RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 SPRR2GQ9BYE4 73 aa8.53□□□□□ -1.04
LRRK1-210ENST00000534045 NDUFC1O43677 76 aa8.52□□□□□ -1.05
LRRK1-210ENST00000534045 A0A087WVE0 104 aa8.51□□□□□ -1.05
LRRK1-210ENST00000534045 A6NN06 94 aa8.51□□□□□ -1.05
LRRK1-210ENST00000534045 IMUPQ9GZP8 106 aa8.5□□□□□ -1.05
LRRK1-210ENST00000534045 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
LRRK1-210ENST00000534045 CRIPTQ9P021 101 aa8.47□□□□□ -1.05
LRRK1-210ENST00000534045 MT1BP07438 61 aa8.46□□□□□ -1.06
LRRK1-210ENST00000534045 MP68P56378 58 aa8.46□□□□□ -1.06
LRRK1-210ENST00000534045 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.06
LRRK1-210ENST00000534045 A8MUN3 132 aa8.44□□□□□ -1.06
LRRK1-210ENST00000534045 KRTAP6-3Q3LI67 103 aa8.43□□□□□ -1.06
LRRK1-210ENST00000534045 A0A1B0GV90 55 aa8.41□□□□□ -1.06
LRRK1-210ENST00000534045 J3QR89 54 aa8.39□□□□□ -1.07
LRRK1-210ENST00000534045 H0YAA0 97 aa8.35□□□□□ -1.07
LRRK1-210ENST00000534045 OCR1Q9BZK8 76 aa8.35□□□□□ -1.07
LRRK1-210ENST00000534045 SCGB1A1P11684 91 aa8.33□□□□□ -1.08
LRRK1-210ENST00000534045 ADM2Q7Z4H4 148 aa8.32□□□□□ -1.08
LRRK1-210ENST00000534045 KRTAP10-5P60370 271 aa8.31□□□□□ -1.08
LRRK1-210ENST00000534045 H3BPC8 53 aa8.28□□□□□ -1.08
LRRK1-210ENST00000534045 C20orf197Q8N268 126 aa8.18□□□□□ -1.1
LRRK1-210ENST00000534045 PLAC4Q8WY50 150 aa8.15□□□□□ -1.1
LRRK1-210ENST00000534045 R4GN34 69 aa8.15□□□□□ -1.1
LRRK1-210ENST00000534045 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
LRRK1-210ENST00000534045 PRO2289Q9P1D8 64 aa8.11□□□□□ -1.11
LRRK1-210ENST00000534045 M0QZ58 72 aa8.06□□□□□ -1.12
LRRK1-210ENST00000534045 P0C880 135 aa8.05□□□□□ -1.12
LRRK1-210ENST00000534045 ACYP2P14621 99 aa8.03□□□□□ -1.12
LRRK1-210ENST00000534045 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
LRRK1-210ENST00000534045 NEBP20929 6669 aa8.03□□□□□ -1.12
LRRK1-210ENST00000534045 TRAV7A0A075B6U4 112 aa8.02□□□□□ -1.13
LRRK1-210ENST00000534045 K7ERU9 68 aa8□□□□□ -1.13
LRRK1-210ENST00000534045 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
LRRK1-210ENST00000534045 SPTSSBQ8NFR3 76 aa7.99□□□□□ -1.13
LRRK1-210ENST00000534045 MUC12Q9UKN1 5478 aa7.98□□□□□ -1.13
LRRK1-210ENST00000534045 MT-ATP8P03928 68 aa7.98□□□□□ -1.13
LRRK1-210ENST00000534045 KRTAP5-9P26371 169 aa7.97□□□□□ -1.13
LRRK1-210ENST00000534045 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
LRRK1-210ENST00000534045 CHKB-CPT1BH3BT56 60 aa7.93□□□□□ -1.14
LRRK1-210ENST00000534045 MT1XP80297 61 aa7.93□□□□□ -1.14
LRRK1-210ENST00000534045 KRTAP20-1Q3LI63 56 aa7.85□□□□□ -1.15
LRRK1-210ENST00000534045 KMT2DO14686 5537 aa7.84□□□□□ -1.15
LRRK1-210ENST00000534045 SPRR2FQ96RM1 72 aa7.83□□□□□ -1.16
LRRK1-210ENST00000534045 SNURFQ9Y675 71 aa7.83□□□□□ -1.16
LRRK1-210ENST00000534045 KRTAP8-1Q8IUC2 63 aa7.8□□□□□ -1.16
LRRK1-210ENST00000534045 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
LRRK1-210ENST00000534045 MDN1Q9NU22 5596 aa7.76□□□□□ -1.17
LRRK1-210ENST00000534045 SPRR2EP22531 72 aa7.72□□□□□ -1.17
LRRK1-210ENST00000534045 SPRR2BP35325 72 aa7.72□□□□□ -1.17
LRRK1-210ENST00000534045 SPRR2AP35326 72 aa7.72□□□□□ -1.17
LRRK1-210ENST00000534045 SPANXA2-OT1Q8N9U9 137 aa7.72□□□□□ -1.17
LRRK1-210ENST00000534045 SERP2Q8N6R1 65 aa7.7□□□□□ -1.18
LRRK1-210ENST00000534045 KRTAP2-3P0C7H8 128 aa7.65□□□□□ -1.18
LRRK1-210ENST00000534045 KRTAP2-4Q9BYR9 128 aa7.65□□□□□ -1.18
LRRK1-210ENST00000534045 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
LRRK1-210ENST00000534045 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
LRRK1-210ENST00000534045 KRTAP10-7P60409 375 aaPredicted RBP7.59□□□□□ -1.19
LRRK1-210ENST00000534045 SEC61GP60059 68 aa7.55□□□□□ -1.2
LRRK1-210ENST00000534045 LCE1AQ5T7P2 110 aa7.55□□□□□ -1.2
LRRK1-210ENST00000534045 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
LRRK1-210ENST00000534045 CAMK2N1Q7Z7J9 78 aa7.53□□□□□ -1.2
LRRK1-210ENST00000534045 COA5Q86WW8 74 aa7.52□□□□□ -1.21
LRRK1-210ENST00000534045 SERP1Q9Y6X1 66 aa7.51□□□□□ -1.21
LRRK1-210ENST00000534045 SPRR2DP22532 72 aa7.47□□□□□ -1.21
LRRK1-210ENST00000534045 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
LRRK1-210ENST00000534045 COX7CP15954 63 aa7.44□□□□□ -1.22
LRRK1-210ENST00000534045 KRTAP2-2Q9BYT5 123 aa7.41□□□□□ -1.22
LRRK1-210ENST00000534045 KRTAP2-1Q9BYU5 128 aa7.41□□□□□ -1.22
LRRK1-210ENST00000534045 A0A0D9SG42 100 aa7.37□□□□□ -1.23
LRRK1-210ENST00000534045 A0A1B0GU33 70 aa7.33□□□□□ -1.24
LRRK1-210ENST00000534045 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
LRRK1-210ENST00000534045 H7BZZ5 65 aa7.3□□□□□ -1.24
LRRK1-210ENST00000534045 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
LRRK1-210ENST00000534045 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
LRRK1-210ENST00000534045 CYSTM1Q9H1C7 97 aa7.24□□□□□ -1.25
LRRK1-210ENST00000534045 A0A1B0GU69 56 aa7.21□□□□□ -1.26
LRRK1-210ENST00000534045 ANAPC13Q9BS18 74 aa7.18□□□□□ -1.26
LRRK1-210ENST00000534045 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
LRRK1-210ENST00000534045 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
LRRK1-210ENST00000534045 KRTAP19-7Q3SYF9 63 aa7.07□□□□□ -1.28
LRRK1-210ENST00000534045 MT1EP04732 61 aa7.04□□□□□ -1.28
LRRK1-210ENST00000534045 KRTAP19-3Q7Z4W3 81 aa7.02□□□□□ -1.29
LRRK1-210ENST00000534045 PRR15LQ9BU68 103 aa7.02□□□□□ -1.29
LRRK1-210ENST00000534045 A8MU10 97 aa7.01□□□□□ -1.29
LRRK1-210ENST00000534045 LCE5AQ5TCM9 118 aa7.01□□□□□ -1.29
LRRK1-210ENST00000534045 CCDC179H3BU77 68 aa6.98□□□□□ -1.29
LRRK1-210ENST00000534045 ATP5EP56381 51 aaPredicted RBP6.97□□□□□ -1.29
LRRK1-210ENST00000534045 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
LRRK1-210ENST00000534045 DSTQ03001 7570 aaKnown RBP6.91□□□□□ -1.3
LRRK1-210ENST00000534045 TNP1P09430 55 aa6.91□□□□□ -1.3
LRRK1-210ENST00000534045 MT1GP13640 62 aa6.89□□□□□ -1.31
LRRK1-210ENST00000534045 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
LRRK1-210ENST00000534045 LINC01558Q9Y6Z2 57 aa6.83□□□□□ -1.32
LRRK1-210ENST00000534045 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
LRRK1-210ENST00000534045 LCE3AQ5TA76 89 aa6.78□□□□□ -1.32
LRRK1-210ENST00000534045 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
LRRK1-210ENST00000534045 UQCR11O14957 56 aa6.74□□□□□ -1.33
LRRK1-210ENST00000534045 TMEM258P61165 79 aa6.74□□□□□ -1.33
LRRK1-210ENST00000534045 MT1LQ93083 61 aa6.73□□□□□ -1.33
LRRK1-210ENST00000534045 MT1MQ8N339 61 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms