RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 ATP5EP2Q5VTU8 51 aa8.07□□□□□ -1.12
HIF3A-216ENST00000533789 NEBP20929 6669 aa8.06□□□□□ -1.12
HIF3A-216ENST00000533789 IMUPQ9GZP8 106 aa8.05□□□□□ -1.12
HIF3A-216ENST00000533789 MUC12Q9UKN1 5478 aa8.05□□□□□ -1.12
HIF3A-216ENST00000533789 FAM240AA0A1B0GVK7 77 aa8.03□□□□□ -1.12
HIF3A-216ENST00000533789 PCP4L1A6NKN8 68 aa8.03□□□□□ -1.12
HIF3A-216ENST00000533789 UQCRQO14949 82 aa8.03□□□□□ -1.12
HIF3A-216ENST00000533789 ATOX1O00244 68 aa8.02□□□□□ -1.13
HIF3A-216ENST00000533789 H0Y9P7 68 aa8.01□□□□□ -1.13
HIF3A-216ENST00000533789 H0YAA0 97 aa8.01□□□□□ -1.13
HIF3A-216ENST00000533789 HIST1H4AP62805 103 aaKnown RBP8.01□□□□□ -1.13
HIF3A-216ENST00000533789 NDUFC1O43677 76 aa8□□□□□ -1.13
HIF3A-216ENST00000533789 KRTAP5-9P26371 169 aa7.97□□□□□ -1.13
HIF3A-216ENST00000533789 A8MUN3 132 aa7.94□□□□□ -1.14
HIF3A-216ENST00000533789 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
HIF3A-216ENST00000533789 KMT2DO14686 5537 aa7.86□□□□□ -1.15
HIF3A-216ENST00000533789 LINC00208Q96KT6 92 aa7.86□□□□□ -1.15
HIF3A-216ENST00000533789 KRTAP20-1Q3LI63 56 aa7.85□□□□□ -1.15
HIF3A-216ENST00000533789 LINC00643Q86TS7 51 aa7.85□□□□□ -1.15
HIF3A-216ENST00000533789 MP68P56378 58 aa7.8□□□□□ -1.16
HIF3A-216ENST00000533789 OCR1Q9BZK8 76 aa7.8□□□□□ -1.16
HIF3A-216ENST00000533789 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
HIF3A-216ENST00000533789 MDN1Q9NU22 5596 aa7.78□□□□□ -1.16
HIF3A-216ENST00000533789 MT1XP80297 61 aa7.75□□□□□ -1.17
HIF3A-216ENST00000533789 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
HIF3A-216ENST00000533789 R4GN34 69 aa7.71□□□□□ -1.18
HIF3A-216ENST00000533789 C20orf197Q8N268 126 aa7.7□□□□□ -1.18
HIF3A-216ENST00000533789 H3BPC8 53 aa7.68□□□□□ -1.18
HIF3A-216ENST00000533789 P0C880 135 aa7.68□□□□□ -1.18
HIF3A-216ENST00000533789 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
HIF3A-216ENST00000533789 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
HIF3A-216ENST00000533789 M0QZ58 72 aa7.64□□□□□ -1.19
HIF3A-216ENST00000533789 SPRR2EP22531 72 aa7.61□□□□□ -1.19
HIF3A-216ENST00000533789 SPRR2BP35325 72 aa7.61□□□□□ -1.19
HIF3A-216ENST00000533789 SPRR2AP35326 72 aa7.61□□□□□ -1.19
HIF3A-216ENST00000533789 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
HIF3A-216ENST00000533789 KRTAP2-3P0C7H8 128 aa7.6□□□□□ -1.19
HIF3A-216ENST00000533789 KRTAP8-1Q8IUC2 63 aa7.6□□□□□ -1.19
HIF3A-216ENST00000533789 KRTAP2-4Q9BYR9 128 aa7.6□□□□□ -1.19
HIF3A-216ENST00000533789 A0A1B0GV90 55 aa7.59□□□□□ -1.19
HIF3A-216ENST00000533789 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
HIF3A-216ENST00000533789 SCGB1A1P11684 91 aa7.55□□□□□ -1.2
HIF3A-216ENST00000533789 J3QR89 54 aa7.54□□□□□ -1.2
HIF3A-216ENST00000533789 LINC01554Q52M75 96 aa7.52□□□□□ -1.21
HIF3A-216ENST00000533789 TRAV7A0A075B6U4 112 aa7.49□□□□□ -1.21
HIF3A-216ENST00000533789 LCE1AQ5T7P2 110 aa7.48□□□□□ -1.21
HIF3A-216ENST00000533789 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
HIF3A-216ENST00000533789 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
HIF3A-216ENST00000533789 ACYP2P14621 99 aa7.42□□□□□ -1.22
HIF3A-216ENST00000533789 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
HIF3A-216ENST00000533789 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
HIF3A-216ENST00000533789 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
HIF3A-216ENST00000533789 MT-ATP8P03928 68 aa7.36□□□□□ -1.23
HIF3A-216ENST00000533789 SPRR2DP22532 72 aa7.36□□□□□ -1.23
HIF3A-216ENST00000533789 KRTAP2-2Q9BYT5 123 aa7.34□□□□□ -1.23
HIF3A-216ENST00000533789 KRTAP2-1Q9BYU5 128 aa7.34□□□□□ -1.23
HIF3A-216ENST00000533789 SMIM20Q8N5G0 67 aa7.33□□□□□ -1.24
HIF3A-216ENST00000533789 CHKB-CPT1BH3BT56 60 aa7.28□□□□□ -1.24
HIF3A-216ENST00000533789 SNURFQ9Y675 71 aa7.18□□□□□ -1.26
HIF3A-216ENST00000533789 LCE3BQ5TA77 95 aa7.17□□□□□ -1.26
HIF3A-216ENST00000533789 K7ERU9 68 aa7.16□□□□□ -1.26
HIF3A-216ENST00000533789 SPANXA2-OT1Q8N9U9 137 aa7.14□□□□□ -1.27
HIF3A-216ENST00000533789 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
HIF3A-216ENST00000533789 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
HIF3A-216ENST00000533789 SERP2Q8N6R1 65 aa7.01□□□□□ -1.29
HIF3A-216ENST00000533789 COA5Q86WW8 74 aa6.95□□□□□ -1.3
HIF3A-216ENST00000533789 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
HIF3A-216ENST00000533789 LCE5AQ5TCM9 118 aa6.9□□□□□ -1.3
HIF3A-216ENST00000533789 MT1EP04732 61 aa6.88□□□□□ -1.31
HIF3A-216ENST00000533789 SEC61GP60059 68 aa6.88□□□□□ -1.31
HIF3A-216ENST00000533789 A0A0D9SG42 100 aa6.87□□□□□ -1.31
HIF3A-216ENST00000533789 KRTAP19-3Q7Z4W3 81 aa6.86□□□□□ -1.31
HIF3A-216ENST00000533789 SERP1Q9Y6X1 66 aa6.86□□□□□ -1.31
HIF3A-216ENST00000533789 SPATA8Q6RVD6 105 aa6.83□□□□□ -1.32
HIF3A-216ENST00000533789 DSTQ03001 7570 aaKnown RBP6.8□□□□□ -1.32
HIF3A-216ENST00000533789 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
HIF3A-216ENST00000533789 A0A1B0GU33 70 aa6.77□□□□□ -1.33
HIF3A-216ENST00000533789 KRTAP12-1P59990 96 aa6.74□□□□□ -1.33
HIF3A-216ENST00000533789 COX7CP15954 63 aa6.73□□□□□ -1.33
HIF3A-216ENST00000533789 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
HIF3A-216ENST00000533789 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
HIF3A-216ENST00000533789 H7BZZ5 65 aa6.69□□□□□ -1.34
HIF3A-216ENST00000533789 KRTAP4-9Q9BYQ8 210 aa6.68□□□□□ -1.34
HIF3A-216ENST00000533789 MT1GP13640 62 aa6.67□□□□□ -1.34
HIF3A-216ENST00000533789 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
HIF3A-216ENST00000533789 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.35
HIF3A-216ENST00000533789 A0A1B0GU69 56 aa6.59□□□□□ -1.35
HIF3A-216ENST00000533789 GPR98Q8WXG9 6306 aa6.58□□□□□ -1.36
HIF3A-216ENST00000533789 MT1MQ8N339 61 aa6.57□□□□□ -1.36
HIF3A-216ENST00000533789 MT1LQ93083 61 aa6.55□□□□□ -1.36
HIF3A-216ENST00000533789 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
HIF3A-216ENST00000533789 A8MU10 97 aa6.53□□□□□ -1.36
HIF3A-216ENST00000533789 LCE4AQ5TA78 99 aa6.5□□□□□ -1.37
HIF3A-216ENST00000533789 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
HIF3A-216ENST00000533789 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
HIF3A-216ENST00000533789 TNP1P09430 55 aa6.46□□□□□ -1.38
HIF3A-216ENST00000533789 MT4P47944 62 aa6.43□□□□□ -1.38
HIF3A-216ENST00000533789 HMCN1Q96RW7 5635 aa6.43□□□□□ -1.38
HIF3A-216ENST00000533789 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
HIF3A-216ENST00000533789 ANAPC13Q9BS18 74 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms