 TRAV7A0A075B6U4 112 aa5.78□□□□□ -1.48
CAPN1-228ENST00000534373 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
CAPN1-228ENST00000534373 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
CAPN1-228ENST00000534373 DMAC1Q96GE9 116 aa5.71□□□□□ -1.5
CAPN1-228ENST00000534373 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
CAPN1-228ENST00000534373 KMT2DO14686 5537 aa5.69□□□□□ -1.5
CAPN1-228ENST00000534373 SNURFQ9Y675 71 aa5.69□□□□□ -1.5
CAPN1-228ENST00000534373 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
CAPN1-228ENST00000534373 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
CAPN1-228ENST00000534373 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
CAPN1-228ENST00000534373 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
CAPN1-228ENST00000534373 R4GN34 69 aa5.65□□□□□ -1.5
CAPN1-228ENST00000534373 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
CAPN1-228ENST00000534373 MT1XP80297 61 aa5.62□□□□□ -1.51
CAPN1-228ENST00000534373 P0C880 135 aa5.61□□□□□ -1.51
CAPN1-228ENST00000534373 ACYP2P14621 99 aa5.6□□□□□ -1.51
CAPN1-228ENST00000534373 M0QZ58 72 aa5.57□□□□□ -1.52
CAPN1-228ENST00000534373 CHKB-CPT1BH3BT56 60 aa5.56□□□□□ -1.52
CAPN1-228ENST00000534373 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
CAPN1-228ENST00000534373 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
CAPN1-228ENST00000534373 COX7CP15954 63 aa5.53□□□□□ -1.52
CAPN1-228ENST00000534373 SPANXA2-OT1Q8N9U9 137 aa5.53□□□□□ -1.52
CAPN1-228ENST00000534373 SPRR2FQ96RM1 72 aa5.53□□□□□ -1.52
CAPN1-228ENST00000534373 SPTSSBQ8NFR3 76 aa5.52□□□□□ -1.53
CAPN1-228ENST00000534373 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
CAPN1-228ENST00000534373 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
CAPN1-228ENST00000534373 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
CAPN1-228ENST00000534373 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
CAPN1-228ENST00000534373 SPRR2EP22531 72 aa5.47□□□□□ -1.53
CAPN1-228ENST00000534373 SPRR2BP35325 72 aa5.47□□□□□ -1.53
CAPN1-228ENST00000534373 SPRR2AP35326 72 aa5.47□□□□□ -1.53
CAPN1-228ENST00000534373 ANAPC13Q9BS18 74 aa5.47□□□□□ -1.53
CAPN1-228ENST00000534373 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
CAPN1-228ENST00000534373 COA5Q86WW8 74 aa5.42□□□□□ -1.54
CAPN1-228ENST00000534373 H7BZZ5 65 aa5.4□□□□□ -1.54
CAPN1-228ENST00000534373 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
CAPN1-228ENST00000534373 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
CAPN1-228ENST00000534373 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
CAPN1-228ENST00000534373 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
CAPN1-228ENST00000534373 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
CAPN1-228ENST00000534373 CCDC179H3BU77 68 aa5.34□□□□□ -1.55
CAPN1-228ENST00000534373 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
CAPN1-228ENST00000534373 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
CAPN1-228ENST00000534373 SPRR2DP22532 72 aa5.29□□□□□ -1.56
CAPN1-228ENST00000534373 SEC61GP60059 68 aa5.25□□□□□ -1.57
CAPN1-228ENST00000534373 SERP1Q9Y6X1 66 aa5.23□□□□□ -1.57
CAPN1-228ENST00000534373 ATP5EP56381 51 aaPredicted RBP5.21□□□□□ -1.58
CAPN1-228ENST00000534373 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.58
CAPN1-228ENST00000534373 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
CAPN1-228ENST00000534373 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
CAPN1-228ENST00000534373 PCP4P48539 62 aa5.15□□□□□ -1.59
CAPN1-228ENST00000534373 TMEM258P61165 79 aa5.14□□□□□ -1.59
CAPN1-228ENST00000534373 A0A0D9SG42 100 aa5.13□□□□□ -1.59
CAPN1-228ENST00000534373 A0A1B0GU33 70 aa5.13□□□□□ -1.59
CAPN1-228ENST00000534373 A0A1B0GU69 56 aa5.13□□□□□ -1.59
CAPN1-228ENST00000534373 SPATA8Q6RVD6 105 aa5.11□□□□□ -1.59
CAPN1-228ENST00000534373 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
CAPN1-228ENST00000534373 PRR15LQ9BU68 103 aa5.03□□□□□ -1.6
CAPN1-228ENST00000534373 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
CAPN1-228ENST00000534373 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
CAPN1-228ENST00000534373 SMIM26A0A096LP01 95 aa4.99□□□□□ -1.61
CAPN1-228ENST00000534373 MT1EP04732 61 aa4.99□□□□□ -1.61
CAPN1-228ENST00000534373 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
CAPN1-228ENST00000534373 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
CAPN1-228ENST00000534373 A8MU10 97 aa4.97□□□□□ -1.61
CAPN1-228ENST00000534373 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
CAPN1-228ENST00000534373 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
CAPN1-228ENST00000534373 MT1GP13640 62 aa4.88□□□□□ -1.63
CAPN1-228ENST00000534373 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
CAPN1-228ENST00000534373 UQCR11O14957 56 aa4.85□□□□□ -1.63
CAPN1-228ENST00000534373 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
CAPN1-228ENST00000534373 PSPHP1O15172 72 aa4.81□□□□□ -1.64
CAPN1-228ENST00000534373 V9GYY9 64 aa4.81□□□□□ -1.64
CAPN1-228ENST00000534373 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
CAPN1-228ENST00000534373 TNP1P09430 55 aa4.77□□□□□ -1.65
CAPN1-228ENST00000534373 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms