RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 KIAA1109Q2LD37 5005 aa7.82□□□□□ -1.16
SSH3-210ENST00000532881 Q5VSD8 79 aa7.79□□□□□ -1.16
SSH3-210ENST00000532881 A0A1B0GU33 70 aa7.76□□□□□ -1.17
SSH3-210ENST00000532881 RYR1P21817 5038 aa7.76□□□□□ -1.17
SSH3-210ENST00000532881 COX6B2Q6YFQ2 88 aa7.75□□□□□ -1.17
SSH3-210ENST00000532881 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
SSH3-210ENST00000532881 CSAG1Q6PB30 78 aa7.71□□□□□ -1.17
SSH3-210ENST00000532881 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
SSH3-210ENST00000532881 XP32Q5T750 250 aa7.68□□□□□ -1.18
SSH3-210ENST00000532881 LRP2P98164 4655 aa7.68□□□□□ -1.18
SSH3-210ENST00000532881 EPPK1P58107 5090 aaKnown RBP7.67□□□□□ -1.18
SSH3-210ENST00000532881 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
SSH3-210ENST00000532881 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
SSH3-210ENST00000532881 ABCA13Q86UQ4 5058 aa7.63□□□□□ -1.19
SSH3-210ENST00000532881 CRIPTQ9P021 101 aa7.63□□□□□ -1.19
SSH3-210ENST00000532881 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.2
SSH3-210ENST00000532881 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
SSH3-210ENST00000532881 MT1HL1P0DM35 61 aa7.57□□□□□ -1.2
SSH3-210ENST00000532881 A0A0D9SG42 100 aa7.57□□□□□ -1.2
SSH3-210ENST00000532881 LINC01554Q52M75 96 aa7.56□□□□□ -1.2
SSH3-210ENST00000532881 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
SSH3-210ENST00000532881 S4R3F8 94 aa7.52□□□□□ -1.21
SSH3-210ENST00000532881 P0C880 135 aa7.51□□□□□ -1.21
SSH3-210ENST00000532881 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
SSH3-210ENST00000532881 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
SSH3-210ENST00000532881 K7ERS5 55 aa7.38□□□□□ -1.23
SSH3-210ENST00000532881 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
SSH3-210ENST00000532881 ROMO1P60602 79 aa7.29□□□□□ -1.24
SSH3-210ENST00000532881 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
SSH3-210ENST00000532881 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
SSH3-210ENST00000532881 SPINT4Q6UDR6 99 aa7.26□□□□□ -1.25
SSH3-210ENST00000532881 MUC2Q02817 5179 aa7.26□□□□□ -1.25
SSH3-210ENST00000532881 MUC17Q685J3 4493 aa7.21□□□□□ -1.25
SSH3-210ENST00000532881 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
SSH3-210ENST00000532881 KRTAP4-1Q9BYQ7 146 aa7.16□□□□□ -1.26
SSH3-210ENST00000532881 HERC2O95714 4834 aa7.15□□□□□ -1.26
SSH3-210ENST00000532881 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
SSH3-210ENST00000532881 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
SSH3-210ENST00000532881 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
SSH3-210ENST00000532881 M0QZ58 72 aa7.08□□□□□ -1.28
SSH3-210ENST00000532881 PCLOQ9Y6V0 5065 aa7.03□□□□□ -1.28
SSH3-210ENST00000532881 J3QL48 77 aa7.02□□□□□ -1.29
SSH3-210ENST00000532881 R4GN34 69 aa7.01□□□□□ -1.29
SSH3-210ENST00000532881 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
SSH3-210ENST00000532881 HERC1Q15751 4861 aa6.97□□□□□ -1.29
SSH3-210ENST00000532881 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
SSH3-210ENST00000532881 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
SSH3-210ENST00000532881 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
SSH3-210ENST00000532881 FLGP20930 4061 aaPredicted RBP6.76□□□□□ -1.33
SSH3-210ENST00000532881 RNF213Q63HN8 5207 aa6.73□□□□□ -1.33
SSH3-210ENST00000532881 HMCN2Q8NDA2 5059 aa6.73□□□□□ -1.33
SSH3-210ENST00000532881 NDUFAF8A1L188 74 aa6.68□□□□□ -1.34
SSH3-210ENST00000532881 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
SSH3-210ENST00000532881 UBR4Q5T4S7 5183 aa6.61□□□□□ -1.35
SSH3-210ENST00000532881 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
SSH3-210ENST00000532881 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
SSH3-210ENST00000532881 M0R2T5 61 aa6.43□□□□□ -1.38
SSH3-210ENST00000532881 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
SSH3-210ENST00000532881 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
SSH3-210ENST00000532881 MT1HP80294 61 aa6.34□□□□□ -1.39
SSH3-210ENST00000532881 TNP1P09430 55 aa6.33□□□□□ -1.4
SSH3-210ENST00000532881 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
SSH3-210ENST00000532881 MT1FP04733 61 aa6.28□□□□□ -1.4
SSH3-210ENST00000532881 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
SSH3-210ENST00000532881 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
SSH3-210ENST00000532881 MT2AP02795 61 aa6.24□□□□□ -1.41
SSH3-210ENST00000532881 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
SSH3-210ENST00000532881 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
SSH3-210ENST00000532881 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
SSH3-210ENST00000532881 USH2AO75445 5202 aa6.04□□□□□ -1.44
SSH3-210ENST00000532881 MT1BP07438 61 aa6.03□□□□□ -1.44
SSH3-210ENST00000532881 KRTAP10-5P60370 271 aa6□□□□□ -1.45
SSH3-210ENST00000532881 MT1XP80297 61 aa5.99□□□□□ -1.45
SSH3-210ENST00000532881 KRTAP19-8Q3LI54 63 aa5.97□□□□□ -1.45
SSH3-210ENST00000532881 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
SSH3-210ENST00000532881 KMT2DO14686 5537 aa5.93□□□□□ -1.46
SSH3-210ENST00000532881 KRTAP9-3Q9BYQ3 159 aa5.91□□□□□ -1.46
SSH3-210ENST00000532881 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.46
SSH3-210ENST00000532881 KRTAP8-1Q8IUC2 63 aa5.83□□□□□ -1.48
SSH3-210ENST00000532881 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
SSH3-210ENST00000532881 LCE2BO14633 110 aa5.77□□□□□ -1.49
SSH3-210ENST00000532881 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
SSH3-210ENST00000532881 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
SSH3-210ENST00000532881 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
SSH3-210ENST00000532881 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
SSH3-210ENST00000532881 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
SSH3-210ENST00000532881 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
SSH3-210ENST00000532881 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
SSH3-210ENST00000532881 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
SSH3-210ENST00000532881 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
SSH3-210ENST00000532881 SSPOA2VEC9 5147 aa5.4□□□□□ -1.55
SSH3-210ENST00000532881 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
SSH3-210ENST00000532881 KRTAP19-7Q3SYF9 63 aa5.34□□□□□ -1.55
SSH3-210ENST00000532881 INE1O15225 51 aa5.21□□□□□ -1.57
SSH3-210ENST00000532881 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
SSH3-210ENST00000532881 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
SSH3-210ENST00000532881 MT1EP04732 61 aa5.15□□□□□ -1.59
SSH3-210ENST00000532881 MT1LQ93083 61 aa5.15□□□□□ -1.59
SSH3-210ENST00000532881 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
SSH3-210ENST00000532881 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms