RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 J3QR89 54 aa4.29□□□□□ -1.72
COPB1-210ENST00000533533 LINC00643Q86TS7 51 aa4.29□□□□□ -1.72
COPB1-210ENST00000533533 TP53AIP1Q9HCN2 124 aa4.29□□□□□ -1.72
COPB1-210ENST00000533533 A0A087WVE0 104 aa4.26□□□□□ -1.73
COPB1-210ENST00000533533 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
COPB1-210ENST00000533533 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
COPB1-210ENST00000533533 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
COPB1-210ENST00000533533 TRAV22A0A0B4J277 110 aa4.22□□□□□ -1.73
COPB1-210ENST00000533533 UQCRQO14949 82 aa4.2□□□□□ -1.74
COPB1-210ENST00000533533 H0Y9P7 68 aa4.19□□□□□ -1.74
COPB1-210ENST00000533533 LOC101927531A0A1B0GV80 90 aa4.18□□□□□ -1.74
COPB1-210ENST00000533533 C1orf64Q8NEQ6 169 aa4.18□□□□□ -1.74
COPB1-210ENST00000533533 K7ERU9 68 aa4.17□□□□□ -1.74
COPB1-210ENST00000533533 CYP4F30PQ9H0H9 118 aa4.17□□□□□ -1.74
COPB1-210ENST00000533533 ATOX1O00244 68 aa4.16□□□□□ -1.74
COPB1-210ENST00000533533 SCGB1A1P11684 91 aa4.16□□□□□ -1.74
COPB1-210ENST00000533533 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
COPB1-210ENST00000533533 MP68P56378 58 aa4.14□□□□□ -1.75
COPB1-210ENST00000533533 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
COPB1-210ENST00000533533 S4R3F8 94 aa4.13□□□□□ -1.75
COPB1-210ENST00000533533 MT-ATP8P03928 68 aa4.12□□□□□ -1.75
COPB1-210ENST00000533533 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
COPB1-210ENST00000533533 OCR1Q9BZK8 76 aa4.12□□□□□ -1.75
COPB1-210ENST00000533533 LCA10Q71F78 164 aa4.09□□□□□ -1.75
COPB1-210ENST00000533533 IMUPQ9GZP8 106 aa4.09□□□□□ -1.75
COPB1-210ENST00000533533 CSAG1Q6PB30 78 aa4.08□□□□□ -1.76
COPB1-210ENST00000533533 FAM236AA0A1B0GUQ0 79 aa4.07□□□□□ -1.76
COPB1-210ENST00000533533 FAM236BA0A1B0GV22 79 aa4.07□□□□□ -1.76
COPB1-210ENST00000533533 KLKP1Q107X0 134 aa4.07□□□□□ -1.76
COPB1-210ENST00000533533 NEBP20929 6669 aa4.06□□□□□ -1.76
COPB1-210ENST00000533533 H3BPC8 53 aa4.05□□□□□ -1.76
COPB1-210ENST00000533533 SMIM20Q8N5G0 67 aa4.03□□□□□ -1.76
COPB1-210ENST00000533533 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
COPB1-210ENST00000533533 A8MUN3 132 aa4.02□□□□□ -1.77
COPB1-210ENST00000533533 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
COPB1-210ENST00000533533 NDUFC1O43677 76 aa4.01□□□□□ -1.77
COPB1-210ENST00000533533 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
COPB1-210ENST00000533533 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
COPB1-210ENST00000533533 A6NN06 94 aa3.96□□□□□ -1.78
COPB1-210ENST00000533533 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
COPB1-210ENST00000533533 SNURFQ9Y675 71 aa3.96□□□□□ -1.78
COPB1-210ENST00000533533 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
COPB1-210ENST00000533533 C20orf197Q8N268 126 aa3.93□□□□□ -1.78
COPB1-210ENST00000533533 MT1BP07438 61 aa3.92□□□□□ -1.78
COPB1-210ENST00000533533 SERP2Q8N6R1 65 aa3.92□□□□□ -1.78
COPB1-210ENST00000533533 ACYP2P14621 99 aa3.91□□□□□ -1.78
COPB1-210ENST00000533533 ADM2Q7Z4H4 148 aa3.91□□□□□ -1.78
COPB1-210ENST00000533533 Q5VV11 94 aa3.9□□□□□ -1.79
COPB1-210ENST00000533533 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
COPB1-210ENST00000533533 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
COPB1-210ENST00000533533 KMT2DO14686 5537 aa3.89□□□□□ -1.79
COPB1-210ENST00000533533 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
COPB1-210ENST00000533533 H0YAA0 97 aa3.87□□□□□ -1.79
COPB1-210ENST00000533533 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
COPB1-210ENST00000533533 SPRR2GQ9BYE4 73 aa3.87□□□□□ -1.79
COPB1-210ENST00000533533 CRIPTQ9P021 101 aa3.86□□□□□ -1.79
COPB1-210ENST00000533533 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
COPB1-210ENST00000533533 SPTSSBQ8NFR3 76 aa3.85□□□□□ -1.79
COPB1-210ENST00000533533 COX7CP15954 63 aa3.84□□□□□ -1.79
COPB1-210ENST00000533533 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
COPB1-210ENST00000533533 P0C880 135 aa3.81□□□□□ -1.8
COPB1-210ENST00000533533 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
COPB1-210ENST00000533533 ANAPC13Q9BS18 74 aa3.8□□□□□ -1.8
COPB1-210ENST00000533533 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
COPB1-210ENST00000533533 R4GN34 69 aa3.8□□□□□ -1.8
COPB1-210ENST00000533533 M0QZ58 72 aa3.78□□□□□ -1.8
COPB1-210ENST00000533533 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
COPB1-210ENST00000533533 LINC01554Q52M75 96 aa3.76□□□□□ -1.81
COPB1-210ENST00000533533 COA5Q86WW8 74 aa3.76□□□□□ -1.81
COPB1-210ENST00000533533 H7BZZ5 65 aa3.74□□□□□ -1.81
COPB1-210ENST00000533533 CYSTM1Q9H1C7 97 aa3.74□□□□□ -1.81
COPB1-210ENST00000533533 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
COPB1-210ENST00000533533 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
COPB1-210ENST00000533533 CCDC179H3BU77 68 aa3.71□□□□□ -1.82
COPB1-210ENST00000533533 SPRR2EP22531 72 aa3.71□□□□□ -1.82
COPB1-210ENST00000533533 SPRR2BP35325 72 aa3.71□□□□□ -1.82
COPB1-210ENST00000533533 SPRR2AP35326 72 aa3.71□□□□□ -1.82
COPB1-210ENST00000533533 SEC61GP60059 68 aa3.68□□□□□ -1.82
COPB1-210ENST00000533533 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
COPB1-210ENST00000533533 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
COPB1-210ENST00000533533 SERP1Q9Y6X1 66 aa3.67□□□□□ -1.82
COPB1-210ENST00000533533 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
COPB1-210ENST00000533533 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
COPB1-210ENST00000533533 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
COPB1-210ENST00000533533 MT1XP80297 61 aa3.62□□□□□ -1.83
COPB1-210ENST00000533533 ATP5EP56381 51 aaPredicted RBP3.6□□□□□ -1.83
COPB1-210ENST00000533533 KRTAP13-4Q3LI77 160 aa3.6□□□□□ -1.83
COPB1-210ENST00000533533 SPRR2DP22532 72 aa3.59□□□□□ -1.83
COPB1-210ENST00000533533 A0A1B0GU69 56 aa3.58□□□□□ -1.84
COPB1-210ENST00000533533 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
COPB1-210ENST00000533533 A0A0D9SG42 100 aa3.57□□□□□ -1.84
COPB1-210ENST00000533533 A0A1B0GU33 70 aa3.57□□□□□ -1.84
COPB1-210ENST00000533533 TMEM258P61165 79 aa3.56□□□□□ -1.84
COPB1-210ENST00000533533 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
COPB1-210ENST00000533533 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
COPB1-210ENST00000533533 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
COPB1-210ENST00000533533 SVIPQ8NHG7 77 aa3.52□□□□□ -1.85
COPB1-210ENST00000533533 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
COPB1-210ENST00000533533 SMIM26A0A096LP01 95 aa3.48□□□□□ -1.85
COPB1-210ENST00000533533 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms