RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 HSPG2P98160 4391 aa7.87□□□□□ -1.15
CAPN1-224ENST00000533129 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
CAPN1-224ENST00000533129 RYR1P21817 5038 aa7.87□□□□□ -1.15
CAPN1-224ENST00000533129 COX6B2Q6YFQ2 88 aa7.83□□□□□ -1.16
CAPN1-224ENST00000533129 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
CAPN1-224ENST00000533129 KRTAP17-1Q9BYP8 105 aa7.76□□□□□ -1.17
CAPN1-224ENST00000533129 EPPK1P58107 5090 aaKnown RBP7.75□□□□□ -1.17
CAPN1-224ENST00000533129 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
CAPN1-224ENST00000533129 CRIPTQ9P021 101 aa7.73□□□□□ -1.17
CAPN1-224ENST00000533129 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
CAPN1-224ENST00000533129 FLG2Q5D862 2391 aaPredicted RBP7.68□□□□□ -1.18
CAPN1-224ENST00000533129 TNXBP22105 4242 aa7.67□□□□□ -1.18
CAPN1-224ENST00000533129 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
CAPN1-224ENST00000533129 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
CAPN1-224ENST00000533129 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.18
CAPN1-224ENST00000533129 P0C880 135 aa7.63□□□□□ -1.19
CAPN1-224ENST00000533129 MT1HL1P0DM35 61 aa7.62□□□□□ -1.19
CAPN1-224ENST00000533129 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
CAPN1-224ENST00000533129 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
CAPN1-224ENST00000533129 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
CAPN1-224ENST00000533129 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
CAPN1-224ENST00000533129 A0A0D9SG42 100 aa7.55□□□□□ -1.2
CAPN1-224ENST00000533129 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
CAPN1-224ENST00000533129 MYCBP2O75592 4640 aa7.52□□□□□ -1.21
CAPN1-224ENST00000533129 S4R3F8 94 aa7.51□□□□□ -1.21
CAPN1-224ENST00000533129 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
CAPN1-224ENST00000533129 BIRC6Q9NR09 4857 aa7.46□□□□□ -1.22
CAPN1-224ENST00000533129 DMBT1Q9UGM3 2413 aaPredicted RBP7.45□□□□□ -1.22
CAPN1-224ENST00000533129 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
CAPN1-224ENST00000533129 XP32Q5T750 250 aa7.4□□□□□ -1.23
CAPN1-224ENST00000533129 HERC2O95714 4834 aa7.4□□□□□ -1.23
CAPN1-224ENST00000533129 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
CAPN1-224ENST00000533129 KRTAP15-1Q3LI76 137 aa7.39□□□□□ -1.23
CAPN1-224ENST00000533129 ABCA13Q86UQ4 5058 aa7.37□□□□□ -1.23
CAPN1-224ENST00000533129 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
CAPN1-224ENST00000533129 NDUFAF8A1L188 74 aa7.28□□□□□ -1.24
CAPN1-224ENST00000533129 LUZP6Q538Z0 58 aa7.26□□□□□ -1.25
CAPN1-224ENST00000533129 M0QZ58 72 aa7.25□□□□□ -1.25
CAPN1-224ENST00000533129 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
CAPN1-224ENST00000533129 LPAP08519 4548 aa7.11□□□□□ -1.27
CAPN1-224ENST00000533129 LRP2P98164 4655 aa7.11□□□□□ -1.27
CAPN1-224ENST00000533129 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
CAPN1-224ENST00000533129 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
CAPN1-224ENST00000533129 R4GN34 69 aa6.97□□□□□ -1.29
CAPN1-224ENST00000533129 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
CAPN1-224ENST00000533129 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
CAPN1-224ENST00000533129 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.3
CAPN1-224ENST00000533129 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.3
CAPN1-224ENST00000533129 HERC1Q15751 4861 aa6.9□□□□□ -1.3
CAPN1-224ENST00000533129 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
CAPN1-224ENST00000533129 PP632Q6XCG6 107 aa6.78□□□□□ -1.32
CAPN1-224ENST00000533129 LCE2CQ5TA81 110 aa6.77□□□□□ -1.33
CAPN1-224ENST00000533129 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
CAPN1-224ENST00000533129 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
CAPN1-224ENST00000533129 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
CAPN1-224ENST00000533129 MUC2Q02817 5179 aa6.62□□□□□ -1.35
CAPN1-224ENST00000533129 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
CAPN1-224ENST00000533129 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
CAPN1-224ENST00000533129 RNF213Q63HN8 5207 aa6.52□□□□□ -1.37
CAPN1-224ENST00000533129 LCE2BO14633 110 aa6.51□□□□□ -1.37
CAPN1-224ENST00000533129 TNP1P09430 55 aa6.46□□□□□ -1.37
CAPN1-224ENST00000533129 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
CAPN1-224ENST00000533129 MT1HP80294 61 aa6.4□□□□□ -1.38
CAPN1-224ENST00000533129 M0R2T5 61 aa6.36□□□□□ -1.39
CAPN1-224ENST00000533129 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
CAPN1-224ENST00000533129 MT2AP02795 61 aa6.18□□□□□ -1.42
CAPN1-224ENST00000533129 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
CAPN1-224ENST00000533129 MT1FP04733 61 aa6.15□□□□□ -1.42
CAPN1-224ENST00000533129 SPRR2GQ9BYE4 73 aa6.15□□□□□ -1.43
CAPN1-224ENST00000533129 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
CAPN1-224ENST00000533129 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
CAPN1-224ENST00000533129 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
CAPN1-224ENST00000533129 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
CAPN1-224ENST00000533129 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
CAPN1-224ENST00000533129 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
CAPN1-224ENST00000533129 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
CAPN1-224ENST00000533129 INE1O15225 51 aa5.92□□□□□ -1.46
CAPN1-224ENST00000533129 MT1BP07438 61 aa5.85□□□□□ -1.47
CAPN1-224ENST00000533129 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
CAPN1-224ENST00000533129 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
CAPN1-224ENST00000533129 MT1XP80297 61 aa5.75□□□□□ -1.49
CAPN1-224ENST00000533129 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
CAPN1-224ENST00000533129 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
CAPN1-224ENST00000533129 USH2AO75445 5202 aa5.55□□□□□ -1.52
CAPN1-224ENST00000533129 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.53
CAPN1-224ENST00000533129 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
CAPN1-224ENST00000533129 KRTAP19-6Q3LI70 58 aa5.39□□□□□ -1.55
CAPN1-224ENST00000533129 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
CAPN1-224ENST00000533129 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
CAPN1-224ENST00000533129 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
CAPN1-224ENST00000533129 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
CAPN1-224ENST00000533129 KRTAP2-4Q9BYR9 128 aa5.23□□□□□ -1.57
CAPN1-224ENST00000533129 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
CAPN1-224ENST00000533129 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
CAPN1-224ENST00000533129 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
CAPN1-224ENST00000533129 KRTAP9-2Q9BYQ4 174 aa5.15□□□□□ -1.58
CAPN1-224ENST00000533129 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
CAPN1-224ENST00000533129 KMT2DO14686 5537 aa5.13□□□□□ -1.59
CAPN1-224ENST00000533129 KRTAP19-7Q3SYF9 63 aa5.12□□□□□ -1.59
CAPN1-224ENST00000533129 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms