RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 DNAH6Q9C0G6 4158 aa3.05□□□□□ -1.92
UBQLN1-206ENST00000533705 HYDINQ4G0P3 5121 aa3.03□□□□□ -1.92
UBQLN1-206ENST00000533705 KRTAP12-1P59990 96 aa3.03□□□□□ -1.92
UBQLN1-206ENST00000533705 KRTAP3-1Q9BYR8 98 aa3.03□□□□□ -1.92
UBQLN1-206ENST00000533705 DNAH9Q9NYC9 4486 aa3.02□□□□□ -1.93
UBQLN1-206ENST00000533705 HECTD4Q9Y4D8 3996 aa3.01□□□□□ -1.93
UBQLN1-206ENST00000533705 MT1HL1P0DM35 61 aa3□□□□□ -1.93
UBQLN1-206ENST00000533705 PCLOQ9Y6V0 5065 aa2.99□□□□□ -1.93
UBQLN1-206ENST00000533705 EPPK1P58107 5090 aaKnown RBP2.98□□□□□ -1.93
UBQLN1-206ENST00000533705 KRTAP15-1Q3LI76 137 aa2.97□□□□□ -1.93
UBQLN1-206ENST00000533705 KRTAP4-5Q9BYR2 181 aa2.97□□□□□ -1.93
UBQLN1-206ENST00000533705 SACSQ9NZJ4 4579 aa2.97□□□□□ -1.93
UBQLN1-206ENST00000533705 FAT2Q9NYQ8 4349 aa2.95□□□□□ -1.94
UBQLN1-206ENST00000533705 PKD1P98161 4303 aa2.95□□□□□ -1.94
UBQLN1-206ENST00000533705 HUWE1Q7Z6Z7 4374 aaKnown RBP2.94□□□□□ -1.94
UBQLN1-206ENST00000533705 DNAH17Q9UFH2 4485 aa2.94□□□□□ -1.94
UBQLN1-206ENST00000533705 KRTAP10-6P60371 365 aaPredicted RBP2.93□□□□□ -1.94
UBQLN1-206ENST00000533705 HERC2O95714 4834 aa2.93□□□□□ -1.94
UBQLN1-206ENST00000533705 FAT3Q8TDW7 4589 aa2.92□□□□□ -1.94
UBQLN1-206ENST00000533705 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
UBQLN1-206ENST00000533705 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
UBQLN1-206ENST00000533705 PLECQ15149 4684 aaKnown RBP2.88□□□□□ -1.95
UBQLN1-206ENST00000533705 DNAH11Q96DT5 4516 aa2.88□□□□□ -1.95
UBQLN1-206ENST00000533705 KRTAP10-4P60372 401 aaPredicted RBP2.88□□□□□ -1.95
UBQLN1-206ENST00000533705 PKHD1P08F94 4074 aa2.87□□□□□ -1.95
UBQLN1-206ENST00000533705 ABCA13Q86UQ4 5058 aa2.86□□□□□ -1.95
UBQLN1-206ENST00000533705 BIRC6Q9NR09 4857 aa2.86□□□□□ -1.95
UBQLN1-206ENST00000533705 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
UBQLN1-206ENST00000533705 DNAH2Q9P225 4427 aa2.85□□□□□ -1.95
UBQLN1-206ENST00000533705 PKHD1L1Q86WI1 4243 aa2.85□□□□□ -1.95
UBQLN1-206ENST00000533705 VPS13DQ5THJ4 4388 aa2.85□□□□□ -1.95
UBQLN1-206ENST00000533705 VPS13BQ7Z7G8 4022 aa2.84□□□□□ -1.95
UBQLN1-206ENST00000533705 KRTAP3-3Q9BYR6 98 aa2.82□□□□□ -1.96
UBQLN1-206ENST00000533705 KRTAP3-2Q9BYR7 98 aa2.82□□□□□ -1.96
UBQLN1-206ENST00000533705 DNAH10Q8IVF4 4471 aa2.8□□□□□ -1.96
UBQLN1-206ENST00000533705 KMT2AQ03164 3969 aa2.8□□□□□ -1.96
UBQLN1-206ENST00000533705 DYNC1H1Q14204 4646 aaKnown RBP2.78□□□□□ -1.96
UBQLN1-206ENST00000533705 RYR1P21817 5038 aa2.76□□□□□ -1.97
UBQLN1-206ENST00000533705 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
UBQLN1-206ENST00000533705 ALMS1Q8TCU4 4167 aa2.75□□□□□ -1.97
UBQLN1-206ENST00000533705 DNAH8Q96JB1 4490 aa2.72□□□□□ -1.97
UBQLN1-206ENST00000533705 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
UBQLN1-206ENST00000533705 LORP23490 312 aaPredicted RBP2.72□□□□□ -1.97
UBQLN1-206ENST00000533705 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
UBQLN1-206ENST00000533705 DNAH5Q8TE73 4624 aa2.7□□□□□ -1.98
UBQLN1-206ENST00000533705 KRTAP23-1A1A580 65 aa2.69□□□□□ -1.98
UBQLN1-206ENST00000533705 INE1O15225 51 aa2.68□□□□□ -1.98
UBQLN1-206ENST00000533705 APOBP04114 4563 aaKnown RBP2.67□□□□□ -1.98
UBQLN1-206ENST00000533705 KIAA1109Q2LD37 5005 aa2.64□□□□□ -1.99
UBQLN1-206ENST00000533705 HMCN2Q8NDA2 5059 aa2.64□□□□□ -1.99
UBQLN1-206ENST00000533705 MT1HP80294 61 aa2.63□□□□□ -1.99
UBQLN1-206ENST00000533705 KRTAP4-1Q9BYQ7 146 aa2.63□□□□□ -1.99
UBQLN1-206ENST00000533705 HSPG2P98160 4391 aa2.63□□□□□ -1.99
UBQLN1-206ENST00000533705 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
UBQLN1-206ENST00000533705 LRP1BQ9NZR2 4599 aa2.59□□□□□ -1.99
UBQLN1-206ENST00000533705 MT2AP02795 61 aa2.58□□□□□ -2
UBQLN1-206ENST00000533705 TNXBP22105 4242 aa2.58□□□□□ -2
UBQLN1-206ENST00000533705 FAT1Q14517 4588 aa2.57□□□□□ -2
UBQLN1-206ENST00000533705 HERC1Q15751 4861 aa2.56□□□□□ -2
UBQLN1-206ENST00000533705 SPRR2FQ96RM1 72 aa2.55□□□□□ -2
UBQLN1-206ENST00000533705 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
UBQLN1-206ENST00000533705 MT1FP04733 61 aa2.52□□□□□ -2.01
UBQLN1-206ENST00000533705 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
UBQLN1-206ENST00000533705 MYCBP2O75592 4640 aa2.5□□□□□ -2.01
UBQLN1-206ENST00000533705 KRTAP17-1Q9BYP8 105 aa2.48□□□□□ -2.01
UBQLN1-206ENST00000533705 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
UBQLN1-206ENST00000533705 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
UBQLN1-206ENST00000533705 FAT4Q6V0I7 4981 aa2.41□□□□□ -2.02
UBQLN1-206ENST00000533705 SPRR2EP22531 72 aa2.41□□□□□ -2.02
UBQLN1-206ENST00000533705 SPRR2BP35325 72 aa2.41□□□□□ -2.02
UBQLN1-206ENST00000533705 SPRR2AP35326 72 aa2.41□□□□□ -2.02
UBQLN1-206ENST00000533705 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
UBQLN1-206ENST00000533705 KRTAP19-4Q3LI73 84 aa2.38□□□□□ -2.03
UBQLN1-206ENST00000533705 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
UBQLN1-206ENST00000533705 KRTAP19-1Q8IUB9 90 aa2.34□□□□□ -2.04
UBQLN1-206ENST00000533705 MUC17Q685J3 4493 aa2.34□□□□□ -2.04
UBQLN1-206ENST00000533705 RNF213Q63HN8 5207 aa2.33□□□□□ -2.04
UBQLN1-206ENST00000533705 SPRR2DP22532 72 aa2.33□□□□□ -2.04
UBQLN1-206ENST00000533705 LRP1Q07954 4544 aaKnown RBP2.32□□□□□ -2.04
UBQLN1-206ENST00000533705 LCE2BO14633 110 aa2.3□□□□□ -2.04
UBQLN1-206ENST00000533705 LRP2P98164 4655 aa2.28□□□□□ -2.04
UBQLN1-206ENST00000533705 MT1XP80297 61 aa2.28□□□□□ -2.04
UBQLN1-206ENST00000533705 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
UBQLN1-206ENST00000533705 MT1BP07438 61 aa2.27□□□□□ -2.05
UBQLN1-206ENST00000533705 LCE3BQ5TA77 95 aa2.27□□□□□ -2.05
UBQLN1-206ENST00000533705 KRTAP9-8Q9BYQ0 159 aa2.27□□□□□ -2.05
UBQLN1-206ENST00000533705 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
UBQLN1-206ENST00000533705 MT1GP13640 62 aa2.26□□□□□ -2.05
UBQLN1-206ENST00000533705 KRTAP4-8A0A0G2JLE6 195 aa2.24□□□□□ -2.05
UBQLN1-206ENST00000533705 KRTAP4-8Q9BYQ9 185 aa2.24□□□□□ -2.05
UBQLN1-206ENST00000533705 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
UBQLN1-206ENST00000533705 MUC2Q02817 5179 aa2.22□□□□□ -2.05
UBQLN1-206ENST00000533705 LCE2CQ5TA81 110 aa2.21□□□□□ -2.05
UBQLN1-206ENST00000533705 LCE2DQ5TA82 110 aaPredicted RBP2.14□□□□□ -2.07
UBQLN1-206ENST00000533705 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
UBQLN1-206ENST00000533705 KRTAP9-2Q9BYQ4 174 aa2.13□□□□□ -2.07
UBQLN1-206ENST00000533705 LPAP08519 4548 aa2.13□□□□□ -2.07
UBQLN1-206ENST00000533705 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
UBQLN1-206ENST00000533705 LCE2AQ5TA79 106 aaPredicted RBP2.09□□□□□ -2.07
UBQLN1-206ENST00000533705 MT4P47944 62 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms